EY674853

Overview
NameEY674853
Unique NameEY674853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1000
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.965e-14
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY      +  E         T +  + ++   +++ GKG+ R +   L        H Y+ L   + I  F+ +   P R  K + +    +P +
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTN--VFSGGKGD-REQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDT--PIRVFKNSKDLGVRYPFD 185          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.889e-14
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 2
Query:  164 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFY 361
            TF +++ VTW  +H+  +  G  + L +DQ+SG GF SK  Y  G   M+IK+  G++ G VTAFY
Sbjct:   34 TFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFY 99          

HSP 2 Score: 33.8834 bits (76), Expect = 5.889e-14
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 1
Query:  391 DELDFEFLGNRTGQPYPVQTYYLCKWKRRKKNR 489
            DE+DFEFLGN  G+P  +QT      +  ++ R
Sbjct:  108 DEIDFEFLGNNNGKPVTLQTNLFLNGEGNREER 140          

HSP 3 Score: 23.8682 bits (50), Expect = 5.889e-14
Identity = 10/28 (35.71%), Postives = 15/28 (53.57%), Query Frame = 3
Query:  471 KAKKEQRMNLWFCPCLQLSTFTLISWEP 554
            +  +E+R  LWF P     T+ L+ W P
Sbjct:  134 EGNREERFLLWFNPTKHYHTYGLL-WNP 160          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.617e-14
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 2
Query:  161 ATFLEDFKVTWSDAHLRQIEGG---RAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFY 361
            A F E F V  +  H+R +      + + L LD++SG GF SK  YLFG  S+++KLV G+SAGTVT+FY
Sbjct:   26 AGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFY 95          

HSP 2 Score: 30.4166 bits (67), Expect = 7.617e-14
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  391 DELDFEFLGNRTGQPYPVQT 450
            DE+D EF+GN +G PY + T
Sbjct:  105 DEIDIEFMGNLSGNPYVMNT 124          

