EY720473

Overview
NameEY720473
Unique NameEY720473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STRAW (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Streptomyces avermitilis GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.930e-45
Identity = 99/231 (42.86%), Postives = 144/231 (62.34%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPRA--RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            LVSL KG+E  +   MSE++E++A     RI V++GPNLARE+A     A V+A  +E + +R+QA  H   FR Y + D  G ELGGA+KNV  +  G+A  +G+G+N K  LITR LAE TR  +  GA+P+TF GLAG+GDL+ TCSSP SRN+  G  LG+G++L++ +    + AEGV + + +   A+  GV MP+   +  I+ EG+     ++ LM    K +
Sbjct:  104 LVSLMKGVELGSAMRMSEVVEDVAKVGADRIAVVTGPNLAREIAARMPAAAVVACANEAVAQRLQAACHTPYFRPYTNTDVVGCELGGAVKNVIGLAVGIADGMGLGDNAKGSLITRGLAETTRLGLVMGADPLTFSGLAGLGDLVATCSSPLSRNHTFGTNLGRGMTLQETIAVTKQTAEGVKSCESVLDLARRHGVDMPITETVVGIVHEGKPPVVALKELMSRSAKPE 334          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_LISMO (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Listeria monocytogenes GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.930e-45
Identity = 101/245 (41.22%), Postives = 147/245 (60.00%), Query Frame = -3
Query:    1 CSRLTSDGLAGKXLVSLTKGIEAHTFKLMSEILEE---IAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 726
            C +L         LV ++KGIE  T   MSE++EE    A R  + VLSGP+ A EVA    T    + +D    E VQ        R+Y + D  G E+GGALKN+ A+ AG++  LG G+N K+ L+TR +AE+TR  V  G+NP TF GL G+GDLIVTC+S  SRN++ G  LG+G +L++ + ++G V EGV T K +   A+++ + MP+   ++AILFE +   + ++LLM  E K +
Sbjct:   90 CKQLNEALKEPTILVHVSKGIEPETNLRMSEVIEEEIDAAKRKALVVLSGPSHAEEVALRHPTTLCASCKDLSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSNPQTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGKGENLDEVLEKMGMVVEGVRTAKAVHGWAKKLDIDMPITESIYAILFENKDAREAVDLLMGREKKIE 334          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_LEPIN (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Leptospira interrogans GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.930e-45
Identity = 97/232 (41.81%), Postives = 150/232 (64.66%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPR---ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +VS +KGIE  T +L+SEI E   P    + +  LSGP+ A+E+ +   T   IAS++E    +VQ +     FR Y + D  GVE+GG+LKNV A+ AG++  LG G+NT++ LITR L E+T+  +  GA+PMTFLG +G+GDLI+TC   +SRN  VGF LG+G +LE  ++ + EVAEGV T +     +Q++G+ M +   ++ +L+EG+   +V++ LM+ + K +
Sbjct:  100 IVSASKGIENGTLRLVSEIFESELPEKYHSYLSYLSGPSFAKEIIQKVPTIVSIASKNETTARKVQEIFSFLYFRTYWTPDVIGVEVGGSLKNVIALAAGVSDGLGFGQNTRAALITRGLNEITKIGLKLGADPMTFLGPSGMGDLILTCCGEQSRNRTVGFRLGKGETLEQILSSMNEVAEGVKTTQSAYELSQKLGIEMAITNEVYKMLYEGKNPREVVKDLMKRDLKRE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_LEPIC (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.930e-45
Identity = 97/232 (41.81%), Postives = 150/232 (64.66%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPR---ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +VS +KGIE  T +L+SEI E   P    + +  LSGP+ A+E+ +   T   IAS++E    +VQ +     FR Y + D  GVE+GG+LKNV A+ AG++  LG G+NT++ LITR L E+T+  +  GA+PMTFLG +G+GDLI+TC   +SRN  VGF LG+G +LE  ++ + EVAEGV T +     +Q++G+ M +   ++ +L+EG+   +V++ LM+ + K +
Sbjct:  100 IVSASKGIENGTLRLVSEIFESELPEKYHSYLSYLSGPSFAKEIIQKVPTIVSIASKNETTARKVQEIFSFLYFRTYWTPDVIGVEVGGSLKNVIALAAGVSDGLGFGQNTRAALITRGLNEITKIGLKLGADPMTFLGPSGMGDLILTCCGEQSRNRTVGFRLGKGETLEQILSSMNEVAEGVKTTQSAYELSQKLGIEMAITNEVYKMLYEGKNPREVVKDLMKRDLKRE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_YERE8 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.520e-45
