EY674761

Overview
NameEY674761
Unique NameEY674761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674761 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.608e-12
Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = 2
Query:   11 ESSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRPPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTAL 448
            +++ ILLD    P+L+DFGL KL    D+    +  +   GY  PE       TL+SDVYSFGVV LEL++G+K         E +LV W R L +  +   +  DP +Q   P   + +A+ +  +C  +    RP +  VV  L
Sbjct:  647 KAATILLDSSQEPRLADFGLVKLL---DEQFPGSESLD--GYTPPEQERNASPTLESDVYSFGVVLLELVSGKKP--------EGDLVNWVRGLVRQGQGL-RAIDPTMQETVPEDEIAEAVKIGYLCTADLPWKRPTMQQVVGLL 778          
BLAST of EY674761 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.037e-12
Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 2
Query:    2 HASESSN-ILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRV--MGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRK--AIDNTRPPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQ 466
            H   SSN ILLD+ F  +++D+GLAKL    D    S     +G  GY APEY+ T   +LK DVY FG+V LEL+TG+K  ++ N     + +LV W        R      D  +  +     + Q L +A  C+  +   RP +  V  +L  +A +
Sbjct:  424 HQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRS-KDAIDRSICDKGHDEEILQFLKIACSCVVSRPKERPTMIQVYESLKNMADK 582          
BLAST of EY674761 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.886e-11
Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 2
Query:   11 ESSNILLDEGFHPKLSDFGLAKLG------PVGDKTHVSTR-VMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAI 238
            +SSN+LLDE   PKL DFGLA+L       P    +   TR V GT  Y   EY  TG+L + +D +SFGVV LE + G++A+
Sbjct:  342 KSSNVLLDERLMPKLGDFGLARLSRFTGANPGQSSSVARTRTVRGTLAYLPEEYVKTGRLAVDTDTFSFGVVLLETLAGQRAV 424          
BLAST of EY674761 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.886e-11
Identity = 47/153 (30.72%), Postives = 73/153 (47.71%), Query Frame = 2
Query:   14 SSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRPPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRG-LYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQT 469
            +SNILLDE  +  ++D+GL++L      T+V     GT GY APE++     + K+DVYS G++ LEL+TG+       P    +L  W   + K+          L++    +   L   L +A  C+    A RP    VV  L  +  +T
Sbjct:  664 ASNILLDEQTNAHIADYGLSRLMTAAAATNVIATA-GTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSP---GEPTNGMDLPQWVASIVKEEWTNEVFDLELMRETQSVGDELLNTLKLALHCVDPSPAARPEANQVVEQLEEIRPET 812          
The following BLAST results are available for this feature:
BLAST of EY674761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
Y5815_ARATH3.608e-1234.25Probably inactive leucine-rich repeat receptor-lik... [more]
Y1719_ARATH8.037e-1233.75Probable inactive receptor kinase At1g27190 OS=Ara... [more]
IRAK1_BOVIN8.886e-1145.78Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
IMK2_ARATH8.886e-1130.72Probably inactive leucine-rich repeat receptor-lik... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-B05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674761 ID=EY674761; Name=EY674761; organism=Citrus sinensis; type=EST; length=1010bp
CCACGCGTCCGAATCATCAAATATACTCCTTGATGAGGGTTTCCACCCTA
AGTTATCAGATTTTGGGCTTGCAAAACTGGGGCCTGTTGGTGACAAAACC
CATGTATCCACTCGTGTAATGGGTACATATGGTTATTGTGCACCAGAGTA
TGCTATGACTGGCCAACTCACTCTAAAGTCAGATGTGTACAGTTTTGGAG
TTGTCTTTCTTGAACTTATCACTGGGCGCAAGGCTATTGATAATACACGG
CCTCCTGGAGAACATAATCTTGTTGCCTGGGCACGACCACTCTTCAAGGA
TCGCAGGAAATTTCCCAAAATGGCTGATCCACTATTGCAAGGTCGCTATC
CAATGCGAGGACTGTACCAAGCTCTTGCAGTTGCAGCCATGTGCTTGCAG
GAGCAAGCTGCTACGAGGCCTCTAATAGGTGATGTTGTGACAGCTCTTAC
ATATTTAGCCTCCCAAACCTATGACCCCAAATGCAGCCAGCAACCTGAGC
AATAGAGTTGGTCCATCTACTCCTAGGAATAGGGACGACCGAAAAAGTAT
GGCAGATGGGCAGGATAGTCCAAAAGAACTTGGACGTGTTGGGCGGGATG
GCTCGCCCTCCACTCCAAAAAAATTCCCTGATTACAGGGAAAAGGACCCA
TCCAAGGAATGGAAGTACTGGGGCAAAATTTAACCAGGAAGAAAACTGGG
GGGCGGGTCGGGGAAAAAAAGGGGTGGGAAAATGATTTTAAAACGAAAGG
GAATCCCAAAAAAACCACCCCTTGAAAATTACCCGGGGAAAAACTTGGGA
AACCCCCAAAGGAAAACCTGATTTTTAAAAAAAAAAAAGCGGGGGCGGGG
GGGCACCGGCGAAAAAAAATTTGGGGGGGGGAGAAAATGGGTAAAAAAAA
AAAAAAAAAAACAAACAAAAAATTTGCCCTTATGGGGGAAAAATTTTTTT
TTTTAGGGGGGAAAACAAAAAAAATAAAAAATTAATTTTTTTACTCCCAC
CCCCCATAAA
back to top