EY674769
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.761e-16 Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363 +D F+ V I ATNR D LD +RPGR DR + + LPD + R +IF+++ ++ +++N E L + GFSGADI+N+ E+ M++R G +K+ +D+VD + K Sbjct: 265 LDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITK 374
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.761e-16 Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342 +D F R V I ATNR + LD +RPGRIDR++ LPD K + +IF +H++ LA+DV +EL+ SGADI+ + E+G+M++R+ K+ +D Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.912e-16 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363 +D F R V + ATNRPD LD +RPGR DR + + LP+ R +I +H++G LAE+V+ E L T G SGAD++ + E+G+ ++R ++ D +D +DK Sbjct: 282 LDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDK 391
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.415e-16 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363 +D F + I ATNR D LD +RPGR DR + I LPD + R +IF +H+ LAEDV+ ++L T G SGADI+ + E+G+M++R+ + D + +D+ Sbjct: 310 MDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDR 419
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.415e-16 Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVR 312 +D F + VI I ATNRPD LD +RPGR DR++ + LPD + R QI VH L+EDV+ + T GFSGAD+ NLVNE+ + + R Sbjct: 282 MDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAAR 374
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.378e-16 Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342 +D F R V I ATNR + LD +RPGRIDR++ LPD K + +IF +H++ LA+DV ++L+ SGADI+ + E+G+M++R+ K+ +D Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.378e-16 Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342 +D F R V I ATNR + LD +RPGRIDR++ LPD K + +IF +H++ LA+DV ++L+ SGADI+ + E+G+M++R+ K+ +D Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.378e-16 Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342 +D F R V I ATNR + LD +RPGRIDR++ LPD K + +IF +H++ LA+DV ++L+ SGADI+ + E+G+M++R+ K+ +D Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.429e-15 Identity = 42/110 (38.18%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363 +D F+ V I ATNR D LD +RPGR DR + + LPD + R +IF+++ ++ +++N E L + GFSGADI+N+ E+ M++R G +K+ +D+V+ + K Sbjct: 265 LDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITK 374
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.429e-15 Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQL--AEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372 T +D F AVI + ATNR D LD RPGR DR + + PD R I VH + K+L +DVN + T GF+GAD+ NLVNE+ +++ RK + +++ D + +++ A Sbjct: 454 TEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIA 570 The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bpback to top |