EY720473

Overview
NameEY720473
Unique NameEY720473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_OCEIH (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Oceanobacillus iheyensis GN=gpsA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.888e-46
Identity = 108/245 (44.08%), Postives = 149/245 (60.82%), Query Frame = -3
Query:   22 PVPCVR--CSRLTSDGLAGKXLVSLTKGIEAHTFKLMSEILEEIAP--RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLM 744
            P   +R  CS L     +   ++  TKGIE  + K +SE++EE        I VLSGP+ A EVA    T    +S + E  +  Q +    +FRVY S D  G+ELGGALKN+ A+ AG++  LG G+N K+ LITR LAE+ R   + GANP++FLGL+GVGDLIVTC+S  SRN++ G  LG+G  LED + ++G V EGV T+K     A++  V MP+ +G+  ILFE +    V+E LM
Sbjct:   79 PTKAIREVCSELNKWMDSKTTVIHATKGIEPVSLKRVSEMIEEEMDIKYEDIVVLSGPSHAEEVALRHPTTVTTSSINLEKAKHAQDLFSSDSFRVYTSDDILGIELGGALKNIIALGAGISDGLGFGDNAKAALITRGLAEIARLGTSLGANPLSFLGLSGVGDLIVTCTSVHSRNWRAGNLLGKGNQLEDVLEQMGMVVEGVRTVKAAHQFAKDQNVDMPITSGIFQILFENKNPKDVVEQLM 323          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_GEOTN (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gpsA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.888e-46
Identity = 105/232 (45.26%), Postives = 148/232 (63.79%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEIL-EEIAPRAR-IGVLSGPNLAREVAEHALTATVIASEDEELCERVQAV-LHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +V+++KGIE  T K +SEI+ EEI+     + VLSGP+ A EV     T   ++S + E  + +Q V ++   FRVY + D  GVE+GGALKN+ A+ AG++  LG G+N K+ LITR LAE+ R     GANP+TF GLAGVGDLIVTC+S  SRN++ G  LGQG  L+D +  +G V EGV T K     A+E+GV MP+   L+ +LF+G+   + ++ LM    K +
Sbjct:  101 IVAVSKGIEPGTHKRVSEIVTEEISEWLEDVVVLSGPSHAEEVVLRHPTTVAVSSPNMEAAQCIQDVFMNHHYFRVYTNPDLVGVEVGGALKNIIALAAGISDGLGYGDNAKAALITRGLAEIARLGCALGANPLTFAGLAGVGDLIVTCTSVHSRNWRAGHMLGQGKKLDDVLESMGMVVEGVRTTKAAYELAKELGVKMPITEVLYEVLFDGKNPKEAVDSLMARGKKQE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_CORK4 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=gpsA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.888e-46
Identity = 103/232 (44.40%), Postives = 142/232 (61.21%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIA--PRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRL-GEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +VSL KG+E  T + MSE++ E +  P  +I VLSGPNLA+EVA+    ATV+A  D +  +RVQ       FR Y + D  G E+GG  KNV A+ AGMA    +G NT + +ITR LAE  R     GANP TF GLAG+GDL+ TC+SP SRN   G  L QG+SLE+A     G+VAEGVN  + +++ A+   V +P+   + ++ F+G T+ + I  LM  + K +
Sbjct:  101 IVSLPKGLERDTARRMSEVIAEASGRPSEKIAVLSGPNLAKEVADEQPAATVVACTDHDSAKRVQEACTTAYFRPYTNTDVIGCEIGGVAKNVIALAAGMAAGQNLGFNTAATIITRGLAETVRLGTALGANPATFSGLAGLGDLVATCNSPLSRNRTFGEHLSQGMSLEEAQEACHGQVAEGVNACRAIQSLARAHSVDVPIADAVVSVCFDGATVKESIMNLMERDTKAE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_BACP2 (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus pumilus (strain SAFR-032) GN=gpsA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.888e-46
Identity = 99/224 (44.20%), Postives = 139/224 (62.05%), Query Frame = -3
Query:   22 VSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLM 684
            V ++KGIE  T   +S+++E+  P   R  + VLSGP+ A EV     T   ++SE+ E  + VQ +     FRVY + D  GVE+GGALKN+ A+ AG+   LG G+N K+ LITR LAE+ R     G NP+TF GL GVGDLIVTC+S  SRN++ G  LG+G  LE+ + ++G V EGV T K     ++E  V MP+   L+ +LFEG+ ++  +E LM
Sbjct:  102 VHVSKGIEPDTLLRISQMIEQEVPDEKREAVVVLSGPSHAEEVGLRHPTTVTVSSENIEAAQFVQDLFMNNNFRVYTNPDVIGVEIGGALKNIIALAAGITDGLGYGDNAKAALITRGLAEIARLGTQMGGNPLTFAGLTGVGDLIVTCTSVHSRNWRCGNLLGKGYKLEEVLEKMGMVVEGVRTTKGAYQLSKEYKVSMPITEALYHVLFEGKKVDDAVESLM 325          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA1_SALRD (Glycerol-3-phosphate dehydrogenase [NAD(P)+] 1 OS=Salinibacter ruber (strain DSM 13855) GN=gpsA1 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.888e-46
