EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342
            +D FS    +  I ATNR D LD   +R GR+DR++    P  + R +I  +HS    +  DVNFEEL   T  F+GA ++ +  E+G++++R+  +++  +D
Sbjct:  301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHED 403          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 327
            T +D  + ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD   R QIF        L++D++   L   T GFSGAD+  +   +   ++R+   K
Sbjct:  610 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEK 709          

HSP 2 Score: 70.0922 bits (170), Expect = 2.135e-11
Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLD 360
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PD   R+++  +H+   +LAE+V+ E +   T G+ GAD+  L  E+ +  +R      ++ D++D+ D
Sbjct:  334 TLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIR------EKMDVLDLED 438          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLD 360
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PD   R+++  +H+   +LAEDV+ E +   T G+ GAD+  L  E+ +  +R      ++ D++D+ D
Sbjct:  333 TLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR------EKMDVIDLED 437          

HSP 2 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 327
            T +D  + ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD   R+ IF        +A+DV+   L   T GFSGADI  +   +   ++R+   K
Sbjct:  609 TEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEK 708          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLD 360
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PD   R+++  +H+   +LAEDV+ E +   T G+ GAD+  L  E+ +  +R      ++ D++D+ D
Sbjct:  333 TLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR------EKMDVIDLED 437          

HSP 2 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 327
            T +D  + ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD   R+ IF        +A+DV+   L   T GFSGADI  +   +   ++R+   K
Sbjct:  610 TEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEK 709          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: AFG2_YEAST (ATPase family gene 2 protein OS=Saccharomyces cerevisiae GN=AFG2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAED-VNFEELVFRTVGFSGADIRNLVNESGIMSV 309
            ID     + V+ + ATNRPDE+D   +RPGR+DR +Y+G PD   R++I    +      E  V+  EL  RT G+SGA++  L  E+G+ ++
Sbjct:  644 IDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12
Identity = 38/127 (29.92%), Postives = 68/127 (53.54%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFALRVWVYLLTEEE 408
            T +D       +I + ATNRP+ +D    R GR DR + IG+PDA  R+++  +H+   +L +DV+ E++   + G  GAD+ +L +E+ +  +R      ++ D++D+ D +    V   L    E
Sbjct:  327 TLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIR------EKMDLIDLEDDKIDAEVLASLAVTME 447          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342
            +D FS    +  I ATNR D LD   +R GR+DR++    P  + R +I  +HS    +  DVNFEEL   T  F+GA ++ +  E+G++++R+  +++  +D
Sbjct:  301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.635e-11
Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D     + V  + ATNRPD +D   +RPGRIDR +Y+ LPDA  R +I ++      ++ +V+ +ELV +T  +SGA+I  +  E+ ++++ +
Sbjct:  755 TEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEE 850          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.135e-11
Identity = 31/110 (28.18%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  ++ +I + ATN+ + LD   +RPGR D ++++  P  + R+ + +++    +   +++ E+L   TVG++GADI+NLVN++ I +  +    ++   + D  D+
Sbjct:  294 MDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDR 403          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.789e-11
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            +D F     V  I ATNR D LD   +RPGR+DR++   LPD +Q+  IF   ++   L+E+V+ E+ V R    SGADI ++    G+++VR+
Sbjct:  296 MDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRE 389          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
PRS6A_SOLLC7.339e-1234.9526S protease regulatory subunit 6A homolog OS=Sola... [more]
CDC48_CAPAN7.339e-1237.00Cell division cycle protein 48 homolog OS=Capsicum... [more]
CD48E_ARATH7.339e-1235.14Cell division control protein 48 homolog E OS=Arab... [more]
CD48A_ARATH7.339e-1235.14Cell division control protein 48 homolog A OS=Arab... [more]
AFG2_YEAST7.339e-1238.71ATPase family gene 2 protein OS=Saccharomyces cere... [more]
TERA_DROME9.586e-1229.92Transitional endoplasmic reticulum ATPase TER94 OS... [more]
PS6AB_ARATH1.252e-1134.9526S protease regulatory subunit 6A homolog B OS=Ar... [more]
SPAT5_MOUSE1.635e-1135.42Spermatogenesis-associated protein 5 OS=Mus muscul... [more]
YME1_SCHMA2.135e-1128.18Protein YME1 homolog OS=Schistosoma mansoni PE=2 S... [more]
PRS6B_MOUSE2.789e-1139.3626S protease regulatory subunit 6B OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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