EY720473

Overview
NameEY720473
Unique NameEY720473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAA9 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain JH9) GN=gpsA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.336e-46
Identity = 100/234 (42.74%), Postives = 149/234 (63.68%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCISTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAA2 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain JH1) GN=gpsA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.336e-46
Identity = 100/234 (42.74%), Postives = 149/234 (63.68%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCISTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAA1 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gpsA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.336e-46
Identity = 100/234 (42.74%), Postives = 149/234 (63.68%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEE-IAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+ I+P   A IGVLSGP+ A EV     T    +S+D+ + +  Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC S  SRN+ +G+ LGQG S++ A++ +  V EG+ T K +   A+E  V MP+   L+ +LFE  ++ + ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCISTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_LEPBP (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gpsA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.336e-46
Identity = 101/232 (43.53%), Postives = 148/232 (63.79%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +VS +KGIE  + +L+SEI E   P    +++  LSGP+ A+E+ +   T   IAS++E   +RVQ +     FR Y + D  GVE+GGALKNV AI AG+A  LG G+NT++ LITR L E+TR  +  GA+PMTFLG +G+GDL++TC    SRN  VGF LG+G SL++ ++ + EVAEGV T    K  A ++GV M +   ++ +L+E +   +V+  LM  + K +
Sbjct:  100 IVSASKGIENESLRLVSEIFESELPGQFHSQLSYLSGPSFAKEMVKRVPTIVSIASKNEATAKRVQEIFSFTYFRTYWTPDVVGVEVGGALKNVIAIAAGVADGLGFGQNTRAALITRGLNEITRMGIKMGADPMTFLGPSGMGDLVLTCCGEASRNRTVGFRLGKGESLKEILSSMNEVAEGVKTTLSTKNLADKLGVEMAITQEVYHMLYEDKDPKEVVRALMSRDLKRE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_LEPBA (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gpsA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.336e-46
Identity = 101/232 (43.53%), Postives = 148/232 (63.79%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +VS +KGIE  + +L+SEI E   P    +++  LSGP+ A+E+ +   T   IAS++E   +RVQ +     FR Y + D  GVE+GGALKNV AI AG+A  LG G+NT++ LITR L E+TR  +  GA+PMTFLG +G+GDL++TC    SRN  VGF LG+G SL++ ++ + EVAEGV T    K  A ++GV M +   ++ +L+E +   +V+  LM  + K +
Sbjct:  100 IVSASKGIENESLRLVSEIFESELPGQFHSQLSYLSGPSFAKEMVKRVPTIVSIASKNEATAKRVQEIFSFTYFRTYWTPDVVGVEVGGALKNVIAIAAGVADGLGFGQNTRAALITRGLNEITRMGIKMGADPMTFLGPSGMGDLVLTCCGEASRNRTVGFRLGKGESLKEILSSMNEVAEGVKTTLSTKNLADKLGVEMAITQEVYHMLYEDKDPKEVVRALMSRDLKRE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_CORA7 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=gpsA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.336e-46
Identity = 107/232 (46.12%), Postives = 140/232 (60.34%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPRA--RIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRL-GEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            LVS++KG+E  T  LMSE++ + A  +  RI VLSGPNLA+EVA+    ATVIA  D    E VQ       FR Y + D  G E+GGA KNV A+  GMA   G+G NT + +ITR LAE+TR  V  GA+P TF GLAG+GDL+ TCSS  SRN   G+ LGQG +LE+A     G+VAEGV +   +   AQ   V MP+   ++ +   G T++ +I  LM    K +
