EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.169e-17
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   34 IDRFSLRQA-VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D F    A VI + ATNRP+ LD   +RPGR DR++ +  PD   RV+I  VH  G +LA DVN +E+   T G +GAD+ N++NE+ +++ R    +++QQ + + +++  A
Sbjct:  301 MDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIA 414          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.527e-17
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 327
            T +D     + V+ I ATNRPD +D   +RPGR+DR + + +PD K R+ IF +H+    LAEDVN EEL  +T G++GADI  L  E+ +++VR+   K
Sbjct:  579 TELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGK 678          

HSP 2 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D    R  V+ I ATNRP+ LD    RPGR DR + IG+PD + R +I  +H+    LAEDV+ + L   T GF GAD+  L  E+ + ++R+
Sbjct:  305 TLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRR 400          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.527e-17
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F     VI I ATNR D LD   +RPGR DR++ + +PD K R+ I +VH+  K++   V+ E +  RT GFSGAD+ NL+NE+ I++ R+  + +   +I   +D+  A
Sbjct:  301 TEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTARRRKNAMTMSEIDTSIDRVVA 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.994e-17
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D FS    VI I ATNRPD LD    RPGR DR++ +GLPD K R QI  VH     +A+DV+   L   T G+SGAD+ NLVNE+ + + R     +   +     DK
Sbjct:   27 MDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDK 136          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.994e-17
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D FS    VI I ATNRPD LD    RPGR DR++ +GLPD K R QI  VH     +A+DV+   L   T G+SGAD+ NLVNE+ + + R     +   +     DK
Sbjct:  281 MDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDK 390          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.604e-17
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNR + LD   +RPGRIDR++   LPD K R +IF +H++   LAEDVN EE V     FSGADI+ +  E+G++++R+   K+   D     +K
Sbjct:  319 LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEK 428          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.604e-17
Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  VI I ATNRPD LD   +RPGR DR++ +  PD   R  +  VHS GK +A+D + + L  RTVG +GAD+ N+VNE+ +++ R+    I    + + +D+
Sbjct:  293 MDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDR 402          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.401e-17
Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNR + LD   +RPGRIDR++   LPD K + +IF++H+A   L+EDVN EE V      SGADI+ +  ESG++++R+   ++   D     +K
Sbjct:  315 LDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEK 424          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.401e-17
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  VI I ATNRPD LD   +RPGR DR++ +  PD   R  +  VHS GK +A D + + L  RTVG +GAD+ N++NE+ +++ R+  + I    + + +D+
Sbjct:  293 MDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDR 402          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.401e-17
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  VI I ATNRPD LD   +RPGR DR++ +  PD   R  +  VHS GK +A D + + L  RTVG +GAD+ N++NE+ +++ R+  + I    + + +D+
Sbjct:  293 MDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDR 402          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FTSH_HELPJ1.169e-1738.60Cell division protease ftsH homolog OS=Helicobacte... [more]
Y1156_METJA1.527e-1744.00Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
FSTH_PORYE1.527e-1740.00Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH2_HAEIN1.994e-1743.64Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH1_HAEIN1.994e-1743.64Cell division protease ftsH homolog 1 OS=Haemophil... [more]
PRS4B_ARATH2.604e-1742.7326S proteasome regulatory subunit 4 homolog B OS=A... [more]
FTSH_MYCLE2.604e-1740.91Cell division protease ftsH homolog OS=Mycobacteri... [more]
PRS4_DICDI3.401e-1740.9126S protease regulatory subunit 4 homolog OS=Dicty... [more]
FTSH_MYCTU3.401e-1740.00Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCTA3.401e-1740.00Cell division protease ftsH homolog OS=Mycobacteri... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
back to top