EY680350

Overview
NameEY680350
Unique NameEY680350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CL1_DICDI (Probable 4-coumarate--CoA ligase 1 OS=Dictyostelium discoideum GN=4cl1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.184e-28
Identity = 69/183 (37.70%), Postives = 104/183 (56.83%), Query Frame = 1
Query:   79 LHFTVLSEADEDQIPEVAIKPD-DPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELENALRSRVP-QAILGQGYGMTKAGP 621
            + F  L   +    P V I P  D   +PFSSGTTGL KGV L+H +++++  Q    E  + Y  N D V+ +LP FHIY L   L+  ++ G  V+++ KFE    LELIQ+++V+             K+P+V  +DLSS+R + SGAAPL  E+E+ ++ R   + ++ QGYG T+  P
Sbjct:  175 MSFNQLINNNGKDYPIVRIDPKKDTAIIPFSSGTTGLFKGVCLSHHNIVSNTYQTQTIET-STYKKN-DTVMGILPFFHIYGLMLFLMLMVKQGHRVVVLPKFEPVRFLELIQKYKVAISFIVPPVAIMFAKSPIVDKFDLSSLRTLFSGAAPLSSEVEDLIKERFKGRLVIKQGYGATELSP 355          

HSP 2 Score: 32.7278 bits (73), Expect = 5.184e-28
Identity = 17/45 (37.78%), Postives = 26/45 (57.78%), Query Frame = 2
Query:  665 KSRSWGPVLEMLNSKFWTPETGASLPQIHPGKICPRGPQI*KGFF 799
            KS S G +L    +K  +PETG +L     G+IC +GP +  G++
Sbjct:  366 KSGSAGILLPNQLAKIISPETGENLGMGEKGEICIKGPNVMLGYY 410          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CL1_SOYBN (4-coumarate--CoA ligase 1 (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.523e-26
Identity = 64/123 (52.03%), Postives = 84/123 (68.29%), Query Frame = 1
Query:  352 AGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELENALRSRVPQAILGQGYGMTKAGPVLSMCLGFAKHPF-LQVQIMGPRVRNAELKVLD 717
            A A +LLM KF+I +LL LI +H+V+             K+P +  YDLSS+RV+ SG APLGKELE+ LR++ P A LGQGYGMT+AGPVL+M L FAK P  ++    G  VRNAE+K++D
Sbjct:    1 AKATILLMPKFDINSLLALIHKHKVTIAPVVPPIVLAISKSPDLHKYDLSSIRVLKSGGAPLGKELEDTLRAKFPNAKLGQGYGMTEAGPVLTMSLAFAKEPIDVKPGACGTVVRNAEMKIVD 123          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.970e-26
Identity = 71/204 (34.80%), Postives = 108/204 (52.94%), Query Frame = 1
Query:   52 TIDAPP---ENCLHFTVLSEADE--DQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTH-----KSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELENALRSRVPQAILGQGYGMTKAGPVLSM 633
            T++ PP      L F  + E  E   + P V IK  D  AL +SSGTTG  KGV LTH      SL+ ++ Q + GE   ++L       C LP+FH++ L  +    L+ G  ++ M +FE+  +L+ I++ RV+             K  +V  +DLSS++ + SGAAPLGK+L       +P  +L QGYGMT+   ++S+
Sbjct:  155 TVEIPPGSNSKILSFDNVMELSEPVSEYPFVEIKQSDTAALLYSSGTTGTSKGVELTHGNFIAASLMVTMDQDLMGEYHGVFL-------CFLPMFHVFGLAVITYSQLQRGNALVSMARFELELVLKNIEKFRVTHLWVVPPVFLALSKQSIVKKFDLSSLKYIGSGAAPLGKDLMEECGRNIPNVLLMQGYGMTETCGIVSV 351          