Identity = 103/244 (42.21%), Postives = 145/244 (59.43%), Query Frame = -3
Query:    7 RCSRLTSDGLAGKXLVSLTKGIEAHTFKLMSEILEEI---APRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPK 729
            R   L     +G  LV+L+KGIE  T   MS++L+++    P  +IG L GP+ A EVAE   TA V A+ DE     +Q V      RVY + D  GVE+GG+ KNV AI AG+A  +  G+N K+ L+TR LAE+ R     GA+P TF GLAG+GDL+VTC SP SRN  +G  +  G SL++ +  +  VAEGV T + +   A+  GV MP+   +HAILF+ ++  ++++ LM    K
Sbjct:   87 RAEHLRPHAHSGVRLVALSKGIENETLLTMSQVLDDVFESVPSDQIGALYGPSHAEEVAEGRPTAVVAAAPDEGEARHIQKVFMTERLRVYMNTDVLGVEIGGSAKNVLAIAAGIADGVSYGDNAKAALVTRGLAEIRRLGQALGADPQTFAGLAGIGDLVVTCMSPHSRNRYLGEQISTGKSLDEVLNDMAMVAEGVRTTRSVYNLAKHHGVEMPITEAVHAILFDDKSPRKMVKRLMTRSAK 330          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_SYNFM (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=gpsA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.632e-46
Identity = 98/230 (42.61%), Postives = 143/230 (62.17%), Query Frame = -3
Query:    7 LVSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPK 687
            +V+ TKGIE  T   MS I  E+ P   + R+  LSGP+ AREVA    TA  +A ++ +  + VQ V+    FR+Y S D+ GVE+ GA KNV A+ AG++  +  G N+++ LITR LAE+TR  V  G+NP+TFLGLAG+GDL++TC+   SRN  VG  LGQG  ++D +  +  VAEGV T K +   A+ +GV MP+   ++ +++E +    V+  LM  + K
Sbjct:  104 VVNATKGIENDTLLTMSGIWREVLPPGLQVRVLCLSGPSFAREVARKVPTAVTLAGDELQTAKAVQHVISTGYFRIYTSLDKIGVEIAGASKNVIALAAGVSDGMSFGYNSRAALITRGLAEITRLGVKMGSNPLTFLGLAGIGDLLLTCTGDLSRNRTVGIQLGQGRRIKDILAEMRMVAEGVKTAKSIHFLARRIGVEMPICEQVYRVIYEDKDPRVVVRELMERDLK 333          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_STAHJ (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gpsA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.632e-46
Identity = 97/234 (41.45%), Postives = 145/234 (61.97%), Query Frame = -3
Query:    1 KXLVSLTKGIEAHTFKLMSEILEEIAPRAR---IGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 693
            K  + + KGIE  TFK +SE++E+         IGVLSGP+ A EV     T    +S+DE++ + +Q +      RVY + D  GVELGGALKN+ A+ +G+   +G G+N K+ L+TR LAE++R     GA+PMTFLGL G+GDLIVTC+S  SRNY +GF LGQG ++++A+  +  V EG+ T   +   A++  V MP+   L+ +LFE   +   ++ LM  + K++
Sbjct:   99 KTFIHVAKGIENDTFKRVSEMIEDSISEDHNGGIGVLSGPSHAEEVVIKQPTTVAASSKDEKVSKLIQDLFMNDYLRVYTNNDLVGVELGGALKNIIAVASGIVAGMGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNYTLGFKLGQGQTMDEALNEMNMVVEGIYTTNSVYHLAKQQNVDMPITNALYKVLFEDNPVKDSVKDLMGRDKKSE 332          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_METFK (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gpsA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.632e-46
Identity = 101/230 (43.91%), Postives = 141/230 (61.30%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILE-EIAPRARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +V  +KG+EA T KL  E+ + E+      GVLSGP+ A E+     TA  +A+ D E   R  A+LHG  FRVY S D  GV +GGALKNV AI AG++  +  G N ++ LITR +AEMTRF V  G    TF+GL G GDLI+TC+   SRN +VG  L  G +L++ +  LG VAEGV+T + +  +A ++GV MP+   +  +L  GR+  Q +E L+  E K++
Sbjct:   98 VVWASKGLEAATAKLPHEVAQDELGDSRHWGVLSGPSFAAELVRGLPTAVTLAANDAEFAARAGAMLHGGNFRVYTSTDVIGVSVGGALKNVLAIAAGISDGMQCGNNARAALITRGIAEMTRFGVALGGAKETFMGLTGAGDLILTCTGQYSRNREVGLRLANGQTLQEILKTLGHVAEGVHTAREVVKRAGQLGVEMPITQEVDQVLSHGRSPRQAMENLLSREQKSE 327          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_LACBA (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=gpsA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.632e-46
