EY720473

Overview
NameEY720473
Unique NameEY720473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_SACD2 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gpsA PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.159e-72
Identity = 135/229 (58.95%), Postives = 179/229 (78.17%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            ++S TKGI+A  F LMS+ILE+     RIGVLSGPN A+E+ ++  T +V+ASE +E+ + VQ V    TFR+Y++ DR+GVELGGALKN+YA++ GMA ALG G NT +ML+TR+LAEM RFA   GA+ MTFLGLAG+GDL++TC+S  SRNY+VGFA+G+G SLE AV  +G+VAEGVNTL+++K KA+E+ VYMPLV GLHA+LF+ + L QVI+ LM  E  +D
Sbjct:  123 VISTTKGIDADGFFLMSQILEQELTDVRIGVLSGPNFAKEIVQNQYTGSVVASEHDEVLKCVQQVFSSNTFRIYSNPDRYGVELGGALKNIYAMVTGMAAALGCGHNTMAMLLTRSLAEMGRFARELGADSMTFLGLAGMGDLVLTCTSDLSRNYRVGFAVGRGKSLEQAVQEIGQVAEGVNTLRIVKKKAEELNVYMPLVDGLHAVLFDKQDLQQVIQGLMTGEMSSD 351          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_TERTT (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gpsA PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.200e-71
Identity = 132/229 (57.64%), Postives = 176/229 (76.86%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            ++S TKGIE  +F LMS+ILE+     RIGVLSGPN A+E+ ++  T +VIASE + + + +Q V   +TFR+YA+ DR+GVELGGALKN+YAI+ GMA ALG G NT++ML+TR+LAEMTR A   GAN MTFLGLAGVGDLI+TC+S  SRNY+VG+A+G+G SL   +  +G+VAEGVNT+K++K KA E+G+YMPLV GLH +LFEG+ + +V+  LM     +D
Sbjct:  104 VLSTTKGIEGESFLLMSQILEQELGNVRIGVLSGPNFAKEIIQNQFTGSVIASEHDSVIQCIQQVFASKTFRIYANTDRYGVELGGALKNIYAIVTGMAAALGCGSNTQAMLLTRSLAEMTRLATALGANGMTFLGLAGVGDLILTCTSDLSRNYRVGYAIGKGESLAQVLDNIGQVAEGVNTVKIVKDKADEMGIYMPLVTGLHEVLFEGKDILEVVTGLMTGAMASD 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ALCBS (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gpsA PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 8.601e-70
Identity = 137/229 (59.83%), Postives = 170/229 (74.24%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            ++S TKGI A  F LMSE+L +  P  RIGVLSGPNLA+EV E   T TVIAS DE L + VQ  L    FRVY + D +GVELGGALKN+YA+ +GMA A+G+GEN++S LITRALAEM+RFAV  GANPMTFLGL+GVGDLI TC+S  SRNYQVGF LG+G +LE A+  LG+ AEG+NT+K++  KA E+ VYMPL   L+ I++ G+ L  +I+ LM  E K D
Sbjct:  105 VISCTKGIYADGFLLMSELLHQYWPHTRIGVLSGPNLAKEVVEQKFTGTVIASPDETLRQTVQNALSCDYFRVYDNPDIYGVELGGALKNIYAVASGMAAAIGVGENSRSFLITRALAEMSRFAVKLGANPMTFLGLSGVGDLIATCTSSLSRNYQVGFQLGEGKTLEQAIECLGQTAEGINTIKLVADKAAELDVYMPLATALYKIVYHGQPLELMIQNLMSGEYKHD 333          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_PSYA2 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=gpsA PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.418e-66
Identity = 128/234 (54.70%), Postives = 172/234 (73.50%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            ++G+ +VSLTKG+E  TF LMS+I++E  P    GV+SGPNLA E+ ++  +ATVIASE E L   VQA LH   FRV+AS D  GVELGGALKN+YAI  GMA A  +GENTK+M++TR LAEM+RF V+ GANP+TFLGL+GVGDL  TCSS  SRNY++G  LG+G++++ AV +LG+ AEGVNT++ +  KA + G+YMP+   LHA+++E +    V   LM A  ++D
Sbjct:  163 ISGQSIVSLTKGMEKDTFALMSDIIKEELPEVNFGVMSGPNLAIEIMKNMPSATVIASESEPLRHAVQAALHSAFFRVFASDDIRGVELGGALKNIYAIAMGMAAAYEVGENTKAMILTRGLAEMSRFGVHAGANPLTFLGLSGVGDLYATCSSELSRNYRIGNMLGRGMTIDAAVKKLGQTAEGVNTIQQVHEKATKEGIYMPITHALHAVIYEDKAALGVALHLMEAGFRSD 396          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ACIAD (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Acinetobacter sp. (strain ADP1) GN=gpsA PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.841e-66