HSP 2 Score: 26.5646 bits (57), Expect = 5.970e-26
Identity = 15/43 (34.88%), Postives = 23/43 (53.49%), Query Frame = 2
Query:  668 SRSWGPVLEMLNSKFWTPETGASLPQIHPGKICPRGPQI*KGF 796
            S S G +   + ++  + ETG S P    G+I  RGP + KG+
Sbjct:  361 SGSAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGY 403          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CL3_DICDI (Probable 4-coumarate--CoA ligase 3 OS=Dictyostelium discoideum GN=4cl3 PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.901e-25
Identity = 65/183 (35.52%), Postives = 102/183 (55.74%), Query Frame = 1
Query:   79 LHFTVLSEADEDQIPEVAIK-PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELENALRSRVP-QAILGQGYGMTKAGP 621
            + F  L+  +    P V I    D   +PFSSGTTGL KGV L+H +L+++  Q    E  + Y  N D V+ VLP FH + L   ++  ++ G  ++ + KFE    LELI++++V+             K+P+V  +DLSS+R +  GAAPLG E+E+ ++ R   + ++ QGYG T+  P
Sbjct:  175 MSFNQLTNNNGKDYPIVRIDLTKDTAIIPFSSGTTGLFKGVCLSHYNLVSNTYQTQTIET-STYKKN-DSVIGVLPFFHSFGLMLHIMLMVKQGYRIVTLPKFEPVRFLELIKKYKVAMSFIVPPIAIMFAKSPIVDKFDLSSLRTLFCGAAPLGSEIEDLIKERFKGRLVIKQGYGATELSP 355          

HSP 2 Score: 32.7278 bits (73), Expect = 2.901e-25
Identity = 17/45 (37.78%), Postives = 26/45 (57.78%), Query Frame = 2
Query:  665 KSRSWGPVLEMLNSKFWTPETGASLPQIHPGKICPRGPQI*KGFF 799
            KS S G +L  L +K  + ETG +L     G+IC +GP +  G++
Sbjct:  366 KSGSSGTLLPNLLAKIISSETGENLGMGEKGEICIKGPNVMLGYY 410          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.847e-24
Identity = 54/159 (33.96%), Postives = 89/159 (55.97%), Query Frame = 1
Query:  145 DPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVV-LCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRV--VLSGAAPLGKELENALRSRVPQAILGQGYGMTK 612
            D  ALPFSSGTTGL KGV+LTH++LI ++   + G    +    G +V L ++P FHIY +  +   +++    V+ M ++++   L  +  H VS             KNP+V ++DLS +++  V++ AAPL  EL  A  ++ P   + + YG+T+
Sbjct:  182 DLCALPFSSGTTGLQKGVMLTHRNLIANLCSTLFGVRSEMI---GQIVTLGLIPFFHIYGIVGICCATMKNKGKVVAMSRYDLRIFLNALIAHEVSFAPIVPPIILNLVKNPIVDEFDLSKLKLQSVMTAAAPLAPELLTAFEAKFPNVQVQEAYGLTE 337          

HSP 2 Score: 35.8094 bits (81), Expect = 6.847e-24
Identity = 18/45 (40.00%), Postives = 26/45 (57.78%), Query Frame = 2
Query:  665 KSRSWGPVLEMLNSKFWTPETGASLPQIHPGKICPRGPQI*KGFF 799
            K  S G +L  L  KF  P+TG SLP+   G++C R   + +G+F
Sbjct:  356 KRNSVGFILPNLEVKFIDPDTGRSLPKNTSGELCVRSQCVMQGYF 400          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.817e-22
Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = 1
Query:  133 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQ-----QVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELENALRSRVPQAILGQGYGMTKA 615
            +  DDP  L +SSGTTG  KGVV TH+SLI+ V       +++G +        +  LC +P+FH+Y L +     L  GA V+++ K+E+  +L  I  + V+              +P      L  +R VLSG APLGKEL    R + PQ  + QGYG+T++
Sbjct:  196 VTQDDPATLLYSSGTTGPSKGVVATHRSLISMVQIIMTRFRLEGSDKT------ETFLCTVPMFHVYGLVAFATGLLGCGATVVVLSKYELPEMLRSINAYGVTYLPLVPPILVAMVAHPK--PLPLGQMRKVLSGGAPLGKELIEGFREKYPQVEILQGYGLTES 353          

