EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.064e-14
Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKI 330
            +D       VI + +TNR D LD   +RPGR+DR ++I LP  ++R +IF+ H  G +L +  +F  + L   T GFSGADI N+ NE+ + + R+GH+ +
Sbjct:  440 MDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSV 540          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.064e-14
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  + ATNR D LD   +RPGR DR + I LPD + R+ I  +H+    + EDVN  E+   T G +GAD+R +  E+G+ ++R     +  +D +  +DK
Sbjct:  284 MDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDK 393          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.064e-14
Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342
            +D F  R  V  + ATNR + LD   +RPGRIDR++   LPD K + +IF +H++   L ++VN EE +      SGADI+ +  E+G++++R+   ++  +D
Sbjct:  319 LDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMED 421          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.064e-14
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR++ I LP+   RV +  +H+A      DV++E +     GF+ AD+RN+  E+G+ ++R     + ++D +  + K
Sbjct:  268 MDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRK 377          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.064e-14
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + V+ I ATNRPD LD   +RPGR DR++ +  PD   R +I  VH    + +  +    +   T GFSGA++ NLVNE+ +++ R+   +++  D+ +  DK
Sbjct:  285 MDGFEANEGVVIIAATNRPDVLDNALLRPGRFDRQITVSNPDIDGREKILQVHLKKVKYSTKIVPRIIARGTPGFSGAELANLVNEATLIAARRNKKEVEMHDLEEAKDK 394          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.695e-14
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQ--LAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F    AVI + ATNR D LD    RPGR DR + +  PD   R  I  VH + K+  L +DV+  ++   T GF+GAD+ NLVNE+ +++ R     +++ D +  +++  A
Sbjct:  475 TEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDFICAVERSIA 591          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.695e-14
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR----TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F+    V+ +  TNRPD LD   +RPGR DR+++IG PD K R  IF VH    +L   +  E+L  +    T GFSGAD+ N+ NE+ +++ R     I Q+     +++
Sbjct:  439 MDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIER 552          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.520e-14
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++   LPD + R  IF +H+    +  D+ FE L       +GA+IR++  E+G+ ++R       ++D ++ ++K
Sbjct:  306 LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNK 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.520e-14
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++   LPD + R QIF +H+       D+ FE L       +GADIR++  E+G+ ++      + ++D +D ++K
Sbjct:  336 LDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNK 445          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.520e-14
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVH----SAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F+    V+ +  TNRPD LD   +RPGR DR+++IG PD K R  IF VH         L +D    +L   T GFSGAD+ N+ NE+ +++ R     I Q+     +++
Sbjct:  438 MDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIER 551          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
SPG7_MOUSE2.064e-1439.60Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1[more]
PSMR_METMJ2.064e-1437.27Proteasome-activating nucleotidase OS=Methanoculle... [more]
PRS4_CAEEL2.064e-1436.89Probable 26S protease regulatory subunit 4 OS=Caen... [more]
PRS10_DICDI2.064e-1435.4526S protease regulatory subunit S10B OS=Dictyostel... [more]
FTSH_RICBR2.064e-1435.45Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH7_ORYSJ2.695e-1436.75Cell division protease ftsH homolog 7, chloroplast... [more]
AFG32_BOVIN2.695e-1436.84AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 S... [more]
PRS7_XENLA3.520e-1433.6426S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7B_ARATH3.520e-1435.4526S protease regulatory subunit 7 homolog B OS=Ara... [more]
AFG32_HUMAN3.520e-1436.84AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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