EY674849

Overview
NameEY674849
Unique NameEY674849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.173e-23
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  106 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            P   A++CGQV + LAPC+P+L+  GR P   CC GV+ L GAA++  DR+ AC CLK A   I+GI    AAGLP  CGV IPYKISPSTD
Sbjct:   20 PHAEALSCGQVQSGLAPCLPYLQ--GRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTD 109          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.067e-22
Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 1
Query:  121 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            +TCGQV  +LA CI FL+ GG   PP CC+GV+++  ++RTT DR+A C+CLK A G +RGI PN A  LP +CGV IPYKIS ST+
Sbjct:    1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTN 86          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.378e-22
Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CGQV++++A C+ + R  G  P   CCSGVRSLN AARTT DR+AACNCLK A   I G+    AA +PS+CGV +PY IS STD
Sbjct:   26 AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTD 113          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.106e-22
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:  109 VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            V  AI+CG V  SLAPC  +L  GG   PP CC+GV++LN  A+TTPDRQ AC C++    +I G+ P++A+GLP +CGV IPY IS ST+
Sbjct:   21 VDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTN 110          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.056e-22
Identity = 52/92 (56.52%), Postives = 61/92 (66.30%), Query Frame = 1
Query:  106 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            P   A+TCGQVT++LAPC+P+L   G  P   CC GV+ L G A+TT DRQ AC CLK A  +  G+    AA LPS C V IPYKISPSTD
Sbjct:   20 PHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTD 109          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.541e-21
Identity = 52/92 (56.52%), Postives = 61/92 (66.30%), Query Frame = 1
Query:  106 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            P   A+TCGQVT++LAPC+P+L   G  P   CC GV+ L G A+TT DRQAAC CLK A  +   +    AA LPS C V IPYKISPSTD
Sbjct:   20 PHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTD 109          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 2.013e-21
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
Query:  121 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            ITCG V++ LAPCI +L+ G       CC G+++LN AA TTPDR+ ACNCLK A   I+GI    AAGLP  CGV IPY ISPST+
Sbjct:   28 ITCGMVSSKLAPCIGYLKGGPL--GGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTN 112          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.629e-21
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CGQV+++L+PCI + R  G  PP  CCSGV+ L GAA++T D+QAAC C+K A G   G+    AAG+PS CGV +PY IS S D
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVD 110          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.434e-21
Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CGQV+++L+PCI + R  G  PP  CCSGV+ L GAA++T D+QAAC CLK    +I+GI     +G+P +CGV +P+ IS STD
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTD 113          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.434e-21
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CGQV+++L+PCI + R  G  PP  CCSGV+ L GAA++T D+QAAC C+K A G   G+    AAG+PS CGV +PY IS S D
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVD 110          
The following BLAST results are available for this feature:
BLAST of EY674849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP2_TOBAC8.173e-2356.52Non-specific lipid-transfer protein 2 OS=Nicotiana... [more]
NLTP1_PHAAU1.067e-2257.47Non-specific lipid-transfer protein 1 OS=Phaseolus... [more]
NLTP1_SORBI2.378e-2257.95Non-specific lipid-transfer protein 1 OS=Sorghum b... [more]
NLTP3_ARATH3.106e-2253.85Non-specific lipid-transfer protein 3 OS=Arabidops... [more]
NLTP2_SOLPN4.056e-2256.52Non-specific lipid-transfer protein 2 OS=Solanum p... [more]
NLTP2_SOLCI1.541e-2156.52Non-specific lipid-transfer protein 2 OS=Solanum c... [more]
NLTP_SPIOL2.013e-2157.47Non-specific lipid-transfer protein OS=Spinacia ol... [more]
NLT41_HORVU2.629e-2154.55Non-specific lipid-transfer protein 4.1 OS=Hordeum... [more]
NLTP3_HORVU3.434e-2152.27Non-specific lipid-transfer protein 3 OS=Hordeum v... [more]
NLT43_HORVU3.434e-2154.55Non-specific lipid-transfer protein 4.3 OS=Hordeum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-C10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674849 ID=EY674849; Name=EY674849; organism=Citrus sinensis; type=EST; length=1051bp
CCACGCGTCCGCTAGCTATAACCAAGCACATTTCCTCCCTGAAGGATCCT
CATGGCTGCTCTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGA
CTGCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTTG
GCTCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTTCCTCCACCGCC
ATGCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAGAACCACCCCTG
ACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACAATCCGC
GGCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAATGTGGAGTCAG
AATTCCTTACAAGATCAGCCCCAGCACCGACTGGCTCTAGGGTCAGGTGA
AGTTGAGTTTGAGCTCTGTGACTTTCCAAGTATGATTGACTGAGAAGAAT
AAATAAATAAAGAATAATCTATGTTAATTTCTTTTGTCCGAACGAGTCTC
CACTTGTATGAGTTTCACTCTCATGTCATGGTTTGTATATTTGCTTTTTA
TGTCATATTAAAAATAAGGTAAACGCCAATCTGTGTTTTAAGTGATTAAT
TTATTATTTATTTTTTGGGGTTATTAAAAAAAAAAAAAGGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAGGGGGGGGCCGCCC
TCTTTAAAGGAATCCAAAGCTTTAAATTAACCCAGGGATTGAGAAGTTCA
AAACCCTCTTTTTTTTAGGGGCCCCCAAAATTTTAAATTTTCCTGGGCCG
CTCTTTTTAAAAACCTTCGGGGGAGGGGGAAAAAACCCTGGGGCTTAACC
CCAAATTTTAAATCCCTCCTGGGGAACAACATCCCCCCCTTTTCTTCCCC
AACGGGGAAGAATAAATAAAAAAAAAAAAGCGCCCCCCCGCACCAGATAA
TCCCCCCTTTTCCCCCAAAAAATATTTGCGCCCCACCACAACTAATGAGA
AAGGGGGGGAAAAAAGGGGGGAGAACAACCCACCCCGCCCCCTCTGTTAA
C
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