Sbjct:  101 LVSISKGVEKATLNLMSEVIADAAGVSSDRIAVLSGPNLAKEVAQEQPAATVIACSDAARAEAVQHAAAAPYFRPYTNTDVIGAEIGGACKNVIALACGMAAGKGLGNNTMATIITRGLAEITRLGVKLGADPFTFSGLAGMGDLVATCSSTLSRNRTFGYRLGQGGTLEEATAATNGQVAEGVISSDSIFRLAQRADVEMPITQAVYGVCHRGVTVDDMIVALMGRTKKAE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_PELLD (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Pelodictyon luteolum (strain DSM 273) GN=gpsA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.745e-46
Identity = 100/235 (42.55%), Postives = 145/235 (61.70%), Query Frame = -3
Query:    1 GKXLVSLTKGIEAHTFKLMSEILEEIAPR---ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 696
            GK +V++ KGIE  +   M+E+L +  P     R+  L GP+ A EVA    T  V +S   E  E VQ V H   FRVY + D  GVE+ G++KN+ AI AG++  +G G+N K+ +ITR +AE++R A+  G +PMT  GL+G+GDL+VTC S  SRN  VG  LG+G SL+D +T +  +AEGV + K + A +  +GV MP+   ++ +LFE + + Q I  LM  EPK +
Sbjct:   97 GKIIVNVAKGIEVGSGMRMTEVLMDELPGLQPGRVAALYGPSHAEEVAREQPTTVVASSPSMETAEAVQEVFHTSRFRVYVNTDIVGVEVAGSVKNIIAIAAGISDGIGFGDNAKAAIITRGMAEISRLALKLGGDPMTISGLSGIGDLVVTCLSRHSRNRFVGEELGRGRSLDDIITHMNMIAEGVLSSKAVYALSSSLGVEMPITQAVYEMLFEAKPVEQAILDLMTREPKPE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_GEOSM (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Geobacter sp. (strain M21) GN=gpsA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.977e-46
Identity = 103/227 (45.37%), Postives = 143/227 (63.00%), Query Frame = -3
Query:   19 LVSLTKGIEAHTFKLMSEILEEIAPRAR---IGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQ-VIELLMR 687
            +VS +KGIE  T   +SEI +EI P  +   +  LSGP+ AREVA    TA   A+  E +  RVQ       FRVY ++D  GVELGGA+KNV AI AG++  LG G NT++ LITR LAEMTR  V  GA P TF GLAG+GDL++TC+   SRN  VG  +GQG +L + +  +  VAEGV T +     A+++GV MP++  ++ +L++ +   + V+EL+ R
Sbjct:  102 IVSASKGIEVDTLATVSEIYQEILPPEQYRNLAALSGPSFAREVALEMPTAVTAAASTEAVARRVQEAFTTSYFRVYRNSDVVGVELGGAIKNVIAIAAGISDGLGFGSNTRAALITRGLAEMTRLGVAMGAQPSTFAGLAGMGDLVLTCTGDLSRNRSVGIQIGQGRTLSEILGEMRMVAEGVKTTESAYNLAKKLGVEMPIIEQMYQMLYQSKPAREAVLELMTR 328          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_CORDI (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Corynebacterium diphtheriae GN=gpsA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.977e-46
Identity = 106/245 (43.27%), Postives = 148/245 (60.41%), Query Frame = -3
Query:    1 CSRLTSDGLAGKXLVSLTKGIEAHTFKLMSEILEEI--APRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDA-VTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 726
            C+ +  D L    L+SL KGIE  TF  MSE++ E+  A   ++ VLSGPNLARE+AE    ATVIA  +E+  +R+Q  L    FR Y + D  G E+GGA KNV A+  GMA   G+GENT + L+TR LAE++R  V  GA+P T  GLAG+GDL+ TCSSP SRN   G  LG+G +L++A     G+VAEGV + + +   A  +GV MP+   +  +    + +  ++  LM    K++
Sbjct:   91 CADIPQDAL----LLSLAKGIEKETFLRMSEVIAEVTGAQPDKVAVLSGPNLAREIAEEQPAATVIACTNEKNAQRIQHALAAPYFRPYTNTDVIGCEIGGACKNVIALACGMASGRGLGENTLATLMTRGLAEISRLGVAMGADPRTLSGLAGLGDLVATCSSPLSRNRTFGARLGEGKTLDEARAATNGQVAEGVISSQSIARLADSLGVDMPITRAVFGVCHRDQNVADMVAALMGRTKKSE 331          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_THEFY (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Thermobifida fusca (strain YX) GN=gpsA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.240e-46
