EY720473

Overview
NameEY720473
Unique NameEY720473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_THEPX (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Thermoanaerobacter sp. (strain X514) GN=gpsA PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.370e-49
Identity = 107/227 (47.14%), Postives = 148/227 (65.20%), Query Frame = -3
Query:    7 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPK 687
            +V+L KGIE  T K MSE+++E      + VLSGP+ A EV     TA V+AS + + CE VQ       FR+Y + D  GVELGG+LKN+ A+ AG++  LG G+NTK+ L+TR LAE+TR  V  G++P+TFLGLAGVGDLIVTC+S  SRN + G  +G+G SLE+A+  +G V EGVNT K     +Q   + MP+   +++ILFEG+   + +  LM  + K
Sbjct:   99 VVNLAKGIETSTLKRMSEVIKEYLSNDVV-VLSGPSHAEEVVRQIPTACVLASLNVKACEVVQDAFMDENFRLYINKDVVGVELGGSLKNIIALGAGISDGLGFGDNTKAALMTRGLAEITRLGVALGSDPLTFLGLAGVGDLIVTCTSMLSRNRRAGILIGKGKSLEEALKEIGMVVEGVNTTKSAYRLSQIHKIEMPITKEIYSILFEGKNPYEAVYSLMTRDKK 324          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_THEP3 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gpsA PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.370e-49
Identity = 107/227 (47.14%), Postives = 148/227 (65.20%), Query Frame = -3
Query:    7 LVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPK 687
            +V+L KGIE  T K MSE+++E      + VLSGP+ A EV     TA V+AS + + CE VQ       FR+Y + D  GVELGG+LKN+ A+ AG++  LG G+NTK+ L+TR LAE+TR  V  G++P+TFLGLAGVGDLIVTC+S  SRN + G  +G+G SLE+A+  +G V EGVNT K     +Q   + MP+   +++ILFEG+   + +  LM  + K
Sbjct:   99 VVNLAKGIETSTLKRMSEVIKEYLSNDVV-VLSGPSHAEEVVRQIPTACVLASLNVKACEIVQDAFMDENFRLYINKDVVGVELGGSLKNIIALGAGISDGLGFGDNTKAALMTRGLAEITRLGVALGSDPLTFLGLAGVGDLIVTCTSMLSRNRRAGILIGKGKSLEEALKEIGMVVEGVNTTKSAYRLSQINKIEMPITKEIYSILFEGKNPYEAVYSLMTRDKK 324          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_SYNY3 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Synechocystis sp. (strain PCC 6803) GN=gpsA PE=3 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.093e-48
Identity = 109/247 (44.13%), Postives = 143/247 (57.89%), Query Frame = -3
Query:    1 VPCVRCSRLTSDGLAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 741
            VP V       D      LV+ TKG++  T    S+I +   P   I VLSGPNL++E+ +    ATV+AS D+   E +Q +     FRVY + D  G ELGG LKNV AI  G+   LG+G N KS LITRAL E+TR  ++ GA P TF GLAG+GDL+ TCSS  SRNY+VG+ L +G SLE+ +  LG  AEGVNT  VL   A    + +P+   ++ +L    T  Q +E LM  E K +
Sbjct:   65 VPSVAARLEAMDLQRRTILVTATKGLDPETMTTPSQIWQAALPSQPIAVLSGPNLSKEIDQGLPAATVVASSDQAAAEEIQTIFAADNFRVYTNNDPLGTELGGTLKNVMAIAVGVCEGLGLGTNAKSALITRALPEITRVGLHFGAQPDTFWGLAGLGDLLATCSSMLSRNYRVGYGLSKGQSLEEILANLGGTAEGVNTTDVLIKIANREKIAVPITRQVYRLLHGKITPPQAVEALMERELKAE 311          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_METPP (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Methylibium petroleiphilum (strain PM1) GN=gpsA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.093e-48
