EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.688e-16
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  +  + ATNRPD LD   +RPGR+DR++  GLPD + R QIF +H+       D+ FE L       +GADIR++  E+G+ ++R     + ++D +D ++K
Sbjct:  299 LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNK 408          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.205e-16
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQF 369
            +D F  R  +  I ATN+ + LD   +RPGRIDR++  G+PDA  + +IFD+H++   L E VN E L+      SGADI+ +  E+G++++R+    +  +D +   +K F
Sbjct:  300 LDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKVF 411          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.879e-16
Identity = 40/110 (36.36%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR+++I LP+ + R+ I  +H+       ++++E +V  + GF+GAD+RN+  E+G+ ++R  H  + Q+D +  + K
Sbjct:  264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRK 373          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.879e-16
Identity = 40/110 (36.36%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR+++I LP+ + R+ I  +H+       ++++E +V  + GF+GAD+RN+  E+G+ ++R  H  + Q+D +  + K
Sbjct:  264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRK 373          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.879e-16
Identity = 40/110 (36.36%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR+++I LP+ + R+ I  +H+       ++++E +V  + GF+GAD+RN+  E+G+ ++R  H  + Q+D +  + K
Sbjct:  264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRK 373          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.879e-16
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATNRPD LD   +RPGR DR++++ LPD + R +I  VH     L  +V+   +   T GFSGAD+ NLVNE+ + + R     +   D     DK
Sbjct:  282 MDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDK 391          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.761e-16
Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F+    V  I ATNR D LD   +RPGR DR + + LPD + R +IF+++    ++ +++N E L   + GFSGADI+N+  E+  M++R G +K+  +D+VD + K
Sbjct:  265 LDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITK 374          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.761e-16
Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F+    V  I ATNR D LD   +RPGR DR + + LPD + R +IF+++    ++ +++N E L   + GFSGADI+N+  E+  M++R G +K+  +D+VD + K
Sbjct:  265 LDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITK 374          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.761e-16
Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F+    V  I ATNR D LD   +RPGR DR + + LPD + R +IF+++    ++ +++N E L   + GFSGADI+N+  E+  M++R G +K+  +D+VD + K
Sbjct:  265 LDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITK 374          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.761e-16
Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F+    V  I ATNR D LD   +RPGR DR + + LPD + R +IF+++    ++ +++N E L   + GFSGADI+N+  E+  M++R G +K+  +D+VD + K
Sbjct:  265 LDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITK 374          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
PRS7_ORYSJ1.688e-1637.2726S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS4_ENCCU2.205e-1636.6126S protease regulatory subunit 4 homolog OS=Encep... [more]
PRS10_SPETR2.879e-1636.3626S protease regulatory subunit S10B OS=Spermophil... [more]
PRS10_MOUSE2.879e-1636.3626S protease regulatory subunit S10B OS=Mus muscul... [more]
PRS10_HUMAN2.879e-1636.3626S protease regulatory subunit S10B OS=Homo sapie... [more]
FTSH_BUCBP2.879e-1639.09Cell division protease ftsH OS=Buchnera aphidicola... [more]
PSMR_SULIY3.761e-1639.09Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIM3.761e-1639.09Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIL3.761e-1639.09Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIK3.761e-1639.09Proteasome-activating nucleotidase OS=Sulfolobus i... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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