Identity = 96/231 (41.56%), Postives = 148/231 (64.07%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPRA-RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLH-GRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +V  TKG+EA T +L++++  E+   +  + V+SGP  A+E+A    TA  +AS D +  E +Q +LH G++FRVY++ D  GV+LGGA+KNV AI AGM+  +G G N ++ LITR LAEMTR     GA+P TF+G+AG+GDL++TC+  +SRN + G  LGQGL +++A  ++G+V EG    K + A AQ  GV MP+   ++ +L+  +   +    L+    K +
Sbjct:  105 IVWATKGLEAETGRLLADVAREVLGESIPLAVVSGPTFAKELAAGLPTAIALASTDVQFSEDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMTRLGSALGADPSTFMGMAGLGDLVLTCTDNQSRNRRFGIMLGQGLGVQEAQDKIGQVVEGYRNTKEVLALAQRNGVEMPITEQIYQVLYSHKNAREAALTLLGRTKKDE 335          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_MOOTA (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Moorella thermoacetica (strain ATCC 39073) GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.520e-45
Identity = 99/231 (42.86%), Postives = 141/231 (61.04%), Query Frame = -3
Query:    4 GKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKT 696
            G  +V+  KG+E  T K +S++L E     R+ VLSGP+ A EV     T  V+A+ D E  E VQ V    TFRVY + D  GVE GGALKN+ A+  GMA  LG+G+NT++ L+TR +AE+ R  V  G   +TF GL+G+GDLIVTC+S  SRN + G  LG+G SLE+ +  +G V EGV T    +  A + G+ MP+   ++ +L++G+ +   +  LM   P+T
Sbjct:   99 GTVVVNTAKGLELETKKRLSQVLVEEG-LDRVAVLSGPSHAEEVGRGLPTTVVVAAADRETAEYVQDVFMDPTFRVYTNPDIIGVEFGGALKNIIALATGMADGLGLGDNTRAALMTRGMAEIARLGVALGGKVLTFAGLSGIGDLIVTCTSMYSRNRRAGILLGKGQSLEEVLDAVGMVVEGVRTTAAARELACQHGIKMPITEEIYQVLYKGKPVGDCVAALME-RPRT 327          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_BACA2 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus amyloliquefaciens (strain FZB42) GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.520e-45
Identity = 100/224 (44.64%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   22 VSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLM 684
            V ++KGIE  +   +SE++EE  P   R  I VLSGP+ A EV     T    +S++ +  E VQ +   + FRVY + D  GVE+GGALKN+ A+ AG+   LG G+N K+ LITR LAE+ R     G NP+TF GL GVGDLIVTC+S  SRN++ G  LG+G  LE  + ++G V EGV T K     +Q+  V MP+   LH +LF G+ +   +E LM
Sbjct:  102 VHVSKGIEPDSLLRISELMEEELPEEYRKDIVVLSGPSHAEEVGLRHPTTVTSSSKNIKAAEAVQDLFMNQHFRVYTNPDMIGVEIGGALKNIIALAAGITDGLGYGDNAKAALITRGLAEIARLGTKMGGNPLTFSGLTGVGDLIVTCTSVHSRNWRAGNLLGKGYKLEAVLDKMGMVVEGVRTTKAAYQLSQKYQVKMPITEALHQVLFNGQKVETAVESLM 325          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_YERPY (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.291e-45
Identity = 95/211 (45.02%), Postives = 140/211 (66.35%), Query Frame = -3
Query:   61 LVSLTKGIEAHTFKLMSEILEEIAPRA-RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLH-GRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILF 687
            +V  TKG+EA T +L+ ++  E+   A  + V+SGP  A+E+A    TA  +AS D +  E +Q +LH G++FRVY++ D  GV+LGGA+KNV AI AGM+  +G G N ++ LITR LAEMTR     GA+P TF+G+AG+GDL++TC+  +SRN + G  LGQGL +++A   +G+V EG    K + A AQ  GV MP+   ++ +L+
Sbjct:  105 IVWATKGLEAETGRLLQDVAREVLGEAIPLAVISGPTFAKELAAGLPTAIALASTDVQFSEDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMTRLGTALGADPSTFMGMAGLGDLVLTCTDNQSRNRRFGIMLGQGLGVKEAQDNIGQVVEGYRNTKEVLALAQRHGVEMPITEQIYQVLY 315          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_YERPS (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Yersinia pseudotuberculosis GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.291e-45
Identity = 95/211 (45.02%), Postives = 140/211 (66.35%), Query Frame = -3
