EY674839

Overview
NameEY674839
Unique NameEY674839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT2_XENLA (Actin, alpha sarcomeric/cardiac OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.602e-64
Identity = 120/144 (83.33%), Postives = 130/144 (90.28%), Query Frame = 2
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSL 430
            D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMF   ++  P  + AIQAVLSL
Sbjct:    3 DDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNV--PAMYVAIQAVLSL 144          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT2_LUMTE (Actin-2 OS=Lumbricus terrestris GN=ACT2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.602e-64
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--SPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVTHTVPI 166          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT1_ACACA (Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.602e-64
Identity = 129/173 (74.57%), Postives = 138/173 (79.77%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DEVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVTHTVPI 165          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTM_MOLOC (Actin, larval muscle-type OS=Molgula oculata PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64
Identity = 119/144 (82.64%), Postives = 130/144 (90.28%), Query Frame = 2
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSL 430
            + ED   +VCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELR+APEEHP LLTEAPLNPKANREKMTQIMF   ++  P  + AIQAVLSL
Sbjct:    4 EEEDQTAIVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRIAPEEHPTLLTEAPLNPKANREKMTQIMFETFNV--PAMYVAIQAVLSL 145          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTC_HELTI (Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVIDSGDGVTHTVPI 166          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTC_BIOTE (Actin, cytoplasmic OS=Biomphalaria tenagophila PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVTHTVPI 166          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVTHTVPI 166          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTC_BIOOB (Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVTHTVPI 166          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTC_BIOGL (Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 166          
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTC_BIOAL (Actin, cytoplasmic OS=Biomphalaria alexandrina PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 166          
The following BLAST results are available for this feature:
BLAST of EY674839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
ACT2_XENLA4.602e-6483.33Actin, alpha sarcomeric/cardiac OS=Xenopus laevis ... [more]
ACT2_LUMTE4.602e-6475.14Actin-2 OS=Lumbricus terrestris GN=ACT2 PE=2 SV=1[more]
ACT1_ACACA4.602e-6474.57Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1[more]
ACTM_MOLOC6.010e-6482.64Actin, larval muscle-type OS=Molgula oculata PE=3 ... [more]
ACTC_HELTI6.010e-6475.14Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1[more]
ACTC_BIOTE6.010e-6475.14Actin, cytoplasmic OS=Biomphalaria tenagophila PE=... [more]
ACTC_BIOPF6.010e-6475.14Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ... [more]
ACTC_BIOOB6.010e-6475.14Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 ... [more]
ACTC_BIOGL6.010e-6475.14Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 S... [more]
ACTC_BIOAL6.010e-6475.14Actin, cytoplasmic OS=Biomphalaria alexandrina PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-B12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674839 ID=EY674839; Name=EY674839; organism=Citrus sinensis; type=EST; length=922bp
CGATGCTGAGGATATTCACCCCCTTGTTTGTGACAATGGAACTGGAATGG
TGAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCAGTATTCCCTAGT
ATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAA
GGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTT
TGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAA
AAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGA
GCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAG
AGAAGATGACCCAAATTATGTTTTGAAAACTTTCAATGTGCCAGCCATGT
ACGTTTGCCATCCAGGCTGTTCTATCTCTTTTATGCCAGTGGTCGTACAA
ATGGTATTGTGCTGGATTCTGGGTGAAAGGTGTGGCTCATACTGTAACCA
TTTTATAAAAGGAAATGCCCTTCCCTCATGGCCATTCCTCGTTTGGACTT
TGGCGGGTCATAATCTCAATGGATGCCTTTGAAGAAAATTCTTACCTGAA
AGAAGTTAAAATGTATAACCAACCCCGCCCAAATGGGAAATTTTTCCACT
GTCATGAAAAGAAAAATCTTTCTTTTTTTTTTCCCCTAAAAAATATATAC
CAAAAACCTTAAAAACCGCCACAAAACACTCCCTTCTCTTTTTTAGAAAA
AACATTAAAACTCACCTATAAAAACAAAAAAAAACACCAATTTGGAACAA
AAAAAAATCACTTTGTGCCCAAAAAATATATTATTCAAAACCACCCCTCT
CAACGGAGAAGGGAAACATCCGGCCGGGGATTCTAATATGAACCCAACAC
TCCCACCCTAACCAACCCCTCT
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