Identity = 109/233 (46.78%), Postives = 144/233 (61.80%), Query Frame = -3
Query:    1 AGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 699
            +G  L  L KG EA T  L  E+  E+AP AR+GVLSGP+ A EVA    TA V AS DE L  +     H  + RVY SAD  GVE+GGA+KNV AI  G+A  +G+G N ++ L+TR LAE+TR     GA   TF+GL+G+GDL++T +   SRN QVG  L QG SL + +  LG VAEGV +   + A+AQ +GV MP+ A + A+L    T  Q +E LMR + + +
Sbjct:   96 SGAGLWWLCKGFEAGTGALGHEVAREVAPAARVGVLSGPSFALEVARGQPTALVAASTDEALRNQAVEAFHSESLRVYTSADPVGVEVGGAVKNVIAIATGIADGMGLGLNARAALVTRGLAEITRLGTALGARVDTFMGLSGLGDLVLTATGDLSRNRQVGLQLAQGRSLPEVLAALGHVAEGVYSAATVLARAQALGVDMPITAAVVAVLDGRLTPAQALERLMRRQARAE 328          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_CHLPB (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Chlorobium phaeobacteroides (strain BS1) GN=gpsA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.093e-48
Identity = 102/237 (43.04%), Postives = 151/237 (63.71%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPR---ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            L+   +V++ KGIE  T K +SE++ E+ P    A++ VL GP+ A EV++   T  V AS   E  E+VQ   H   FRVY + D  GVE+ G++KN+ AI AG++  +G G+N K+ +ITR LAEM+R AV+ G  PMT  GL+G+GDL+VTC S  SRN  +G  +G+G SLE+ ++ +  VAEGV+T K + + +  +GV MP+ + ++ +LFE +   Q I  LM  EPK +
Sbjct:   95 LSDTIIVNVAKGIELDTGKRLSEVIPEVLPAVSPAQVAVLYGPSHAEEVSDKQPTTVVAASSCLETAEKVQEAFHTSMFRVYVNTDIIGVEIAGSVKNIIAIAAGISDGIGYGDNAKAAIITRGLAEMSRLAVSLGGEPMTVSGLSGIGDLVVTCLSRHSRNRYLGEQIGKGRSLEEVISHMNMVAEGVSTTKAVFSLSSRLGVDMPITSAVYEMLFENKPAEQAILDLMTREPKKE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_CHLTE (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Chlorobium tepidum GN=gpsA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.428e-48
Identity = 105/237 (44.30%), Postives = 146/237 (61.60%), Query Frame = -3
Query:    1 LAGKXLVSLTKGIEAHTFKLMSEILEEIAPRA---RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 702
            L GK +V++ KGIE HT K MSE+L E  PR    +I VL GP+ A EVA    T  V  S  E    RVQ   H  +FRVY + D  GVE+ G++KNV AI AG++  LG G+N K+ +ITR LAE++R +   GA+P+T  GL+G+GDL+VTC S  SRN  VG  +G+G  L++ +  +  VAEGV T K +   A+ +GV MP+   ++ +L+E +   Q I  LM  +PK +
Sbjct:   95 LDGKIIVNVAKGIEQHTGKRMSEVLLEALPRIAPEQIAVLYGPSHAEEVARQQPTTVVACSVSEATARRVQEAFHTSSFRVYVNTDLIGVEIAGSVKNVIAIAAGISDGLGFGDNAKAAIITRGLAEISRLSSKLGADPLTLSGLSGIGDLVVTCLSQHSRNRYVGEQIGKGRKLDEVIGEMSMVAEGVLTSKAVVKLAERLGVEMPISQAVYEMLYENKPAPQAILELMERDPKPE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_MYXXD (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Myxococcus xanthus (strain DK 1622) GN=gpsA PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.620e-48