Query:   61 LVSLTKGIEAHTFKLMSEILEEIAPRA-RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLH-GRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILF 687
            +V  TKG+EA T +L+ ++  E+   A  + V+SGP  A+E+A    TA  +AS D +  E +Q +LH G++FRVY++ D  GV+LGGA+KNV AI AGM+  +G G N ++ LITR LAEMTR     GA+P TF+G+AG+GDL++TC+  +SRN + G  LGQGL +++A   +G+V EG    K + A AQ  GV MP+   ++ +L+
Sbjct:  105 IVWATKGLEAETGRLLQDVAREVLGEAIPLAVISGPTFAKELAAGLPTAIALASTDVQFSEDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMTRLGTALGADPSTFMGMAGLGDLVLTCTDNQSRNRRFGIMLGQGLGVKEAQDNIGQVVEGYRNTKEVLALAQRHGVEMPITEQIYQVLY 315          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_YERPP (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Yersinia pestis (strain Pestoides F) GN=gpsA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.291e-45
Identity = 95/211 (45.02%), Postives = 140/211 (66.35%), Query Frame = -3
Query:   61 LVSLTKGIEAHTFKLMSEILEEIAPRA-RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLH-GRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILF 687
            +V  TKG+EA T +L+ ++  E+   A  + V+SGP  A+E+A    TA  +AS D +  E +Q +LH G++FRVY++ D  GV+LGGA+KNV AI AGM+  +G G N ++ LITR LAEMTR     GA+P TF+G+AG+GDL++TC+  +SRN + G  LGQGL +++A   +G+V EG    K + A AQ  GV MP+   ++ +L+
Sbjct:  105 IVWATKGLEAETGRLLQDVAREVLGEAIPLAVISGPTFAKELAAGLPTAIALASTDVQFSEDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMTRLGTALGADPSTFMGMAGLGDLVLTCTDNQSRNRRFGIMLGQGLGVKEAQDNIGQVVEGYRNTKEVLALAQRHGVEMPITEQIYQVLY 315          
The following BLAST results are available for this feature:
BLAST of EY720473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPDA_STRAW1.930e-4542.86Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_LISMO1.930e-4541.22Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Li... [more]
GPDA_LEPIN1.930e-4541.81Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Le... [more]
GPDA_LEPIC1.930e-4541.81Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Le... [more]
GPDA_YERE82.520e-4541.56Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ye... [more]
GPDA_MOOTA2.520e-4542.86Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Mo... [more]
GPDA_BACA22.520e-4544.64Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ba... [more]
GPDA_YERPY3.291e-4545.02Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ye... [more]
GPDA_YERPS3.291e-4545.02Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ye... [more]
GPDA_YERPP3.291e-4545.02Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ye... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720473 ID=EY720473; Name=EY720473; organism=Citrus sinensis; type=EST; length=860bp
ATCGGTCTTCGGCTCGGCCCGCATCAGCAACTCGATGACCTGGTTCAAGG
TGCGCCCTTCAAACAGGATCGCGTGCAAACCCGCGACCAGCGGCATATAC
ACCCCGACTTCCTGAGCCTTGGCCTTCAGCACCTTCAGGGTGTTGACGCC
TTCGGCCACTTCGCCCAAACGCGTCACGGCGTCTTCCAGGCTCAGGCCCT
GGCCGAGGGCAAAACCGACCTGATAGTTGCGGCTTTTCGGTGACGAGCAG
GTGACGATCAGGTCGCCCACACCCGCCAGGCCAAGGAAGGTCATCGGGTT
GGCGCCCTGGTTGACCGCAAAGCGCGTCATCTCGGCCAAGGCACGGGTGA
TCAGCATGCTCTTGGTGTTTTCGCCCATGCCCAGCGCAACCGCCATGCCG
GCGATGATCGCGTAGACGTTTTTTAACGCCCCGCCCAGTTCGACGCCGAA
GCGGTCAGCACTGGCGTAAACGCGGAAGGTGCGACCGTGCAGCACTGCCT
GCACCCGCTCGCAGAGTTCTTCGTCTTCACTCGCGATCACGGTGGCGGTC
AGGGCGTGCTCAGCCACTTCCCGCGCCAGGTTCGGTCCGGACAACACGCC
AATGCGCGCTCGGGGGGCGATTTCTTCAAGGATTTCGCTCATCAACTTGA
AGGTGTGCGCCTCGATGCCCTTGGTCAGGCTGACCAGCANCTTGCCCGCC
AACCCGTCGGAGGTGAGGCGCGAGCACCGAACGCAAGGCACTGGATGGCC
AACCGACGAAACACAAGTCGCACTCGGTCAACGTCGCCAGCAAATCTGTC
GACGGCTCAACAGGGGGCAGATTCTTGATTCCTTTAGGGAACCGGGGGGT
TTCCCGGTTT
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