EY720473

Overview
NameEY720473
Unique NameEY720473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ACIB3 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Acinetobacter baumannii (strain AB307-0294) GN=gpsA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.679e-65
Identity = 126/234 (53.85%), Postives = 165/234 (70.51%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            +  + +VSLTKG+EA TF  MS+I+ E  P    GVLSGPNLA+E+     + TVIAS+ E +   VQ  LH   FRV+ S D  GVELGGALKN+YA+  G+  A  +GENTKSM++TRALAEM+RFAV QGANP+TFLGL+GVGDL  TC+SP SRNYQ+G+ALG G +LE A   LG+ AEG+NT+  ++ KAQE+ VYMP+   L+ ++FEG     +   LM+   ++D
Sbjct:  114 ITAQAVVSLTKGVEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGINTIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSD 347          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_PSYCK (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Psychrobacter cryohalolentis (strain K5) GN=gpsA PE=3 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 3.740e-65
Identity = 126/234 (53.85%), Postives = 172/234 (73.50%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            ++G+ +VSLTKG+E  TF LMS+I+++  P    GV+SGPNLA E+ ++  +ATVIASE E L   VQA LH   FRV+AS D  GVELGGALKN+YAI  GMA A  +GENTK+M++TR LAEM+RF V+ GANP+TFLGL+GVGDL  TCSS  SRNY++G  LG+G++++ AV +LG+ AEGVNT++ +  KA + G+YMP+   L+A+++E +    V   LM A  ++D
Sbjct:  163 ISGQSIVSLTKGMEKDTFSLMSDIIKDELPEVNFGVMSGPNLAIEIMKNMPSATVIASESEPLRHAVQAALHSAFFRVFASDDIRGVELGGALKNIYAIAMGMAAAYEVGENTKAMILTRGLAEMSRFGVHAGANPLTFLGLSGVGDLYATCSSELSRNYRIGNMLGRGMTIDAAVKKLGQTAEGVNTIQQVHEKATKEGIYMPITHALYAVIYEDKAALGVALHLMEAGFRSD 396          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_THETN (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Thermoanaerobacter tengcongensis GN=gpsA PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.353e-51
Identity = 113/243 (46.50%), Postives = 156/243 (64.20%), Query Frame = -3
Query:    7 RLTSDGLAGKX-----LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPK 720
            R  S+ L GK      +V+L KGIE  + K MSE+++E      + VLSGP+ A EV     TA V+ASED + CE +Q      TFR+Y + D  GVELGGALKN+ A+ AG++  LG G+NTK+ L+TR LAE+TR  V  G++P+TFLGLAGVGDLIVTC+S  SRN + G  +G+G SL++A+  +G V EGVNT K     +Q  GV MP+   +++I+FE +   + +  LM  + K
Sbjct:   83 REVSEKLKGKISKNAIVVNLAKGIETSSLKRMSEVIKEYLLNPVV-VLSGPSHAEEVVRQIPTACVLASEDVKACEFIQEAFMNETFRLYVNTDVIGVELGGALKNIIALGAGISDGLGFGDNTKAALMTRGLAEITRLGVAMGSDPLTFLGLAGVGDLIVTCTSNYSRNRRAGILIGKGKSLKEALKEIGMVVEGVNTTKSAYRLSQIYGVEMPITKEIYSIIFENKNPFEAVYNLMTRDKK 324          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_COREF (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Corynebacterium efficiens GN=gpsA PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.202e-51
Identity = 110/232 (47.41%), Postives = 145/232 (62.50%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEI--APRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDA-VTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            LVSL KGIE  T   MS+++ E+  A  +RI VLSGPNLARE+AE    ATVIA EDE   + VQA +    FR Y + D  G ELGGA KNV A+  G+A   G+GEN+ + LITR LAE+ R     GA+P TF GLAG+GDL+ TCSSP SRN   G  LG+G SLE A     G+VAEGV + + +   A  +GV MP+   ++A+  +G  + ++++ LM    K +
Sbjct:  108 LVSLAKGIEKDTHLRMSQVIAEVTGADPSRIAVLSGPNLAREIAEGQPAATVIACEDENRAKLVQAAVAAPYFRPYTNTDVIGTELGGACKNVIALACGIAHGFGLGENSNASLITRGLAEIARLGEAMGADPRTFAGLAGMGDLVATCSSPLSRNRTFGDRLGRGESLEQAREATHGQVAEGVISSQSIHDLAVGLGVEMPITQAVYAVCHQGMAVREMVDALMGRSKKAE 339          

HSP 2 Score: 30.4166 bits (67), Expect = 6.202e-51
Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = -2
Query:  722 NRETPRFPKGIKNLPPVEPSTDLLATLTECDLCFVGWPSSALRSVL 859
