EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.130e-20
Identity = 46/115 (40.00%), Postives = 75/115 (65.22%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F     +I + ATNRPD LD   +RPGR DR++ +  PD   R +I +VH+ GK L++DV+ +++  RT GF+GAD+ NL+NE+ I++ R+  ++I   ++ D +D+  A
Sbjct:  289 TEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLA 403          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.475e-20
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D FS  + +I I ATNR D LD   +RPGR DR++ +  PD   R ++  VH+  K L +DVN + +  RT GFSGAD+ NL+NE+ +++ R  H+KI    I + +D+  A
Sbjct:  296 MDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIA 408          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.517e-20
Identity = 52/115 (45.22%), Postives = 74/115 (64.35%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D FS    VI + ATNR D LD   +RPGR DR++ + LP+   R+ I  VHS  K++ +DV  E +  RT GFSGAD+ NL+NE+ I++VR+G  +I  ++I D +DK  A
Sbjct:  299 TEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIA 413          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.607e-20
Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D F     +I I ATNR D LD   +RPGR DR++ + +PD + R +I  VH + K+   DV+ E +  RT GFSGAD+ NL+NE+ I++ R+G + I  ++I D +D+
Sbjct:  342 TEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDR 453          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.607e-20
Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F     +I I ATNRPD LD   +RPGR DR++ +  PD   R +I +VH+  K+LA +V+ + +  RT GFSGAD+ NL+NE+ I++ R+  S I   +I D +D+  A
Sbjct:  300 TEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVA 414          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.563e-20
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D F     VI + ATNR D LD   +RPGR DR++ + +PD K R  I  VHS  K+    V+ E +  RT GFSGAD+ NL+NE+ I++ R+G + I  ++I D +D+
Sbjct:  348 TEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDR 459          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.249e-19
Identity = 46/96 (47.92%), Postives = 66/96 (68.75%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D     + V+ I ATNRPD +D   +RPGR++R +YI  PD K RV+IF +H  GK LA+DVN EEL  +T G+SGADI  +  E+G++++R+
Sbjct:  582 TELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRE 677          

HSP 2 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            +D    R  VI I ATNRPD +D    RPGR DR + IG+PD + R +I ++H+    LAEDV+ EEL   T GF GAD+  L  E+ + ++R+
Sbjct:  310 MDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRR 403          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.631e-19
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D F     VI + ATNR D LD   +RPGR DR++ + +PD K R  I  VH+  K+   DV+ E +  RT GFSGAD+ NL+NE+ I++ R+  + I  ++I D +D+
Sbjct:  355 TEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDR 466          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.131e-19
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D FS  + +I I ATNR D LD   +RPGR DR++ +  PD   R  +  VH+  K L E VN + +  RT GFSGAD+ NL+NE+ +++ R+   KI  +DI +  D+  A
Sbjct:  291 MDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIA 403          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.131e-19
Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 1
Query:   61 VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            V+ I ATNRP+ LD   +RPGR DRR+ +GLPD + R +I  VH A K+L   V+   +  RT GFSGAD+ NL+NE+ I++ R+G  +I   +I D +D+
Sbjct:  361 VVVIAATNRPEILDAALLRPGRFDRRVSVGLPDVRGREEILLVHGANKRLDPGVSLAVVAMRTPGFSGADLANLMNEAAILAGRRGKDRITVSEIDDSIDR 461          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FTSH4_SYNY31.130e-2040.00Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH_BACPF1.475e-2041.59Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH_CYACA2.517e-2045.22Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH2_ORYSJ5.607e-2041.96Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH1_SYNY35.607e-2042.61Cell division protease ftsH homolog 1 OS=Synechocy... [more]
FTSH8_ARATH9.563e-2042.86Cell division protease ftsH homolog 8, chloroplast... [more]
Y1297_ARCFU1.249e-1947.92Cell division cycle protein 48 homolog AF_1297 OS=... [more]
FTSH2_ARATH1.631e-1941.96Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_BACSU2.131e-1941.59Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH6_ORYSJ2.131e-1946.53Cell division protease ftsH homolog 6, chloroplast... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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