HSP 3 Score: 25.7942 bits (55), Expect = 7.617e-14
Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = 3
Query:  477 KKEQRMNLWFCPCLQLSTFTLISWEP 554
            KKE +  LWF P     T+ +I W P
Sbjct:  133 KKEHQFYLWFDPTADFHTYKII-WNP 157          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.445e-13
Identity = 63/198 (31.82%), Postives = 91/198 (45.96%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMNPTPWGGRSNLMENSK*LGQQKVGSI*KNNWEQKTPLFLS 760
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY      +  E         T +  + ++   ++  G G  R +   L        H Y+ L   + I+ F+ +   P R  K + +    FP N  P    S+L        +   G + K NWE K P   S
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTN--VFTGGAG-NREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDD--VPIRVFKNSKDVGVKFPFN-QPMKIYSSLWNADDWATR---GGLEKTNWE-KAPFVAS 219          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.445e-13
Identity = 55/164 (33.54%), Postives = 76/164 (46.34%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPII-----YANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F +D  +TW D     +  G  + L LDQ+SG GF SK +YL+G+V M+IKLVPG+SAGTVT FY +          L     + E +      P I     Y  GKG+ R +   L     A  H Y+ L     I+ ++  +  P R  K        +P N
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLK-------SQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGD-REQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGK--PIREFKNLEVLGVAYPKN 181          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.887e-13
Identity = 55/159 (34.59%), Postives = 78/159 (49.06%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F  ++  TW+  H++   GG  IQL LD+ +G GF +K  YLFG  SM IK+VPGDSAGTVTAF       +  E         T +  + ++   ++  GKG+ R +   L        H Y+ L   + I+ FL + + P R  K   E    FP N
Sbjct:   32 FGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTN--VFTGGKGD-REQRIYLWFDPTKAYHRYSVLWNMYQIV-FLVDNI-PIRVFKNLKELGVKFPFN 185          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.887e-13
Identity = 54/162 (33.33%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  161 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSL-ILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            A F  D  V W +   + +  G+ + L LD++SG GF SK +YLFG++ M+IKLVPG+SAGTVT FY +       E     L +   +   L  +   +Y  GKG+K  +   L     A  H Y+ L     I+  + +   P R  K        FP N
Sbjct:   22 ADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTN---VYTQGKGDKEQQFH-LWFDPTANFHTYSILWNPQRIILTVDDT--PIREFKNYESLGVLFPKN 177          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.489e-13
Identity = 52/159 (32.70%), Postives = 75/159 (47.17%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F  ++  TW+  H +Q+ GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY      +  E         T +  + ++   ++  GKG  R +   L        H Y+ L   + I+ F+     P R  K   +    FP N
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPVILQTN--VFTGGKG-NREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNI--PIRVFKNAKDLGVRFPFN 187          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.489e-13
Identity = 52/159 (32.70%), Postives = 74/159 (46.54%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSLILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            F  ++  TW+  H +Q  GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY      +  E         T +  + ++   ++  GKG  R +   L        H Y+ L   + I+ F+     P R  K   +    FP N
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPAILQTN--VFTGGKG-NREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNI--PIRTFKNAKDLGVRFPFN 188          
BLAST of EY674853 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.489e-13
Identity = 53/162 (32.72%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  161 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYYEFPTPKM*ETSL-ILSSWETERVNLTRSKPIIYANGKGEKRTENEPLVLPLLAIIHLYTNLLGTFSILAFLGERMGPPRGLKKTMERAPFFPMN 643
            A F  D ++TW D   +    G  + L LD+ SG GF SK +YLFG++ M+IKLV G+SAGTVTA+Y + P     E     L +   +   L  +   ++  GKG+ R +   L     +  H Y+ L     I+  +     P R  K    +   FP N
Sbjct:   24 ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTN---VFTQGKGD-REQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGT--PIREFKNMESQGTLFPKN 179          
The following BLAST results are available for this feature:
BLAST of EY674853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
XTH_WHEAT4.965e-1432.08Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH5.889e-1442.42Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH8_ORYSJ7.617e-1447.14Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH5_ARATH1.445e-1331.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH1.445e-1333.54Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN1.887e-1334.59Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.887e-1333.33Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_BRAOB5.489e-1332.70Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH4_ARATH5.489e-1332.70Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH5.489e-1332.72Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-D02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674853 ID=EY674853; Name=EY674853; organism=Citrus sinensis; type=EST; length=1000bp
CATAACCCTACATATCCCCTTTAGATCTCTTTCTAATTAGTAACAGATAA
TATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATGCA
ATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTT
AGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATG
CCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGAC
CAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAGTACTTGTTCGGGCG
TGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCA
CTGCCTTTTATTATGAATTCCCAACACCGAAAATGTGAGAGACGAGCTTG
ATTTTGAGTTCCTGGGAAACCGAACGGGTCAACCTTACCCGGTCCAAACC
TATTATCTATGCAAATGGAAAAGGCGAAAAAAGAACAGAGAATGAACCTC
TGGTTTTGCCCCTGCTTGCAATTATCCACCTTTACACTAATCTCCTGGGA
ACCTTCTCCATTTTGGCTTTCCTAGGGGAAAGAATGGGCCCACCCAGGGG
TTTAAAAAAAACAATGGAAAGGGCTCCCTTTTTCCCAATGAACCCCACCC
CATGGGGGGGGAGATCCAACCTCATGGAGAATTCCAAATAACTGGGGCAA
CAAAAAGTGGGATCTATATAAAAAAATAATTGGGAACAAAAAACCCCCCT
TTTTTTATCTTAATTTCACAAAAAATTTTTAAATATAAAAAGGGGTACCC
CAAAATTCACTTGACACAAAAATAAAAGTGTGGGCCCTCACAAAAACCAG
AGGTTGTAATTGGGGGGGGGAGAGGCAAAATAATAATTTTATTCAACCCC
CTCCCTTCCCTCACCCAATGAGGGACGGACAAACTAAAAATAAAAATAAA
ACGAAAGAGTTGGGGGTATACTGACTCTCCTTTAACCCCCCTCTAACATG
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