            +RE P +  GI     V  ++D  A L  C +  +G PS ALR+ L
Sbjct:   50 SRENPDYLPGITLPDSVIVTSDAQAALDGCSIVVLGIPSQALRTTL 95          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_MACCJ (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Macrococcus caseolyticus (strain JCSC5402) GN=gpsA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.168e-50
Identity = 105/230 (45.65%), Postives = 152/230 (66.09%), Query Frame = -3
Query:   13 KXLVSLTKGIEAHTFKLMSEIL-EEIAPRA--RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAE 693
            K  + ++KGIE  TFK +SE++ EE+ P     +GVLSGP+ A E+A    T   +AS+D+++ +  Q +     FR+Y + D  GVE+GGALKN+ A+ AG+   LG G+N K+ L+TR LAE+TR     GA+P+TFLGLAG+GDLIVTC+S  SRN++ G  LG+G SL++A+ ++G V EGV T +     AQ  GV MP+   L+ +LFEG  +N+ ++ LM  E
Sbjct:   99 KVFIHVSKGIEPTTFKRISEMITEEMDPEKFQGVGVLSGPSHAEELALKHPTTVAVASDDKQIRQIAQDIFMNSYFRIYTNDDLIGVEIGGALKNIIALAAGITDGLGYGDNAKAALMTRGLAEITRLGTKMGADPLTFLGLAGIGDLIVTCTSVHSRNWKCGNMLGKGASLDEALAQMGMVVEGVRTTQAANEMAQAFGVEMPITQSLYKLLFEGLDVNEGVKNLMNRE 328          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_MYCA1 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Mycobacterium avium (strain 104) GN=gpsA PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.796e-50
Identity = 103/226 (45.58%), Postives = 143/226 (63.27%), Query Frame = -3
Query:   10 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEP 687
            +VSL KG+E  T   MS+I+EE+ P    G+L+GPN+AREVAE    A V+A  D+ L  R+  +   R FRVY + D  G E+ GALKNV+AI  GM  +LG+GENT++++I RAL EMT+  V  G +P TF GLAG+GDLIVTC+S +SRN  VG  LG G  +++ +  + +VAEGV    V+   A E G+ MP+   + A++  G T+ Q    L+   P
Sbjct:  107 VVSLVKGLEQGTNMRMSQIVEEVLPGHPAGILAGPNIAREVAEGYAAAAVLAMPDQHLATRLSGLFRTRRFRVYTTDDVVGAEMAGALKNVFAIAVGMGYSLGIGENTRALVIARALREMTKLGVAMGGSPDTFPGLAGLGDLIVTCTSQRSRNRHVGEQLGAGKPIDEIIASMNQVAEGVKAASVIMEFANEFGLTMPIAREVDAVINHGSTVEQAYRGLIAEVP 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STRGG (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gpsA PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.570e-50
Identity = 104/231 (45.02%), Postives = 150/231 (64.94%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIA--PRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            LVSL KG+E  T +LMSE++ ++A  P  RI V+SGPNLA+E+AE    A V+A  DE + +R+QA  H   FR Y + D  G ELGGA+KNV  +  G+A  +G+G+NTK  LITR LAE TR  +  GA+P+TF GLAG+GDL+ TCSSP SRN+  G  LG+G++L++ +    + AEGV + + +   A+  GV MP+   + +I+ EG++    ++ LM    K +
Sbjct:  104 LVSLMKGVELGTAELMSEVIADVAKVPADRIAVVSGPNLAKEIAERRPAAAVVACADESVAQRLQAACHTSYFRPYTNTDVVGCELGGAVKNVIGLAVGIADGMGLGDNTKGSLITRGLAETTRLGLAMGADPLTFSGLAGLGDLVATCSSPLSRNHTFGTNLGRGMTLQETIAVTKQTAEGVKSCESVLDLARRHGVDMPITETVVSIVHEGKSPVVAVKELMSRSAKPE 334          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA2_MYCTU (Probable glycerol-3-phosphate dehydrogenase 2 [NAD(P)+] OS=Mycobacterium tuberculosis GN=gpsA2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.203e-49
Identity = 104/226 (46.02%), Postives = 142/226 (62.83%), Query Frame = -3
Query:   10 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEP 687
            +VSL KG+E  T   MS+I+EE+ P    G+L+GPN+AREVAE    A V+A  D+ L  R+ A+   R FRVY + D  GVE  GALKNV+AI  GM  +LG+GENT++++I RAL EMT+  V  G    TF GLAG+GDLIVTC+S +SRN  VG  LG G  +++ +  + +VAEGV    V+   A E G+ MP+   + A++  G T+ Q    L+   P
Sbjct:  107 VVSLVKGLEQGTNMRMSQIIEEVLPGHPAGILAGPNIAREVAEGYAAAAVLAMPDQHLATRLSAMFRTRRFRVYTTDDVVGVETAGALKNVFAIAVGMGYSLGIGENTRALVIARALREMTKLGVAMGGKSETFPGLAGLGDLIVTCTSQRSRNRHVGEQLGAGKPIDEIIASMSQVAEGVKAAGVVMEFANEFGLNMPIAREVDAVINHGSTVEQAYRGLIAEVP 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA2_MYCBO (Probable glycerol-3-phosphate dehydrogenase 2 [NAD(P)+] OS=Mycobacterium bovis GN=gpsA2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.203e-49
