EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D FS R  V  I ATNR D LD   +RPGR DR + I  PD + RV I ++H AG  + + V+  ++  RT G +GAD+R++  E+G+ ++R  H  +  +D    ++K
Sbjct:  284 MDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNR D LD   +RPGR DR + I LPD + R  I  VH+    L+EDV+  E+   T G +GA++  +  E+G+ ++RK H ++ Q+D +  L+K
Sbjct:  284 MDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVDQEDFLTALNK 393          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 39/110 (35.45%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR++ I LP+ + R++I  +H++G     ++++E +V    GF+GAD+RN+  E+G+ ++R     +  +D +  + K
Sbjct:  270 LDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRK 379          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQ--LAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F    AVI + ATNR D LD    RPGR DR + +  PD   R  I  VH + K+  L +DVN   +   T GF+GAD+ NLVNE+ +++ RK    + + D +  +++  A
Sbjct:  458 TEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIA 574          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.092e-15
Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR+DR++ IGLP+ + R++I  +HS       +++FE +V  + GFS AD+RN+  E+G+ ++R     +  +D +  + K
Sbjct:  281 LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRK 390          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.263e-15
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNRPD LD   +RPGR DR + +  PD K R++I  +H+    LAEDVN EE+   T G  GA+++ +  E+G+ ++R+    +   D    ++K
Sbjct:  301 MDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEK 410          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.263e-15
Identity = 39/110 (35.45%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I + ATN PD LD    RPGR DR + +  PD + R +I +++  GK ++EDV+ + +   T GF+GAD+ NLVN + I +  +G  K+  + +    D+
Sbjct:  488 MDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDR 597          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.210e-14
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKG--HSKIQQQDIVDVL 357
            T +D   +   V+ I ATNRPD +D   +R GR D+ +YI  PD + R+ I  VH+    LA DV+  ++  RT G+ GAD+ NL  E+G+ + R+    + + Q++ +D L
Sbjct:  594 TSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDAL 705          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.210e-14
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 1
Query:   61 VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQ 339
            V+ I ATNRPD LD   +RPGR DR +Y+  PD   R +I  VH+    LAEDV+ E++  +  G++GAD+  LV E+ I ++R  +S   +Q
Sbjct:  625 VVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQ 717          

HSP 2 Score: 73.9442 bits (180), Expect = 1.479e-12
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D    R  VI I ATNRPD +D    RPGR DR + I  PD K R  I  VH+    + +DV+ ++L   T G++GAD+  L  E+ I ++R+
Sbjct:  338 TLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRR 433          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVD 351
            +D FS  + V  I ATNR D LD   +R GR+DR++   LP+   R +I  +H+    + +DVNF+EL   T GF+GA  + +  E+G+ ++RK  ++I Q D +D
Sbjct:  279 LDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMD 384          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
PSMR_METPE5.430e-1538.18Proteasome-activating nucleotidase OS=Methanosphae... [more]
PSMR_METHJ5.430e-1540.00Proteasome-activating nucleotidase OS=Methanospiri... [more]
PS10B_ARATH5.430e-1535.4526S protease regulatory subunit S10B homolog B OS=... [more]
FTSH9_ARATH5.430e-1538.46Cell division protease ftsH homolog 9, chloroplast... [more]
PRS10_CAEEL7.092e-1537.27Probable 26S protease regulatory subunit S10B OS=C... [more]
PSMR_METJA9.263e-1538.18Proteasome-activating nucleotidase OS=Methanocaldo... [more]
FTSHB_ARATH9.263e-1535.45Cell division protease ftsH homolog 11, chloroplas... [more]
VAT_THEAC1.210e-1436.61VCP-like ATPase OS=Thermoplasma acidophilum GN=vat... [more]
SAV_SULAC1.210e-1443.01Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
PRS6A_ENCCU1.580e-1438.6826S protease regulatory subunit 6A OS=Encephalitoz... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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