EY674853

Overview
NameEY674853
Unique NameEY674853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1000
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 9.048e-17
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  164 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTE 490
            +F E+F +TW +   +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y     P   E        ET +  +  +   ++A GKG +  +
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTN--VFAQGKGNREQQ 132          

HSP 2 Score: 27.335 bits (59), Expect = 9.048e-17
Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = 3
Query:  471 KAKKEQRMNLWFCPCLQLSTFTLISWEP 554
            K  +EQ+  LWF P     T++L+ W P
Sbjct:  126 KGNREQQFYLWFDPTKNFHTYSLV-WRP 152          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.987e-16
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 2
Query:  161 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTE 490
            + F ++F +TW D   +   GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y         E        ET +  +  +   ++A GKG++  +
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTN--VFAQGKGDREQQ 133          

HSP 2 Score: 26.1794 bits (56), Expect = 1.987e-16
Identity = 10/28 (35.71%), Postives = 16/28 (57.14%), Query Frame = 3
Query:  471 KAKKEQRMNLWFCPCLQLSTFTLISWEP 554
            K  +EQ+  LWF P     T++++ W P
Sbjct:  127 KGDREQQFYLWFDPTKNFHTYSIV-WRP 153          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.402e-16
Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  164 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFP 373
            +F +D ++ W D   + ++  G  + L LD+ SG GF S +++L+G+V +++KLVPG+SAGTVT FY + P
Sbjct:   28 SFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSP 98          

HSP 2 Score: 33.4982 bits (75), Expect = 3.402e-16
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  391 DELDFEFLGNRTGQPYPVQT 450
            DE+DFEFLGN +G PY + T
Sbjct:  103 DEIDFEFLGNISGHPYTLHT 122          

HSP 3 Score: 27.7202 bits (60), Expect = 3.402e-16
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  480 KEQRMNLWFCPCLQLSTFTLISWEP 554
            KEQ+ +LWF P +   T+ +I W P
Sbjct:  132 KEQQFHLWFDPTVDFHTYCII-WNP 155          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.402e-16
Identity = 29/71 (40.85%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  164 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFP 373
            +F +D ++ W D   + +   G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY + P
Sbjct:   28 SFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSP 98          

HSP 2 Score: 34.2686 bits (77), Expect = 3.402e-16
Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 1
Query:  391 DELDFEFLGNRTGQPYPVQTYYLCKWKRRKKNR 489
            DE+DFEFLGN +G PY + T    K    K+ +
Sbjct:  103 DEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQ 135          

HSP 3 Score: 27.335 bits (59), Expect = 3.402e-16
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  480 KEQRMNLWFCPCLQLSTFTLISWEP 554
            KEQ+ +LWF P +   T+  I+W P
Sbjct:  132 KEQQFHLWFDPTVNFHTY-CITWNP 155          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.404e-16
Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  164 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFP 373
            +F +D K+ W D   +  +  G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY + P
Sbjct:   23 SFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSP 93          

HSP 2 Score: 33.8834 bits (76), Expect = 3.404e-16
Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 1
Query:  391 DELDFEFLGNRTGQPYPVQTYYLCKWKRRKKNR 489
            DE+DFEFLGN +G PY + T    K    K+ +
Sbjct:   98 DEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQ 130          

HSP 3 Score: 26.5646 bits (57), Expect = 3.404e-16
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 3
Query:  480 KEQRMNLWFCPCLQLSTFTLISWEP 554
            KEQ+ +LWF P     T+  I+W P
Sbjct:  127 KEQQFHLWFDPTANFHTY-CITWNP 150          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.381e-16
Identity = 29/71 (40.85%), Postives = 48/71 (67.61%), Query Frame = 2
Query:  164 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFP 373
            +F +D ++ W D   +     G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY + P
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSP 98          

HSP 2 Score: 33.4982 bits (75), Expect = 7.381e-16
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  391 DELDFEFLGNRTGQPYPVQT 450
            DE+DFEFLGN +G PY + T
Sbjct:  103 DEIDFEFLGNISGHPYTLHT 122          

