EY674832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.912e-68 Identity = 111/157 (70.70%), Postives = 134/157 (85.35%), Query Frame = 1 Query: 13 MPSSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SS++SS VAT RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++ Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAW 155 HSP 2 Score: 41.9726 bits (97), Expect = 3.912e-68 Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANPPG 556 ++RIIGFDN RQVQCISF+A P G Sbjct: 155 WIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 5.104e-68 Identity = 114/157 (72.61%), Postives = 126/157 (80.25%), Query Frame = 1 Query: 13 MPSSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SSMISS V T NRA A VAPFTGLKS + FP T+KTNNDI SIASNGGRVQCM+VWP TG KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+VYRE+H SPGYYDGRYWTMWKLP++GCTDA+QVLKE+ E + YP+ F Sbjct: 1 MASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGF 153 HSP 2 Score: 44.669 bits (104), Expect = 5.104e-68 Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANPP 553 F+RIIGFDN RQVQCISF+A PP Sbjct: 153 FIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.654e-68 Identity = 111/157 (70.70%), Postives = 134/157 (85.35%), Query Frame = 1 Query: 13 MPSSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++ Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAW 155 HSP 2 Score: 41.9726 bits (97), Expect = 6.654e-68 Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANPPG 556 ++RIIGFDN RQVQCISF+A P G Sbjct: 155 WIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.654e-68 Identity = 111/157 (70.70%), Postives = 134/157 (85.35%), Query Frame = 1 Query: 13 MPSSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++ Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAW 155 HSP 2 Score: 41.9726 bits (97), Expect = 6.654e-68 Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANPPG 556 ++RIIGFDN RQVQCISF+A P G Sbjct: 155 WIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 8.672e-68 Identity = 108/159 (67.92%), Postives = 136/159 (85.53%), Query Frame = 1 Query: 13 MPSSMISSTTVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SSM+S+ VAT A+R++ AQASMVAPFTGLKS SAFP T+K++ND++++ SNGG+VQCM+VWPP G KKFETLSYLPPLS+E+LLKE+ YLL +GW+PCLEFE G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F Sbjct: 1 MASSMLSNAAVATTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAF 159 HSP 2 Score: 41.5874 bits (96), Expect = 8.672e-68 Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANP 550 F+RIIGFDN RQVQC+SF+A P Sbjct: 159 FIRIIGFDNVRQVQCVSFIAYKP 181
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBS1_AMAHP (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS1 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.924e-67 Identity = 107/157 (68.15%), Postives = 124/157 (78.98%), Query Frame = 1 Query: 13 MPSSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SSM+S+ +AT + AQASMVAPF GLKS + FP TKK++ND +S+ SNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YLL GWIPC+EFELE +VYRE+H SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F Sbjct: 1 MASSMLSNAAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAF 157 HSP 2 Score: 46.2098 bits (108), Expect = 1.924e-67 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANPPG 556 F+RIIGFDNKRQVQC+SF+A P G Sbjct: 157 FIRIIGFDNKRQVQCVSFIAYKPAG 181
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.509e-67 Identity = 110/155 (70.97%), Postives = 128/155 (82.58%), Query Frame = 1 Query: 19 SSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YLLR GW+PCLEFELEKG+VYREH+ SPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +F Sbjct: 2 ASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAF 155 HSP 2 Score: 42.3578 bits (98), Expect = 2.509e-67 Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANP 550 FVRIIGFDN RQVQCISF+A P Sbjct: 155 FVRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 2.509e-67 Identity = 113/157 (71.97%), Postives = 131/157 (83.44%), Query Frame = 1 Query: 13 MPSSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SSM+ S+ AT RAS AQ+SMVAPFTGLKS+SAFP T+K N D++ + SNGGRVQCMKVWP G+KKFETLSYLP + DEAL+K+I YLLRS WIPCLEF KG+V+RE+H SPGYYDGRYWTMWKLPM+GCTDA QV KEV E +KEYPH+F Sbjct: 1 MVSSMMVSSA-ATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEF-CPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAF 155 HSP 2 Score: 44.669 bits (104), Expect = 2.509e-67 Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANPPG 556 F+RIIGFDN RQVQCISF+A P G Sbjct: 155 FIRIIGFDNNRQVQCISFIAYKPTG 179
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.272e-67 Identity = 110/158 (69.62%), Postives = 133/158 (84.18%), Query Frame = 1 Query: 13 MPSSMISSTTVATANRASLAQA-SMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 M SS+ISS VAT R ++ QA SM+APFTGLKS++ FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP L+DE LLKE+ YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++ Sbjct: 1 MASSVISSAAVAT--RTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAW 156 HSP 2 Score: 41.9726 bits (97), Expect = 3.272e-67 Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANPPG 556 ++RIIGFDN RQVQCISF+A P G Sbjct: 156 WIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY674832 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.272e-67 Identity = 110/155 (70.97%), Postives = 128/155 (82.58%), Query Frame = 1 Query: 19 SSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSF 483 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YLLR GW+PCLEFELEKG+VYREH+ SPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +F Sbjct: 2 ASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAF 155 HSP 2 Score: 42.3578 bits (98), Expect = 3.272e-67 Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 482 FVRIIGFDNKRQVQCISFLAANP 550 FVRIIGFDN RQVQCISF+A P Sbjct: 155 FVRIIGFDNVRQVQCISFIAHTP 177 The following BLAST results are available for this feature:
BLAST of EY674832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674832 ID=EY674832; Name=EY674832; organism=Citrus sinensis; type=EST; length=982bpback to top |