EY674849

Overview
NameEY674849
Unique NameEY674849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.825e-14
Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  106 PVT-NAI-TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTD 381
            P+T NA+ +CG V  +LA CI +L  G       CC+GV +L   A TTPDRQ AC CL+ A   +  G+    AAGLPS C V IPYKIS ST+
Sbjct:   20 PITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTN 113          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.066e-14
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV---AAGLPSQCGVRIPYKISPSTD 381
            A++C  V A L PC+ ++  GG  P   CC+G+ +L   A+T+ DRQ  C C+K A G +  + P     A  LPS+CGV +PYK SPSTD
Sbjct:   20 AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLT-LSPRTIQNALELPSKCGVDLPYKFSPSTD 108          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.310e-14
Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTI--RGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+C  V A+L PC+ ++  GG  P   CC+G+R L+  A +  D+Q  C C+K   G +    I    AA LP +CGV++PYKI PST+
Sbjct:   23 AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTN 111          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.935e-14
Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI CG V + + PC+ +++ GG  P   CC GV++L+  AR+  DRQ+ACNCLK     I  +  + A  +P +CGV +PY IS + D
Sbjct:   23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNID 109          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.057e-14
Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            AI+CG VT SL  C  +L  GG F P  CCSGV+ LN  ARTT DRQ AC C++   RA G+   +    AA LP  C VRI Y IS  T+
Sbjct:   26 AISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTN 113          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.708e-12
Identity = 38/93 (40.86%), Postives = 49/93 (52.69%), Query Frame = 1
Query:  106 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVR-IPYKISPSTD 381
            PV  AI+C QV +++ PC  +L      P   CC  +R L+   + TPDRQA CNCLK       G+K   AA LP  C V  +   ISP+ D
Sbjct:   27 PVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLK-TQAKSYGVKLGKAANLPGLCKVTDLNVPISPNVD 118          
BLAST of EY674849 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.889e-11
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 1
Query:  121 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTD 381
            + CGQV  +L+ C+PFL      P   CC+GV  L   A T  D++ AC C+K A      I+ + A+ LP +CGV I   IS +T+
Sbjct:    1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTN 87          
The following BLAST results are available for this feature:
BLAST of EY674849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP2_ARATH1.825e-1449.47Non-specific lipid-transfer protein 2 OS=Arabidops... [more]
NLTP6_ARATH4.066e-1443.96Non-specific lipid-transfer protein 6 OS=Arabidops... [more]
NLTPA_ARATH5.310e-1442.22Non-specific lipid-transfer protein 10 OS=Arabidop... [more]
NLTP1_WHEAT6.935e-1442.05Non-specific lipid-transfer protein (Fragment) OS=... [more]
NLTP5_ARATH9.057e-1450.55Non-specific lipid-transfer protein 5 OS=Arabidops... [more]
NLTP_PINTA1.708e-1240.86Non-specific lipid-transfer protein OS=Pinus taeda... [more]
NLTPB_RICCO1.889e-1139.08Non-specific lipid-transfer protein B OS=Ricinus c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-C10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674849 ID=EY674849; Name=EY674849; organism=Citrus sinensis; type=EST; length=1051bp
CCACGCGTCCGCTAGCTATAACCAAGCACATTTCCTCCCTGAAGGATCCT
CATGGCTGCTCTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGA
CTGCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTTG
GCTCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTTCCTCCACCGCC
ATGCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAGAACCACCCCTG
ACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACAATCCGC
GGCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAATGTGGAGTCAG
AATTCCTTACAAGATCAGCCCCAGCACCGACTGGCTCTAGGGTCAGGTGA
AGTTGAGTTTGAGCTCTGTGACTTTCCAAGTATGATTGACTGAGAAGAAT
AAATAAATAAAGAATAATCTATGTTAATTTCTTTTGTCCGAACGAGTCTC
CACTTGTATGAGTTTCACTCTCATGTCATGGTTTGTATATTTGCTTTTTA
TGTCATATTAAAAATAAGGTAAACGCCAATCTGTGTTTTAAGTGATTAAT
TTATTATTTATTTTTTGGGGTTATTAAAAAAAAAAAAAGGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAGGGGGGGGCCGCCC
TCTTTAAAGGAATCCAAAGCTTTAAATTAACCCAGGGATTGAGAAGTTCA
AAACCCTCTTTTTTTTAGGGGCCCCCAAAATTTTAAATTTTCCTGGGCCG
CTCTTTTTAAAAACCTTCGGGGGAGGGGGAAAAAACCCTGGGGCTTAACC
CCAAATTTTAAATCCCTCCTGGGGAACAACATCCCCCCCTTTTCTTCCCC
AACGGGGAAGAATAAATAAAAAAAAAAAAGCGCCCCCCCGCACCAGATAA
TCCCCCCTTTTCCCCCAAAAAATATTTGCGCCCCACCACAACTAATGAGA
AAGGGGGGGAAAAAAGGGGGGAGAACAACCCACCCCGCCCCCTCTGTTAA
C
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