EY720473

Overview
NameEY720473
Unique NameEY720473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA1_LACDA (Glycerol-3-phosphate dehydrogenase [NAD(P)+] 1 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=gpsA1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.986e-47
Identity = 97/225 (43.11%), Postives = 142/225 (63.11%), Query Frame = -3
Query:   22 LVSLTKGIEAHTFKLMSEIL-EEIAPRA--RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLM 687
            LVS TKGIE+ T KL+ +I  +EI P    ++ VLSGP+ A   A+  LTA  +AS   +   ++Q +      R Y S D  GV++GGA+KNV AI AG+   LG G+N K+ L+TR LAE+TR  V  G  P TF GL+G+GDLIVTC+S  SRN++ G+ LGQG  L++ +  +G+V EG  T+K +     +  + MP+ A ++ +L+EG  ++  I+L+M
Sbjct:  104 LVSATKGIESGTKKLVLQIFKDEIYPDGFDKMIVLSGPSHAENTAQKDLTAITLASTSLDNAAKMQKIFSNDYVRFYTSNDPIGVQVGGAVKNVIAIAAGILAGLGYGDNAKAALMTRGLAEITRLGVAFGGQPWTFSGLSGIGDLIVTCTSVNSRNWRCGYQLGQGKPLDEVLANMGQVVEGATTVKAVYEICDKYSLDMPISASIYKVLYEGAKIDDEIKLMM 328          

HSP 2 Score: 31.9574 bits (71), Expect = 2.986e-47
Identity = 19/47 (40.43%), Postives = 27/47 (57.45%), Query Frame = -2
Query:  677 PPVEPSTDLLATLTECDLCFVGWPSSALRSVLAPHLRRVGGQXAGQP 817
            P V  STD+   L +CD+     P+SA+RSV A  +R+V  +   QP
Sbjct:   57 PSVWASTDMGQVLKDCDVILFAVPTSAIRSV-AKAVRQVLDENGRQP 102          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA1_RHOSR (Glycerol-3-phosphate dehydrogenase [NAD(P)+] 1 OS=Rhodococcus sp. (strain RHA1) GN=gpsA1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.517e-47
Identity = 98/232 (42.24%), Postives = 148/232 (63.79%), Query Frame = -3
Query:   64 VGHPVPCVRCS--RLTSDGLAGKXLVSLTKGIEAHTFKLMSEILEEIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAIL 753
            VG P   VR +  ++ ++  A   ++SL KG+E  T    +E++ E  P   +G+L+GPN+ARE+ +    A+V+A++D  +   +Q +     FRVY + D  G ELGG LKN+ AI +GMA  L +G+NT++M++ R LAEMTR     GANP TF GL GVGDLI TC SP SRN +VG  + +G+++++AV +LG+VAEGV T   +   A++  V MP+ A + A++
Sbjct:   79 VGVPSHAVRSTLAQIANEVRAWVPVLSLAKGLEPGTRLRPTEVIAECLPGHPVGLLAGPNIAREIVDGLAAASVVATQDVRVATALQPLFASAVFRVYRNTDVLGCELGGVLKNIVAIASGMADGLDVGDNTRAMVLARGLAEMTRLGEAMGANPRTFAGLTGVGDLIATCMSPSSRNRRVGEYIARGMTVDEAVAKLGQVAEGVKTAPTVMELARDYNVEMPIAAEVEAVV 310          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAES (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gpsA PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.593e-47
Identity = 101/234 (43.16%), Postives = 144/234 (61.54%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEEIAPRAR---IGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+         IGVLSGP+ A EV     T    +S+D  + + +Q +      RVY + D  GVELGGALKN+ AI +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRNY +GF LGQG + E+A+  +  V EG+ T K +   AQ+ GV MP+   L+ +LFE   +++ +  LM  + K +
Sbjct:   99 KTFIHVAKGIENDTFKRVSEMIEDSISSEHNGGIGVLSGPSHAEEVVIKQPTTVAASSKDNNVSKLIQDLFMNDYLRVYTNNDLVGVELGGALKNIIAIASGIVAGMGWGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNYTLGFKLGQGKTAEEALKEMKMVVEGIYTTKSVYHLAQQEGVEMPITNALYEVLFEDVPVSKSVRTLMERDKKAE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAEQ (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gpsA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.593e-47
Identity = 101/234 (43.16%), Postives = 144/234 (61.54%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEEIAPRAR---IGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+         IGVLSGP+ A EV     T    +S+D  + + +Q +      RVY + D  GVELGGALKN+ AI +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRNY +GF LGQG + E+A+  +  V EG+ T K +   AQ+ GV MP+   L+ +LFE   +++ +  LM  + K +