Identity = 102/232 (43.97%), Postives = 143/232 (61.64%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPRA---RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +V+++KGIE  T   M+E+LE+  P      + VLSGP+ A+E+A    T   IAS  +++  R Q  L   TFR Y S D  GV+ GGALKNV AI AGMA  LGMG N ++ +ITR LAE+TR AV +GANP+T  GL+G+GDL++TC+   SRN  VG  LG+G  L D +  + EVAEGV T +       + GV +P+   ++ I  EG++    +  LM  +PK++
Sbjct:  100 IVTVSKGIENGTLLTMTELLEDCLPEEFHPYLAVLSGPSFAKELARRMPTVVTIASHWDKVALRCQKALQTETFRSYTSTDVVGVQYGGALKNVIAIAAGMADGLGMGHNARAAIITRGLAEITRLAVRKGANPLTLSGLSGMGDLVLTCTGELSRNRHVGMELGKGRKLPDILADMKEVAEGVKTARSAHELELKTGVELPICHQVYLIAHEGKSARTAVVDLMTRQPKSE 331          

HSP 2 Score: 27.335 bits (59), Expect = 1.620e-48
Identity = 16/45 (35.56%), Postives = 21/45 (46.67%), Query Frame = -2
Query:  719 ETPRFPKGIKNLPPVEPSTDLLATLTECDLCFVGWPSSALRSVLA 853
            E P + KGI     V  + DL   L   +L  +  PS A R V+A
Sbjct:   44 ENPTYLKGIPISERVRATNDLQEALVGSELVVLATPSHATREVVA 88          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ANADE (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=gpsA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.865e-48
Identity = 100/236 (42.37%), Postives = 146/236 (61.86%), Query Frame = -3
Query:    1 AGKXLVSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 699
            AG  +V + KGIE  T   M+E++E++ P      + VLSGP+ A+EVA+   TA  +A+  E + ++VQ   H +TFR Y S D  G E+GG +KNV AI AG++  +G G N  + L+TR LAE+TR AV +GANP+T  GLAG+GDL++TCSS  SRN  VG  L +G + +     LG+VAEGV   +  +  A+ +GV MP+   ++ +L+EG    + +  LM  E K +
Sbjct:   96 AGTPIVCVAKGIELDTLMTMTEVVEDVLPVPLHPYLAVLSGPSFAKEVAKGLPTAVTVAARWERIAKQVQDAFHTKTFRPYTSGDVVGCEIGGCVKNVVAIAAGISDGMGFGANAMAALVTRGLAEITRLAVRKGANPLTLSGLAGLGDLVLTCSSDLSRNRTVGRGLAEGKTADAIQRELGQVAEGVRNARSARELAKRLGVEMPITEAIYRVLYEGLAPREAVTALMMRETKPE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_ANAD2 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gpsA PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.181e-48
Identity = 100/236 (42.37%), Postives = 145/236 (61.44%), Query Frame = -3
Query:    1 AGKXLVSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 699
            AG  +V + KGIE  T   M+E++E++ P      + VLSGP+ A+EVA+   TA  +A+  E + ++VQ   H +TFR Y S D  G E+GG +KNV AI AG++  +G G N  + L+TR LAE+TR AV +GANP+T  GLAG+GDL++TCSS  SRN  VG  L  G + +     LG+VAEGV   +  +  A+ +GV MP+   ++ +L+EG    + +  LM  E K +
Sbjct:   96 AGTPIVCVAKGIELDTLMTMTEVIEDVLPVPLHPYLAVLSGPSFAKEVAKGLPTAVTVAARWERIAKQVQDAFHTKTFRPYTSGDVVGCEIGGCVKNVVAIAAGISDGMGFGANAMAALVTRGLAEITRLAVRKGANPLTLSGLAGLGDLVLTCSSDLSRNRTVGRGLAAGKTADAIQRELGQVAEGVRNARSARELAKRLGVEMPITEAIYRVLYEGLAPREAVTALMMRETKPE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_DESHY (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Desulfitobacterium hafniense (strain Y51) GN=gpsA PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.086e-48
