EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.520e-14
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVH----SAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F+    V+ +  TNRPD LD    RPGR DR++YIG PD K R  IF VH         L++D    +L   T GF+GADI N+ NE+ +++ R     +Q++     +++
Sbjct:  430 MDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIER 543          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   31 GIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            G+D F  R  V  I ATNR D LD   +RPGR DR + I LPD + R+ I  VH+    + E VN  E+   T G +GAD+R +  E+G+ ++R     I ++D +  ++K
Sbjct:  308 GMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEK 418          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 40/110 (36.36%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNR D +D   +RPGR DR + + LP  + R++I  +H+   ++A DV+ E +   T GFSGAD++ +V E+G  ++R+G   I   D++  ++K
Sbjct:  270 LDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEK 379          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++   LPD + R  IF +H+    +  D+ FE L       +GA+IR++  E+G+ ++R       ++D ++ ++K
Sbjct:  306 LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++   LPD + R  IF +H+    +  D+ FE L       +GA+IR++  E+G+ ++R       ++D ++ ++K
Sbjct:  306 LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++   LPD + R  IF +H+    +  D+ FE L       +GA+IR++  E+G+ ++R       ++D ++ ++K
Sbjct:  306 LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++   LPD + R  IF +H+    +  D+ FE L       +GA+IR++  E+G+ ++R       ++D ++ ++K
Sbjct:  306 LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++   LPD + R  IF +H+    +  D+ FE L       +GA+IR++  E+G+ ++R       ++D ++ ++K
Sbjct:  306 LDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDV 354
            T +D    R  V+ I ATNRP+ +D    R GR DR + IG+PDA  R+++  +H+   +LA+DV+ E L   T G+ GADI +L +E+ +  +R      ++ D++D+
Sbjct:  340 TLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIR------EKMDLIDL 442          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +LA+DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKG-HSKIQQQ 339
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K RV I   +     +A+DV+ E L   T GFSGAD+  +   +  +++R+   S+I+++
Sbjct:  606 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
AFG31_MOUSE3.520e-1436.84AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2... [more]
PSMR_METB64.597e-1438.74Proteasome-activating nucleotidase OS=Methanoregul... [more]
PSMR_AERPE4.597e-1436.36Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
PRS7_RAT4.597e-1433.6426S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_MOUSE4.597e-1433.6426S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_MACFA4.597e-1433.6426S protease regulatory subunit 7 OS=Macaca fascic... [more]
PRS7_HUMAN4.597e-1433.6426S protease regulatory subunit 7 OS=Homo sapiens ... [more]
PRS7_BOVIN4.597e-1433.6426S protease regulatory subunit 7 OS=Bos taurus GN... [more]
CDC48_YEAST4.597e-1436.70Cell division control protein 48 OS=Saccharomyces ... [more]
TERA_RAT7.842e-1436.61Transitional endoplasmic reticulum ATPase OS=Rattu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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