Sbjct:   99 KTFIHVAKGIENDTFKRVSEMIEDSISSEHNGGIGVLSGPSHAEEVVIKQPTTVAASSKDNNVSKLIQDLFMNDYLRVYTNNDLVGVELGGALKNIIAIASGIVAGMGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNYTLGFKLGQGKTAEEALKEMKMVVEGIYTTKSVYHLAQQEGVEMPITNALYEVLFEDVPVSKSVRTLMERDKKAE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAAW (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain MW2) GN=gpsA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.998e-47
Identity = 100/234 (42.74%), Postives = 150/234 (64.10%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAAT (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gpsA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.998e-47
Identity = 100/234 (42.74%), Postives = 150/234 (64.10%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAAS (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain MSSA476) GN=gpsA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.998e-47
Identity = 100/234 (42.74%), Postives = 150/234 (64.10%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAAE (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain Newman) GN=gpsA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.998e-47
Identity = 100/234 (42.74%), Postives = 150/234 (64.10%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAAC (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain COL) GN=gpsA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.998e-47
Identity = 100/234 (42.74%), Postives = 150/234 (64.10%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAAB (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gpsA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.998e-47
Identity = 100/234 (42.74%), Postives = 150/234 (64.10%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKNVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
The following BLAST results are available for this feature:
BLAST of EY720473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPDA1_LACDA2.986e-4743.11Glycerol-3-phosphate dehydrogenase [NAD(P)+] 1 OS=... [more]
GPDA1_RHOSR3.517e-4742.24Glycerol-3-phosphate dehydrogenase [NAD(P)+] 1 OS=... [more]
GPDA_STAES4.593e-4743.16Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAEQ4.593e-4743.16Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAAW5.998e-4742.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAAT5.998e-4742.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAAS5.998e-4742.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAAE5.998e-4742.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAAC5.998e-4742.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAAB5.998e-4742.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720473 ID=EY720473; Name=EY720473; organism=Citrus sinensis; type=EST; length=860bp
ATCGGTCTTCGGCTCGGCCCGCATCAGCAACTCGATGACCTGGTTCAAGG
TGCGCCCTTCAAACAGGATCGCGTGCAAACCCGCGACCAGCGGCATATAC
ACCCCGACTTCCTGAGCCTTGGCCTTCAGCACCTTCAGGGTGTTGACGCC
TTCGGCCACTTCGCCCAAACGCGTCACGGCGTCTTCCAGGCTCAGGCCCT
GGCCGAGGGCAAAACCGACCTGATAGTTGCGGCTTTTCGGTGACGAGCAG
GTGACGATCAGGTCGCCCACACCCGCCAGGCCAAGGAAGGTCATCGGGTT
GGCGCCCTGGTTGACCGCAAAGCGCGTCATCTCGGCCAAGGCACGGGTGA
TCAGCATGCTCTTGGTGTTTTCGCCCATGCCCAGCGCAACCGCCATGCCG
GCGATGATCGCGTAGACGTTTTTTAACGCCCCGCCCAGTTCGACGCCGAA
GCGGTCAGCACTGGCGTAAACGCGGAAGGTGCGACCGTGCAGCACTGCCT
GCACCCGCTCGCAGAGTTCTTCGTCTTCACTCGCGATCACGGTGGCGGTC
AGGGCGTGCTCAGCCACTTCCCGCGCCAGGTTCGGTCCGGACAACACGCC
AATGCGCGCTCGGGGGGCGATTTCTTCAAGGATTTCGCTCATCAACTTGA
AGGTGTGCGCCTCGATGCCCTTGGTCAGGCTGACCAGCANCTTGCCCGCC
AACCCGTCGGAGGTGAGGCGCGAGCACCGAACGCAAGGCACTGGATGGCC
AACCGACGAAACACAAGTCGCACTCGGTCAACGTCGCCAGCAAATCTGTC
GACGGCTCAACAGGGGGCAGATTCTTGATTCCTTTAGGGAACCGGGGGGT
TTCCCGGTTT
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