HSP 3 Score: 27.335 bits (59), Expect = 7.381e-16
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  480 KEQRMNLWFCPCLQLSTFTLISWEP 554
            KEQ+ +LWF P +   T+  I+W P
Sbjct:  132 KEQQFHLWFDPTVNFHTY-CITWNP 155          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.543e-15
Identity = 52/159 (32.70%), Postives = 82/159 (51.57%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY      +  E         T +  + ++   ++  GKG  R +   L        H Y+ L  T+ I+ F+ +   P R  K + +    FP N
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTN--VFTGGKG-NREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDD--VPIRAFKNSKDLGVKFPFN 186          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.491e-15
Identity = 55/159 (34.59%), Postives = 80/159 (50.31%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY      +  E         T +  + ++   ++  GKG+ R +   L        H Y+ L   + I+ ++ +   P R  K + +    FP N
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTN--VFTGGKGD-REQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDY--PIRVFKNSNDLGVKFPFN 184          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.491e-15
Identity = 58/162 (35.80%), Postives = 78/162 (48.15%), Query Frame = 2
Query:  161 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSL-ILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            A F  D ++TW D   +    G  + L LD++SG GF SK +YLFG+VSM++KLVPG+SAGTVT  Y + P     E     L +   E   L  +   +Y  GKG+K  + + L     A  H YT L     I+  +     P R  K        FP N
Sbjct:   21 ANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTN---VYTQGKGDKEQQFK-LWFDPTANFHTYTILWNPQRIIFTVDGT--PIREFKNMESLGTLFPKN 176          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.706e-14
Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY      +  E         T +  + ++   ++  GKG+ R +   L        H Y+ L   + I+ F+ E   P R  K + +    FP +
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTN--VFTGGKGD-REQRIYLWFDPTKEYHRYSILWNLYQIVFFVDE--VPIRVFKNSKDLGVKFPFD 186          
The following BLAST results are available for this feature:
BLAST of EY674853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
XTH16_ARATH9.048e-1738.53Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH1.987e-1638.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH3.402e-1642.25Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH18_ARATH3.402e-1640.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH3.404e-1642.25Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH7.381e-1640.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.543e-1532.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN4.491e-1534.59Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH4.491e-1535.80Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN1.706e-1434.59Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-D02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674853 ID=EY674853; Name=EY674853; organism=Citrus sinensis; type=EST; length=1000bp
CATAACCCTACATATCCCCTTTAGATCTCTTTCTAATTAGTAACAGATAA
TATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATGCA
ATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTT
AGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATG
CCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGAC
CAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAGTACTTGTTCGGGCG
TGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCA
CTGCCTTTTATTATGAATTCCCAACACCGAAAATGTGAGAGACGAGCTTG
ATTTTGAGTTCCTGGGAAACCGAACGGGTCAACCTTACCCGGTCCAAACC
TATTATCTATGCAAATGGAAAAGGCGAAAAAAGAACAGAGAATGAACCTC
TGGTTTTGCCCCTGCTTGCAATTATCCACCTTTACACTAATCTCCTGGGA
ACCTTCTCCATTTTGGCTTTCCTAGGGGAAAGAATGGGCCCACCCAGGGG
TTTAAAAAAAACAATGGAAAGGGCTCCCTTTTTCCCAATGAACCCCACCC
CATGGGGGGGGAGATCCAACCTCATGGAGAATTCCAAATAACTGGGGCAA
CAAAAAGTGGGATCTATATAAAAAAATAATTGGGAACAAAAAACCCCCCT
TTTTTTATCTTAATTTCACAAAAAATTTTTAAATATAAAAAGGGGTACCC
CAAAATTCACTTGACACAAAAATAAAAGTGTGGGCCCTCACAAAAACCAG
AGGTTGTAATTGGGGGGGGGAGAGGCAAAATAATAATTTTATTCAACCCC
CTCCCTTCCCTCACCCAATGAGGGACGGACAAACTAAAAATAAAAATAAA
ACGAAAGAGTTGGGGGTATACTGACTCTCCTTTAACCCCCCTCTAACATG
back to top