EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.401e-17
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  VI I ATNRPD LD   +RPGR DR++ +  PD   R  +  VHS GK +A D + + L  RTVG +GAD+ N++NE+ +++ R+  + I    + + +D+
Sbjct:  293 MDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDR 402          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.401e-17
Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 1
Query:   58 AVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +VI I ATNR D LD   +RPGR DR++ +G PD K R  +  VH+  K LA DV+   +  +T G+ GAD+ N++NE+ +++ R+   +I   DI + +D+  A
Sbjct:  332 SVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMA 436          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.442e-17
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNR + LD   +RPGRIDR++   LPD K R +IF +H++   LA+DVN EE V     FSGADI+ +  E+G++++R+   K+   D     +K
Sbjct:  324 LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEK 433          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.442e-17
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNR + LD   +RPGRIDR++   LPD K R +IF +H++   L+EDVN EE V     FSGADI+ +  E+G++++R+   K+   D     +K
Sbjct:  319 LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEK 428          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.802e-17
Identity = 45/127 (35.43%), Postives = 78/127 (61.42%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK-QFALRVWVYLLTEEEQ 411
            +D F     +I + ATNRPD LD   +RPGR DR++ +  PD K R  I  +H+   +LA +V+ + +   T G+SGAD+ N+VNE+ +++VR G +++ + D+ + ++K    L+    ++ EEE+
Sbjct:  270 MDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQKKSRVIREEER 396          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.578e-17
Identity = 43/114 (37.72%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   34 IDRFSLRQA-VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D F    A VI + ATNRP+ LD   +RPGR DR++ +  PD K RV+I  VH    +LA DV+ +E+   T G +GAD+ N++NE+ +++ R    +++QQ + + +++  A
Sbjct:  307 MDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIA 420          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.897e-17
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++  GLPD + R QIF +H+       D+ FE L       +GADIR++  E+G+ ++R     + ++D +D ++K
Sbjct:  298 LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNK 407          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.897e-17
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++  GLPD + R QIF +H+       D+ FE L       +GADIR++  E+G+ ++R     + ++D +D ++K
Sbjct:  299 LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNK 408          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 9.897e-17
Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342
            +D F  R  V  I ATNR + LD   +RPGRIDR++   LPD K + +IF +H++   LAEDVN  EL+      SGADI+ +  E+G+M++R+   K+  +D
Sbjct:  315 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 417          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNR D LD   +RPGR DR + + LPD K R +IF+++    ++ +++N E L   T GFSGADI+N+  E+  M++R G +K+   D+V+ ++K
Sbjct:  265 LDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINK 374          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FTSH_MYCBO3.401e-1740.00Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_LACLA3.401e-1740.00Cell division protease ftsH homolog OS=Lactococcus... [more]
PRS4_ORYSJ4.442e-1741.8226S protease regulatory subunit 4 homolog OS=Oryza... [more]
PRS4A_ARATH4.442e-1741.8226S proteasome regulatory subunit 4 homolog A OS=A... [more]
FTSH_TREPA5.802e-1735.43Cell division protease ftsH homolog OS=Treponema p... [more]
FTSH_HELFE7.578e-1737.72Cell division protease ftsH homolog OS=Helicobacte... [more]
PRS7_PRUPE9.897e-1737.2726S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH9.897e-1737.2726S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS4_DROME9.897e-1742.7226S protease regulatory subunit 4 OS=Drosophila me... [more]
PSMR_SULSO1.293e-1640.00Proteasome-activating nucleotidase OS=Sulfolobus s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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