EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +LA+DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKG-HSKIQQQ 339
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K RV I   +     +A+DV+ E L   T GFSGAD+  +   +  +++R+   S+I+++
Sbjct:  606 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +LA+DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKG-HSKIQQQ 339
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K RV I   +     +A+DV+ E L   T GFSGAD+  +   +  +++R+   S+I+++
Sbjct:  606 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +LA+DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKG-HSKIQQQ 339
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K RV I   +     +A+DV+ E L   T GFSGAD+  +   +  +++R+   S+I+++
Sbjct:  606 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +LA+DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K R+ I   +     +++DV+ + L   T GFSGAD+  +   +  +++R+
Sbjct:  606 TEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +LA+DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKG-HSKIQQQ 339
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K RV I   +     +A+DV+ E L   T GFSGAD+  +   +  +++R+   S+I+++
Sbjct:  606 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQ 366
            T +D    R  V+ I ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +L EDV+ E++     GF GAD+ +L +E+ I  +R+    I  +D  D +D +
Sbjct:  335 TLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED--DTIDAE 445          

HSP 2 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342
            T +D  + ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD   R+QIF        L+ D++   L   TVGFSGAD+  +   +  +++R+   +  +Q+
Sbjct:  611 TEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQE 715          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVD 351
            +D FS    V  + ATNR D LD   +R GR+DR++   LP    R QI  +HS      +D+N++EL   T  F+GA ++ +  E+G++++R G S ++ +D V+
Sbjct:  312 LDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVE 417          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 40/106 (37.74%), Postives = 66/106 (62.26%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVD 351
            +D FS    V  I ATNR D LD   +R GR+DR+L   LP+ + RV I  +HS    + +D+N+EEL   T  ++GA ++++  E+G++++R+G +KI  +  +D
Sbjct:  316 LDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMD 421          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 39/110 (35.45%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F        I ATNRPD LD   +RPGR+DR++ I LP+   R++I  +H        ++++E LV  T G +GAD+RN+V E+G +++++    + Q D++    K
Sbjct:  263 MDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARK 372          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V+ +  TNRPD LD   +RPGR DR++ I  PD K R QIF ++    +L  + +F  + L   T GF+GADI N+ NE+ +++ R   ++I  Q     +D+
Sbjct:  466 MDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDR 577          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
TERA_PIG7.842e-1436.61Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
TERA_MOUSE7.842e-1436.61Transitional endoplasmic reticulum ATPase OS=Mus m... [more]
TERA_HUMAN7.842e-1436.61Transitional endoplasmic reticulum ATPase OS=Homo ... [more]
TERA_DANRE7.842e-1436.61Transitional endoplasmic reticulum ATPase OS=Danio... [more]
TERA_BOVIN7.842e-1436.61Transitional endoplasmic reticulum ATPase OS=Bos t... [more]
TERA2_CAEEL7.842e-1437.17Transitional endoplasmic reticulum ATPase homolog ... [more]
PRS6A_YEAST7.842e-1435.8526S protease regulatory subunit 6A OS=Saccharomyce... [more]
PRS6A_SCHPO7.842e-1437.7426S protease regulatory subunit 6A OS=Schizosaccha... [more]
PRS10_SCHPO7.842e-1435.45Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]
FTSH8_ORYSJ7.842e-1436.61Cell division protease ftsH homolog 8, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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