Identity = 104/226 (46.02%), Postives = 142/226 (62.83%), Query Frame = -3
Query:   10 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEP 687
            +VSL KG+E  T   MS+I+EE+ P    G+L+GPN+AREVAE    A V+A  D+ L  R+ A+   R FRVY + D  GVE  GALKNV+AI  GM  +LG+GENT++++I RAL EMT+  V  G    TF GLAG+GDLIVTC+S +SRN  VG  LG G  +++ +  + +VAEGV    V+   A E G+ MP+   + A++  G T+ Q    L+   P
Sbjct:  107 VVSLVKGLEQGTNMRMSQIIEEVLPGHPAGILAGPNIAREVAEGYAAAAVLAMPDQHLATRLSAMFRTRRFRVYTTDDVVGVETAGALKNVFAIAVGMGYSLGIGENTRALVIARALREMTKLGVAMGGKSETFPGLAGLGDLIVTCTSQRSRNRHVGEQLGAGKPIDEIIASMSQVAEGVKAAGVVMEFANEFGLNMPIAREVDAVINHGSTVEQAYRGLIAEVP 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_CHLL2 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gpsA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.757e-49
Identity = 107/237 (45.15%), Postives = 148/237 (62.45%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIG---VLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            + G+ +V++ KGIE  T K MSE+L E  P  RI     L GP+ A EV++   T  V +S   E   RVQ V H   FRVY + D  GVE+ G++KN+ AI AG++  +G G+N K+ +ITR LAEM+R AV+ G +P+T  GLAG+GDL+VTC S  SRN  VG  +G+G SL+D V  +  VAEGV T K +   ++  GV MP+   ++ +LFEG+ + Q I  LM  EPK +
Sbjct:   95 MQGRVIVNVAKGIELKTGKRMSEVLLEALPGVRISGVAALYGPSHAEEVSKEQPTTVVASSPSVETANRVQEVFHTSMFRVYTNTDIIGVEIAGSVKNIIAIAAGISDGIGYGDNAKAAIITRGLAEMSRLAVSLGGDPVTVSGLAGIGDLVVTCLSRHSRNRYVGEEIGRGRSLDDVVAHMNMVAEGVFTSKAVYDLSRTKGVEMPITQAVYEMLFEGKPVQQAILDLMTREPKKE 331          
The following BLAST results are available for this feature:
BLAST of EY720473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPDA_ACIB31.679e-6553.85Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ac... [more]
GPDA_PSYCK3.740e-6553.85Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ps... [more]
GPDA_THETN2.353e-5146.50Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Th... [more]
GPDA_COREF6.202e-5147.41Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Co... [more]
GPDA_MACCJ1.168e-5045.65Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ma... [more]
GPDA_MYCA15.796e-5045.58Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=My... [more]
GPDA_STRGG7.570e-5045.02Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA2_MYCTU2.203e-4946.02Probable glycerol-3-phosphate dehydrogenase 2 [NAD... [more]
GPDA2_MYCBO2.203e-4946.02Probable glycerol-3-phosphate dehydrogenase 2 [NAD... [more]
GPDA_CHLL23.757e-4945.15Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720473 ID=EY720473; Name=EY720473; organism=Citrus sinensis; type=EST; length=860bp
ATCGGTCTTCGGCTCGGCCCGCATCAGCAACTCGATGACCTGGTTCAAGG
TGCGCCCTTCAAACAGGATCGCGTGCAAACCCGCGACCAGCGGCATATAC
ACCCCGACTTCCTGAGCCTTGGCCTTCAGCACCTTCAGGGTGTTGACGCC
TTCGGCCACTTCGCCCAAACGCGTCACGGCGTCTTCCAGGCTCAGGCCCT
GGCCGAGGGCAAAACCGACCTGATAGTTGCGGCTTTTCGGTGACGAGCAG
GTGACGATCAGGTCGCCCACACCCGCCAGGCCAAGGAAGGTCATCGGGTT
GGCGCCCTGGTTGACCGCAAAGCGCGTCATCTCGGCCAAGGCACGGGTGA
TCAGCATGCTCTTGGTGTTTTCGCCCATGCCCAGCGCAACCGCCATGCCG
GCGATGATCGCGTAGACGTTTTTTAACGCCCCGCCCAGTTCGACGCCGAA
GCGGTCAGCACTGGCGTAAACGCGGAAGGTGCGACCGTGCAGCACTGCCT
GCACCCGCTCGCAGAGTTCTTCGTCTTCACTCGCGATCACGGTGGCGGTC
AGGGCGTGCTCAGCCACTTCCCGCGCCAGGTTCGGTCCGGACAACACGCC
AATGCGCGCTCGGGGGGCGATTTCTTCAAGGATTTCGCTCATCAACTTGA
AGGTGTGCGCCTCGATGCCCTTGGTCAGGCTGACCAGCANCTTGCCCGCC
AACCCGTCGGAGGTGAGGCGCGAGCACCGAACGCAAGGCACTGGATGGCC
AACCGACGAAACACAAGTCGCACTCGGTCAACGTCGCCAGCAAATCTGTC
GACGGCTCAACAGGGGGCAGATTCTTGATTCCTTTAGGGAACCGGGGGGT
TTCCCGGTTT
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