Identity = 100/225 (44.44%), Postives = 139/225 (61.78%), Query Frame = -3
Query:   22 GKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLM 696
            G  +V+  KG+E  + K +S++L E  P   I VLSGP+ A EV +   T  V+AS++ +  E VQ +L    FRVY + D  GVELGGA KN+ A+ AG A  LG G+NTK+ L+TR +AE+TR     G NP+TF GLAGVGDLIVTC+S  SRN++ G ALG+G  LE  +  +G V EGV T +V    +++  + MP+    + +LF+G      +  LM
Sbjct:   97 GTIVVNTAKGLEEGSHKRLSQVLTEELPHHPIVVLSGPSHAEEVGKDMPTTVVVASQNSQAAEAVQDMLMTPKFRVYTNPDTIGVELGGAFKNIIALCAGFADGLGFGDNTKAALMTRGIAEITRLGAAMGGNPLTFAGLAGVGDLIVTCTSRHSRNHRAGVALGEGKPLEQVLKEVGMVVEGVRTTRVAYELSRQYEISMPITEQAYQVLFQGADPRAAVSALM 321          
The following BLAST results are available for this feature:
BLAST of EY720473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPDA_THEPX8.370e-4947.14Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Th... [more]
GPDA_THEP38.370e-4947.14Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Th... [more]
GPDA_SYNY31.093e-4844.13Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Sy... [more]
GPDA_METPP1.093e-4846.78Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Me... [more]
GPDA_CHLPB1.093e-4843.04Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ch... [more]
GPDA_CHLTE1.428e-4844.30Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ch... [more]
GPDA_MYXXD1.620e-4843.97Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=My... [more]
GPDA_ANADE1.865e-4842.37Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=An... [more]
GPDA_ANAD23.181e-4842.37Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=An... [more]
GPDA_DESHY7.086e-4844.44Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=De... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720473 ID=EY720473; Name=EY720473; organism=Citrus sinensis; type=EST; length=860bp
ATCGGTCTTCGGCTCGGCCCGCATCAGCAACTCGATGACCTGGTTCAAGG
TGCGCCCTTCAAACAGGATCGCGTGCAAACCCGCGACCAGCGGCATATAC
ACCCCGACTTCCTGAGCCTTGGCCTTCAGCACCTTCAGGGTGTTGACGCC
TTCGGCCACTTCGCCCAAACGCGTCACGGCGTCTTCCAGGCTCAGGCCCT
GGCCGAGGGCAAAACCGACCTGATAGTTGCGGCTTTTCGGTGACGAGCAG
GTGACGATCAGGTCGCCCACACCCGCCAGGCCAAGGAAGGTCATCGGGTT
GGCGCCCTGGTTGACCGCAAAGCGCGTCATCTCGGCCAAGGCACGGGTGA
TCAGCATGCTCTTGGTGTTTTCGCCCATGCCCAGCGCAACCGCCATGCCG
GCGATGATCGCGTAGACGTTTTTTAACGCCCCGCCCAGTTCGACGCCGAA
GCGGTCAGCACTGGCGTAAACGCGGAAGGTGCGACCGTGCAGCACTGCCT
GCACCCGCTCGCAGAGTTCTTCGTCTTCACTCGCGATCACGGTGGCGGTC
AGGGCGTGCTCAGCCACTTCCCGCGCCAGGTTCGGTCCGGACAACACGCC
AATGCGCGCTCGGGGGGCGATTTCTTCAAGGATTTCGCTCATCAACTTGA
AGGTGTGCGCCTCGATGCCCTTGGTCAGGCTGACCAGCANCTTGCCCGCC
AACCCGTCGGAGGTGAGGCGCGAGCACCGAACGCAAGGCACTGGATGGCC
AACCGACGAAACACAAGTCGCACTCGGTCAACGTCGCCAGCAAATCTGTC
GACGGCTCAACAGGGGGCAGATTCTTGATTCCTTTAGGGAACCGGGGGGT
TTCCCGGTTT
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