Identity = 127/234 (54.27%), Postives = 166/234 (70.94%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            +  + +VSLTKGIEA+TF  MS+I+ E  P    GVLSGPNLA+E+     + TVIAS+ E +   VQ  LH   FRV+ S D  GVELGGALKN+YAI  GMA A  +GENTKSM+ITRALAEM+RFAV  GANP+TFLGL+GVGDL  TC+SP SRNYQ+G+ALG G +L+ A+  LG+ AEG+NT+  ++ +A E+ VYMP+   L+ ++FEG     +   LM+   ++D
Sbjct:  114 ITAQAIVSLTKGIEANTFSFMSDIIREELPEVPYGVLSGPNLAKEIVAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAIAMGMAAAYNIGENTKSMIITRALAEMSRFAVKLGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLDQAIKALGQTAEGINTIVQVRTRAIELDVYMPITNALYEVIFEGAPPLNIALALMKNGHRSD 347          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ACIBS (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Acinetobacter baumannii (strain SDF) GN=gpsA PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.285e-65
Identity = 127/234 (54.27%), Postives = 165/234 (70.51%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            +  + +VSLTKGIEA TF  MS+I+ E  P    GVLSGPNLA+E+     + TVIAS+ E +   VQ  LH   FRV+ S D  GVELGGALKN+YA+  G+  A  +GENTKSM++TRALAEM+RFAV QGANP+TFLGL+GVGDL  TC+SP SRNYQ+G+ALG G +LE A   LG+ AEG+NT+  ++ KAQE+ VYMP+   L+ ++FEG     +   LM+   ++D
Sbjct:  114 ITAQAVVSLTKGIEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGINTIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSD 347          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ACIBY (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Acinetobacter baumannii (strain AYE) GN=gpsA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.679e-65
Identity = 126/234 (53.85%), Postives = 165/234 (70.51%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            +  + +VSLTKG+EA TF  MS+I+ E  P    GVLSGPNLA+E+     + TVIAS+ E +   VQ  LH   FRV+ S D  GVELGGALKN+YA+  G+  A  +GENTKSM++TRALAEM+RFAV QGANP+TFLGL+GVGDL  TC+SP SRNYQ+G+ALG G +LE A   LG+ AEG+NT+  ++ KAQE+ VYMP+   L+ ++FEG     +   LM+   ++D
Sbjct:  114 ITAQAVVSLTKGVEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGINTIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSD 347          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ACIBT (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=gpsA PE=3 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.679e-65
Identity = 126/234 (53.85%), Postives = 165/234 (70.51%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            +  + +VSLTKG+EA TF  MS+I+ E  P    GVLSGPNLA+E+     + TVIAS+ E +   VQ  LH   FRV+ S D  GVELGGALKN+YA+  G+  A  +GENTKSM++TRALAEM+RFAV QGANP+TFLGL+GVGDL  TC+SP SRNYQ+G+ALG G +LE A   LG+ AEG+NT+  ++ KAQE+ VYMP+   L+ ++FEG     +   LM+   ++D
Sbjct:  114 ITAQAVVSLTKGVEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGINTIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSD 347          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ACIBC (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Acinetobacter baumannii (strain ACICU) GN=gpsA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.679e-65
