EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNR D LD   +RPGR DR + + LP  + R+QIF +H+   +LAEDV+F+EL   T G SGADI+ +  E+G+ ++R+  +K+   D    ++K
Sbjct:  272 LDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEK 381
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++  GLPD + R  IF +H+     A D+ FE L       +GADIR++  E+G+ ++R     + ++D ++ +DK
Sbjct:  301 LDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDK 410
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK
Sbjct:  282 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDK 391
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK
Sbjct:  282 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDK 391
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK
Sbjct:  282 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDK 391
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK
Sbjct:  282 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDK 391
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK
Sbjct:  282 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDK 391
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.688e-16
Identity = 39/110 (35.45%), Postives = 69/110 (62.73%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R+ +  I ATNRPD LD   +RPGR DR +++ +P  + R +I  +H     LAED++F++L   T G SGAD++ +  E+G+ +VR+    ++ ++ ++ ++K
Sbjct:  290 MDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEK 399
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.688e-16
Identity = 40/110 (36.36%), Postives = 69/110 (62.73%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R+ +  I ATNRPD LD   +RPGR DR +++ +P  + R +I  +H     LA D++F++L   T G SGAD++ +  E+G+ +VRK  + ++ +D ++ ++K
Sbjct:  290 MDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEK 399
[Close]
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.688e-16
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1 
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++  GLPD + R QIF +H+       D+ FE L       +GADIR++  E+G+ ++R     + ++D +D ++K
Sbjct:  299 LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNK 408
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
PSMR_ARCFU1.293e-1641.82Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PRS7_DICDI1.293e-1637.2726S protease regulatory subunit 7 OS=Dictyostelium... [more]
FTSH_SHIFL1.293e-1640.91Cell division protease ftsH OS=Shigella flexneri G... [more]
FTSH_SALTY1.293e-1640.91Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI1.293e-1640.91Cell division protease ftsH OS=Salmonella typhi GN... [more]
FTSH_ECOLI1.293e-1640.91Cell division protease ftsH OS=Escherichia coli (s... [more]
FTSH_ECO571.293e-1640.91Cell division protease ftsH OS=Escherichia coli O1... [more]
PSMR_METMA1.688e-1635.45Proteasome-activating nucleotidase OS=Methanosarci... [more]
PSMR_METAC1.688e-1636.36Proteasome-activating nucleotidase OS=Methanosarci... [more]
PRS7_SPIOL1.688e-1637.2726S protease regulatory subunit 7 OS=Spinacia oler... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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