HSP 2 Score: 29.261 bits (64), Expect = 7.817e-22
Identity = 12/33 (36.36%), Postives = 21/33 (63.64%), Query Frame = 2
Query:  704 SKFWTPETGASLPQIHPGKICPRGPQI*KGFFE 802
            +K   P++G +LP    G++  RGP + KG+F+
Sbjct:  381 AKIVDPDSGEALPVNRTGELWIRGPYVMKGYFK 413          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.433e-21
Identity = 64/201 (31.84%), Postives = 111/201 (55.22%), Query Frame = 1
Query:  124 EVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLI--TSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELENALRSRVPQAILGQGYGMTK-AGPVLSMCLGFAKHPFLQVQIMGPRVRNAELKVLD 717
            +V +   DP A+ FSSGTTG  KGV+LTH++LI  T+V+ Q   ++P  Y   G   L  LPLFH++    +++ ++  G  ++L+ +FE+ A+ + +++++V+             K+ +   YDL S+R +  G APLGK++    + + P   + QGYG+T+ +GP  S    F     ++   +G    N E K++D
Sbjct:  198 QVQVNQSDPAAILFSSGTTGRVKGVLLTHRNLIASTAVSHQRTLQDPVNYDRVG---LFSLPLFHVFGF-MMMIRAISLGETLVLLGRFELEAMFKAVEKYKVTGMPVSPPLIVALVKSELTKKYDLRSLRSLGCGGAPLGKDIAERFKQKFPDVDIVQGYGLTESSGPAAST---FGPEEMVKYGSVGRISENMEAKIVD 391          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.341e-19
Identity = 71/229 (31.00%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   37 DFTVITIDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNL-YLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPM-VADYDLSSVRVVLSGAAPLGKELENALRSRVPQAILGQGYGMTKAGPVLSMCLGFAKHPFLQVQIMGPRVRNAELKVLD 717
            DF  I I+ P      F  + +     +P+  IK DD  A+ +SSGTTG  KGV+LTH++LI S+   V  E     Y  + +V L  LPL HIY L+  ++  L  G+ +++M++F+   ++ +I+R +++             K    V      S++ V SGAAPL ++        +P   L QGYGMT++  V +   GF      +   +G    N + KV+D
Sbjct:  174 DFDSIRIENPK-----FYSIMKESFGFVPKPLIKQDDVAAIMYSSGTTGASKGVLLTHRNLIASMELFVRFEASQYEYPGSSNVYLAALPLCHIYGLSLFVMGLLSLGSTIVVMKRFDASDVVNVIERFKITHFPVVPPMLMALTKKAKGVCGEVFKSLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTR--GFNSEKLSRYSSVGLLAPNMQAKVVD 395          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.987e-19
Identity = 61/204 (29.90%), Postives = 108/204 (52.94%), Query Frame = 1
Query:  118 IPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVV-LCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLS--SVRVVLSGAAPLGKELENALRSRVPQAILGQGYGMTKAGPV-LSMCLGFAKHPFLQVQIMGPRVRNAELKVLD 717
            +P  A +  D  ALP+SSGTTG+ KGV+L+H++L++++   +    P    T G VV L ++P FHIY +  +   +LR    V++M +F++   L  +  HRV              K+P+  ++DLS  +++ V++ AAPL  +L  A + + P   + + YG+T+   + L+   G       +   +G  + N E+K +D
Sbjct:  184 VPVDAAQQSDLCALPYSSGTTGVSKGVMLSHRNLVSNLCSSMFAVAPE---TAGQVVTLGLMPFFHIYGITGICCATLRHKGTVVVMDRFDLRTFLRALVDHRVMFAPLVPPVMLAMVKSPVADEFDLSDLALKSVMTAAAPLAPDLLAAFQRKFPGVQVEEAYGLTEHSCITLTHAAGDGHGHVAKKSSVGFILPNLEVKFVD 384          
BLAST of EY680350 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.448e-19
Identity = 46/163 (28.22%), Postives = 88/163 (53.99%), Query Frame = 1
Query:  133 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNP--MVADYDLSSVRVVLSGAAPLGKELENALRSRVPQAILGQGYGMTKA 615
            +  DD   + +SSGTTG  KGV+ +H++L   VA+ +        L   D+ +C +P+FH Y L +  + ++  G+ V+++++F++  +++ +++HR +              +   + A YDLSS++ V  G APL KE+      + P   + QGY +T++
Sbjct:  194 VNQDDTAMMLYSSGTTGPSKGVISSHRNLTAHVARFISDN-----LKRDDIFICTVPMFHTYGLLTFAMGTVALGSTVVILRRFQLHDMMDAVEKHRATALALAPPVLVAMINDADLIKAKYDLSSLKTVRCGGAPLSKEVTEGFLEKYPTVDILQGYALTES 351          