Identity = 99/216 (45.83%), Postives = 133/216 (61.57%), Query Frame = -3
Query:   55 GKXLVSLTKGIEAHTFKLMSEILEEIA--PRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEG 696
            G  +VSL KGIE  T   MSE++ E+   P  RI VLSGPNLARE+AE      V+A  DE+   R+Q +     FR Y + D  GVELGGA+KNV A+  G+AV +G G+N K+ LITR LAE  R AV  GA+  T  GLAG+GDL+ TCSSP SRN   G  LG G+++++ +    + AEGV +   +   A+  GV MP+   + A+++ G
Sbjct:   99 GTVVVSLMKGIEVGTCLRMSEVIAEVLELPDHRIAVLSGPNLAREIAERQPATAVVACTDEQTAVRLQHLCKSPYFRPYTNTDVIGVELGGAVKNVIALAVGVAVGMGFGDNAKAALITRGLAETVRLAVALGADEHTLAGLAGLGDLVATCSSPLSRNRTFGEKLGSGMTVDEVIAETKQTAEGVKSSTSILELARAHGVEMPITEAVVAMMYHG 314          

HSP 2 Score: 25.409 bits (54), Expect = 3.240e-46
Identity = 13/45 (28.89%), Postives = 21/45 (46.67%), Query Frame = -2
Query:  719 ETPRFPKGIKNLPPVEPSTDLLATLTECDLCFVGWPSSALRSVLA 853
            E P +  GI   P +  +TD+   +   D   +  P+  LR+ LA
Sbjct:   46 ENPDYLPGITLNPRLTATTDVAEAMAGADFTVIAVPAQTLRTNLA 90          
The following BLAST results are available for this feature:
BLAST of EY720473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPDA_STAA91.336e-4642.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAA21.336e-4642.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_STAA11.336e-4642.74Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_LEPBP1.336e-4643.53Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Le... [more]
GPDA_LEPBA1.336e-4643.53Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Le... [more]
GPDA_CORA71.336e-4646.12Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Co... [more]
GPDA_PELLD1.745e-4642.55Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Pe... [more]
GPDA_GEOSM2.977e-4645.37Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ge... [more]
GPDA_CORDI2.977e-4643.27Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Co... [more]
GPDA_THEFY3.240e-4645.83Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Th... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720473 ID=EY720473; Name=EY720473; organism=Citrus sinensis; type=EST; length=860bp
ATCGGTCTTCGGCTCGGCCCGCATCAGCAACTCGATGACCTGGTTCAAGG
TGCGCCCTTCAAACAGGATCGCGTGCAAACCCGCGACCAGCGGCATATAC
ACCCCGACTTCCTGAGCCTTGGCCTTCAGCACCTTCAGGGTGTTGACGCC
TTCGGCCACTTCGCCCAAACGCGTCACGGCGTCTTCCAGGCTCAGGCCCT
GGCCGAGGGCAAAACCGACCTGATAGTTGCGGCTTTTCGGTGACGAGCAG
GTGACGATCAGGTCGCCCACACCCGCCAGGCCAAGGAAGGTCATCGGGTT
GGCGCCCTGGTTGACCGCAAAGCGCGTCATCTCGGCCAAGGCACGGGTGA
TCAGCATGCTCTTGGTGTTTTCGCCCATGCCCAGCGCAACCGCCATGCCG
GCGATGATCGCGTAGACGTTTTTTAACGCCCCGCCCAGTTCGACGCCGAA
GCGGTCAGCACTGGCGTAAACGCGGAAGGTGCGACCGTGCAGCACTGCCT
GCACCCGCTCGCAGAGTTCTTCGTCTTCACTCGCGATCACGGTGGCGGTC
AGGGCGTGCTCAGCCACTTCCCGCGCCAGGTTCGGTCCGGACAACACGCC
AATGCGCGCTCGGGGGGCGATTTCTTCAAGGATTTCGCTCATCAACTTGA
AGGTGTGCGCCTCGATGCCCTTGGTCAGGCTGACCAGCANCTTGCCCGCC
AACCCGTCGGAGGTGAGGCGCGAGCACCGAACGCAAGGCACTGGATGGCC
AACCGACGAAACACAAGTCGCACTCGGTCAACGTCGCCAGCAAATCTGTC
GACGGCTCAACAGGGGGCAGATTCTTGATTCCTTTAGGGAACCGGGGGGT
TTCCCGGTTT
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