EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.866e-15
Identity = 39/110 (35.45%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR+++I LP+ + R+ I  +H+       ++++E +V  + GF+GAD+ N+  E+G+ ++R  H  + Q+D +  + K
Sbjct:  264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRK 373          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.866e-15
Identity = 41/116 (35.34%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   28 TGIDRFSLRQA-VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D FS   A VI + ATNRP+ LD   +RPGR DR++ +  PD   R++I ++++   +L ++V  + +  RT GF+GAD+ NLVNE+ +++ R     + + D  + +++  A
Sbjct:  303 TEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVA 418          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.438e-15
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATNRPD LD   +RPGR DR++ + LPD + R QI  VH     L++DV+   +   T GFSGAD+ NLVNE+ + + R     +   +     DK
Sbjct:  282 MDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDK 391          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.184e-15
Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR++ I LP+ + R+ I  +H+AG     ++++E +V    GF+GAD+RN+  E+G+ ++R     +  +D +  + K
Sbjct:  270 LDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRK 379          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 3.184e-15
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D F        I ATNRPD LD   +RPGR+DR++ I LP+   R++IF +H+A  +   + +FE  V  + GF+GADIRN   E+G  ++R     I   D++  + K
Sbjct:  310 TQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRK 421          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.158e-15
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + V+ I ATNRPD LD   +RPGR DR++ +  PD   R QI  VH    +    V    +   T GFSGA++ NLVNE+ +++ R G  ++   D+ +  DK
Sbjct:  285 MDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDK 394          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.158e-15
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + V+ I ATNRPD LD   +RPGR DR++ +  PD   R QI  VH    +    V    +   T GFSGA++ NLVNE+ +++ R G  ++   D+ +  DK
Sbjct:  285 MDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDK 394          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.158e-15
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + V+ I ATNRPD LD   +RPGR DR++ +  PD   R QI  VH    +    V    +   T GFSGA++ NLVNE+ +++ R G  ++   D+ +  DK
Sbjct:  285 MDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDK 394          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.158e-15
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + V+ I ATNRPD LD   +RPGR DR++ +  PD   R QI  VH    +    V    +   T GFSGA++ NLVNE+ +++ R G  ++   D+ +  DK
Sbjct:  285 MDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDK 394          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.158e-15
Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNL----VNES-----GIMSVRKGHSKIQQQ 339
            T ID  + ++ +  I ATNRPD LD    RPGR+D+ +YI LPD K R  IF        L EDV+  ++  RT GFSGADI NL    VNE+      ++++RK   + Q++
Sbjct: 1061 TEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRK 1173          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
PRS10_BOVIN1.866e-1535.4526S protease regulatory subunit S10B OS=Bos taurus... [more]
FTSH3_SYNY31.866e-1535.34Cell division protease ftsH homolog 3 OS=Synechocy... [more]
FTSH_BUCAI2.438e-1540.00Cell division protease ftsH OS=Buchnera aphidicola... [more]
PS10A_ARATH3.184e-1536.3626S protease regulatory subunit 10B homolog A OS=A... [more]
PRS10_YEAST3.184e-1538.3926S protease subunit RPT4 OS=Saccharomyces cerevis... [more]
FTSH_RICTY4.158e-1538.18Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICPR4.158e-1538.18Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICFE4.158e-1538.18Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICCN4.158e-1538.18Cell division protease ftsH homolog OS=Rickettsia ... [more]
CDAT_PLAF74.158e-1541.59Putative cell division cycle ATPase OS=Plasmodium ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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