HSP 2 Score: 23.8682 bits (50), Expect = 9.448e-19
Identity = 11/41 (26.83%), Postives = 21/41 (51.22%), Query Frame = 2
Query:  680 GPVLEMLNSKFWTPETGASLPQIHPGKICPRGPQI*KGFFE 802
            G +   + ++   P TG  +     G++  +GP I KG+F+
Sbjct:  371 GTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGYFK 411          
The following BLAST results are available for this feature:
BLAST of EY680350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
4CL1_DICDI5.184e-2837.70Probable 4-coumarate--CoA ligase 1 OS=Dictyosteliu... [more]
4CL1_SOYBN2.523e-2652.034-coumarate--CoA ligase 1 (Fragment) OS=Glycine ma... [more]
4CLL7_ARATH5.970e-2634.804-coumarate--CoA ligase-like 7 OS=Arabidopsis thal... [more]
4CL3_DICDI2.901e-2535.52Probable 4-coumarate--CoA ligase 3 OS=Dictyosteliu... [more]
4CLL1_ARATH6.847e-2433.964-coumarate--CoA ligase-like 1 OS=Arabidopsis thal... [more]
4CLL4_ORYSJ7.817e-2235.544-coumarate--CoA ligase-like 4 OS=Oryza sativa sub... [more]
4CLL9_ARATH1.433e-2131.844-coumarate--CoA ligase-like 9 OS=Arabidopsis thal... [more]
4CLL6_ARATH1.341e-1931.004-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
4CLL9_ORYSJ2.987e-1929.904-coumarate--CoA ligase-like 9 OS=Oryza sativa sub... [more]
4CLL4_ARATH9.448e-1928.224-coumarate--CoA ligase-like 4 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-B06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680350 ID=EY680350; Name=EY680350; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGCGACAGGTTGCCGAAGACGGACAAAGATTTCACAGTGAT
CACGATCGATGCCCCTCCGGAGAATTGCCTGCATTTCACAGTGTTATCGG
AAGCAGATGAGGATCAAATCCCAGAAGTTGCCATCAAGCCCGACGATCCT
GTGGCGTTGCCCTTCTCTTCGGGCACCACGGGATTGCCTAAAGGAGTGGT
GCTGACGCACAAGAGCTTGATCACCAGCGTGGCGCAGCAAGTGGATGGAG
AGAACCCGAATCTTTACTTGACAAACGGAGACGTTGTGCTGTGCGTTTTA
CCTTTGTTTCACATTTATTCGTTGAACAGCGTGCTTCTGTGCTCGTTGAG
AGCTGGGGCTGGGGTTCTGTTGATGCAGAAGTTTGAGATAGGGGCGCTGC
TGGAGCTGATACAGCGGCACAGGGTGTCGGTGGCGGCTGTGGTGCCGCCC
TTGGTGCTGGCGCTGGCCAAGAACCCGATGGTGGCGGATTATGACCTGAG
CTCGGTCAGGGTGGTGCTTTCCGGGGCGGCGCCGCTGGGGAAGGAGCTTG
AAAATGCTCTCCGAAGTAGAGTCCCTCAAGCAATCTTGGGTCAGGGATAT
GGAATGACAAAGGCAGGGCCAGTGCTATCAATGTGCCTAGGATTTGCAAA
GCACCCTTTTCTACAAGTCCAGATCATGGGGCCCCGTGTTAGAAATGCTG
AACTCAAAGTTTTGGACCCCTGAAACGGGGGCCTCCCTTCCCCAAATCCA
CCCGGGGAAAATTTGCCCCCGCGGCCCCCAAATTTAGAAAGGGTTCTTTG
AATGTTCCGGAGGGGACTGGGGGGGAAATTAAAA
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