Identity = 126/234 (53.85%), Postives = 165/234 (70.51%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            +  + +VSLTKG+EA TF  MS+I+ E  P    GVLSGPNLA+E+     + TVIAS+ E +   VQ  LH   FRV+ S D  GVELGGALKN+YA+  G+  A  +GENTKSM++TRALAEM+RFAV QGANP+TFLGL+GVGDL  TC+SP SRNYQ+G+ALG G +LE A   LG+ AEG+NT+  ++ KAQE+ VYMP+   L+ ++FEG     +   LM+   ++D
Sbjct:  114 ITAQAVVSLTKGVEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGINTIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSD 347          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ACIB5 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Acinetobacter baumannii (strain AB0057) GN=gpsA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.679e-65
Identity = 126/234 (53.85%), Postives = 165/234 (70.51%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            +  + +VSLTKG+EA TF  MS+I+ E  P    GVLSGPNLA+E+     + TVIAS+ E +   VQ  LH   FRV+ S D  GVELGGALKN+YA+  G+  A  +GENTKSM++TRALAEM+RFAV QGANP+TFLGL+GVGDL  TC+SP SRNYQ+G+ALG G +LE A   LG+ AEG+NT+  ++ KAQE+ VYMP+   L+ ++FEG     +   LM+   ++D
Sbjct:  114 ITAQAVVSLTKGVEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGINTIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSD 347          
The following BLAST results are available for this feature:
BLAST of EY720473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPDA_SACD23.159e-7258.95Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Sa... [more]
GPDA_TERTT1.200e-7157.64Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Te... [more]
GPDA_ALCBS8.601e-7059.83Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Al... [more]
GPDA_PSYA24.418e-6654.70Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ps... [more]
GPDA_ACIAD9.841e-6654.27Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ac... [more]
GPDA_ACIBS1.285e-6554.27Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ac... [more]
GPDA_ACIBY1.679e-6553.85Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ac... [more]
GPDA_ACIBT1.679e-6553.85Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ac... [more]
GPDA_ACIBC1.679e-6553.85Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ac... [more]
GPDA_ACIB51.679e-6553.85Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720473 ID=EY720473; Name=EY720473; organism=Citrus sinensis; type=EST; length=860bp
ATCGGTCTTCGGCTCGGCCCGCATCAGCAACTCGATGACCTGGTTCAAGG
TGCGCCCTTCAAACAGGATCGCGTGCAAACCCGCGACCAGCGGCATATAC
ACCCCGACTTCCTGAGCCTTGGCCTTCAGCACCTTCAGGGTGTTGACGCC
TTCGGCCACTTCGCCCAAACGCGTCACGGCGTCTTCCAGGCTCAGGCCCT
GGCCGAGGGCAAAACCGACCTGATAGTTGCGGCTTTTCGGTGACGAGCAG
GTGACGATCAGGTCGCCCACACCCGCCAGGCCAAGGAAGGTCATCGGGTT
GGCGCCCTGGTTGACCGCAAAGCGCGTCATCTCGGCCAAGGCACGGGTGA
TCAGCATGCTCTTGGTGTTTTCGCCCATGCCCAGCGCAACCGCCATGCCG
GCGATGATCGCGTAGACGTTTTTTAACGCCCCGCCCAGTTCGACGCCGAA
GCGGTCAGCACTGGCGTAAACGCGGAAGGTGCGACCGTGCAGCACTGCCT
GCACCCGCTCGCAGAGTTCTTCGTCTTCACTCGCGATCACGGTGGCGGTC
AGGGCGTGCTCAGCCACTTCCCGCGCCAGGTTCGGTCCGGACAACACGCC
AATGCGCGCTCGGGGGGCGATTTCTTCAAGGATTTCGCTCATCAACTTGA
AGGTGTGCGCCTCGATGCCCTTGGTCAGGCTGACCAGCANCTTGCCCGCC
AACCCGTCGGAGGTGAGGCGCGAGCACCGAACGCAAGGCACTGGATGGCC
AACCGACGAAACACAAGTCGCACTCGGTCAACGTCGCCAGCAAATCTGTC
GACGGCTCAACAGGGGGCAGATTCTTGATTCCTTTAGGGAACCGGGGGGT
TTCCCGGTTT
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