EY674849

Overview
NameEY674849
Unique NameEY674849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.686e-25
Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  106 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            P   A+TCGQVTA LAPC+P+L+  GR P   CC GV++L G+A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTD
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTD 109          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.732e-25
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            A+T GQVT SLAPCI +LR +G    PP CC+G++SLN AA+TTP RQAAC C+K A   I GI   +A+GLP +CGV IPYKISPSTD
Sbjct:   27 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTD 115          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.732e-25
Identity = 56/92 (60.87%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  106 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            P   A+TCGQVTA LAPC+P+L+  GR P   CC GV+ L G+A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTD
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTD 109          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.732e-25
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            A+T GQVT SLAPCI +LR +G    PP CC+G++SLN AA+TTP RQAAC C+K A   I GI   +A+GLP +CGV IPYKISPSTD
Sbjct:   23 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTD 111          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.541e-24
Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            A+TCGQV++++ PC+ + R  G  P   CCSGVRSLN AARTT DR+AACNCLK A   IRG+    AA +PS+CGV IPY IS STD
Sbjct:   30 AVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTD 117          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.660e-24
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CGQV +++APCI + R  G  P   CCSGVRSLN AARTT DR+AACNCLK A   + G+    AA +PS+CGV IPY IS STD
Sbjct:   28 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTD 115          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.660e-24
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CG VT+ L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS ST+
Sbjct:   18 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTN 104          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.660e-24
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CG V+ +L PC+ +L+ GG  P P CC GV+ LNGAARTT DR+AACNCLK + G+I G+KP   A LP +CGVR+PY IS ST+
Sbjct:   26 AISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTN 112          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.655e-24
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CG VT+ L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS ST+
Sbjct:   26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTN 112          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.261e-23
Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CG VT+ L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS +T+
Sbjct:   26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTN 112          
The following BLAST results are available for this feature:
BLAST of EY674849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP1_SOLLC6.686e-2560.87Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
NLTP2_GOSHI8.732e-2562.92Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP1_SOLPN8.732e-2560.87Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
NLTP1_GOSHI8.732e-2562.92Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP2_SORBI2.541e-2460.23Non-specific lipid-transfer protein 2 OS=Sorghum b... [more]
NLTP_MAIZE5.660e-2460.23Non-specific lipid-transfer protein OS=Zea mays PE... [more]
NLTP4_LENCU5.660e-2461.36Non-specific lipid-transfer protein 4 (Fragment) O... [more]
NLTP1_LENCU5.660e-2459.09Non-specific lipid-transfer protein 1 OS=Lens culi... [more]
NLTP6_LENCU9.655e-2461.36Non-specific lipid-transfer protein 6 OS=Lens culi... [more]
NLTP2_LENCU1.261e-2360.23Non-specific lipid-transfer protein 2 OS=Lens culi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-C10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674849 ID=EY674849; Name=EY674849; organism=Citrus sinensis; type=EST; length=1051bp
CCACGCGTCCGCTAGCTATAACCAAGCACATTTCCTCCCTGAAGGATCCT
CATGGCTGCTCTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGA
CTGCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTTG
GCTCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTTCCTCCACCGCC
ATGCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAGAACCACCCCTG
ACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACAATCCGC
GGCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAATGTGGAGTCAG
AATTCCTTACAAGATCAGCCCCAGCACCGACTGGCTCTAGGGTCAGGTGA
AGTTGAGTTTGAGCTCTGTGACTTTCCAAGTATGATTGACTGAGAAGAAT
AAATAAATAAAGAATAATCTATGTTAATTTCTTTTGTCCGAACGAGTCTC
CACTTGTATGAGTTTCACTCTCATGTCATGGTTTGTATATTTGCTTTTTA
TGTCATATTAAAAATAAGGTAAACGCCAATCTGTGTTTTAAGTGATTAAT
TTATTATTTATTTTTTGGGGTTATTAAAAAAAAAAAAAGGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAGGGGGGGGCCGCCC
TCTTTAAAGGAATCCAAAGCTTTAAATTAACCCAGGGATTGAGAAGTTCA
AAACCCTCTTTTTTTTAGGGGCCCCCAAAATTTTAAATTTTCCTGGGCCG
CTCTTTTTAAAAACCTTCGGGGGAGGGGGAAAAAACCCTGGGGCTTAACC
CCAAATTTTAAATCCCTCCTGGGGAACAACATCCCCCCCTTTTCTTCCCC
AACGGGGAAGAATAAATAAAAAAAAAAAAGCGCCCCCCCGCACCAGATAA
TCCCCCCTTTTCCCCCAAAAAATATTTGCGCCCCACCACAACTAATGAGA
AAGGGGGGGAAAAAAGGGGGGAGAACAACCCACCCCGCCCCCTCTGTTAA
C
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