Identity = 97/232 (41.81%), Postives = 146/232 (62.93%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAP---RARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            L+  +KGIE  T+K +S++LEE  P   R  + VLSGP+ A +VA   +T    AS   E  + VQ +     FRVY + D  GVE+G ALKN+ A+ AG    LG G+N K+ L+TR LAE++R   + GA+PMTF+GL+GVGD+IVT +S  SRN++ G  LG+G +L+D +  +G V EG+ T K     ++E GV MP+   ++ +++EG+ +   I  LM+ E +++
Sbjct:  105 LIHASKGIEQQTYKRLSQVLEEEIPAENRQAVTVLSGPSHAEDVARKDITLVTAASASPEAAKYVQKLFMTSYFRVYTNPDIIGVEIGAALKNIIALGAGALHGLGYGDNAKAALMTRGLAEISRLGTSFGADPMTFIGLSGVGDIIVTATSSNSRNWRAGDELGRGEALDDVINHMGMVIEGLATTKAAYELSRERGVSMPITEAIYQVIYEGKDIRTAISDLMQREGRSE 336          
BLAST of EY720473 vs. ExPASy Swiss-Prot
Match: GPDA_GEOKA (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Geobacillus kaustophilus GN=gpsA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.632e-46
Identity = 101/232 (43.53%), Postives = 145/232 (62.50%), Query Frame = -3
Query:    1 LVSLTKGIEAHTFKLMSEILEEIAPR--ARIGVLSGPNLAREVAEHALTATVIASEDEELCERVQAV-LHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEDAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTD 687
            +V+++KGIE  T K +SE++ E      A + VLSGP+ A EV     T   ++S + E   R+Q + ++   FRVY + D  GVE+GGALKN+ A+ AG++  LG G+N K+ LITR LAE+ R     GANP+TF GL GVGDLIVTC+S  SRN++ G+ LGQG  L++ +  +G V EGV T K     A+E+GV MP+   L+ +LF G+   + ++ LM    K +
Sbjct:  101 IVAVSKGIEPGTHKRVSEMVAEEMGEWLADVVVLSGPSHAEEVVLRHPTTVAVSSPNMEAARRIQDIFMNHHYFRVYTNPDLIGVEVGGALKNIIALAAGISDGLGYGDNAKAALITRGLAEIARLGCALGANPLTFAGLTGVGDLIVTCTSVHSRNWRAGYMLGQGKKLDEVLESMGMVVEGVRTTKAAYELAKELGVKMPITEALYDVLFAGKDPKEAVDSLMARGKKEE 332          
The following BLAST results are available for this feature:
BLAST of EY720473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPDA_OCEIH3.888e-4644.08Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Oc... [more]
GPDA_GEOTN3.888e-4645.26Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ge... [more]
GPDA_CORK43.888e-4644.40Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Co... [more]
GPDA_BACP23.888e-4644.20Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ba... [more]
GPDA1_SALRD3.888e-4642.21Glycerol-3-phosphate dehydrogenase [NAD(P)+] 1 OS=... [more]
GPDA_SYNFM6.632e-4642.61Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Sy... [more]
GPDA_STAHJ6.632e-4641.45Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=St... [more]
GPDA_METFK6.632e-4643.91Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Me... [more]
GPDA_LACBA6.632e-4641.81Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=La... [more]
GPDA_GEOKA6.632e-4643.53Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Ge... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720473 ID=EY720473; Name=EY720473; organism=Citrus sinensis; type=EST; length=860bp
ATCGGTCTTCGGCTCGGCCCGCATCAGCAACTCGATGACCTGGTTCAAGG
TGCGCCCTTCAAACAGGATCGCGTGCAAACCCGCGACCAGCGGCATATAC
ACCCCGACTTCCTGAGCCTTGGCCTTCAGCACCTTCAGGGTGTTGACGCC
TTCGGCCACTTCGCCCAAACGCGTCACGGCGTCTTCCAGGCTCAGGCCCT
GGCCGAGGGCAAAACCGACCTGATAGTTGCGGCTTTTCGGTGACGAGCAG
GTGACGATCAGGTCGCCCACACCCGCCAGGCCAAGGAAGGTCATCGGGTT
GGCGCCCTGGTTGACCGCAAAGCGCGTCATCTCGGCCAAGGCACGGGTGA
TCAGCATGCTCTTGGTGTTTTCGCCCATGCCCAGCGCAACCGCCATGCCG
GCGATGATCGCGTAGACGTTTTTTAACGCCCCGCCCAGTTCGACGCCGAA
GCGGTCAGCACTGGCGTAAACGCGGAAGGTGCGACCGTGCAGCACTGCCT
GCACCCGCTCGCAGAGTTCTTCGTCTTCACTCGCGATCACGGTGGCGGTC
AGGGCGTGCTCAGCCACTTCCCGCGCCAGGTTCGGTCCGGACAACACGCC
AATGCGCGCTCGGGGGGCGATTTCTTCAAGGATTTCGCTCATCAACTTGA
AGGTGTGCGCCTCGATGCCCTTGGTCAGGCTGACCAGCANCTTGCCCGCC
AACCCGTCGGAGGTGAGGCGCGAGCACCGAACGCAAGGCACTGGATGGCC
AACCGACGAAACACAAGTCGCACTCGGTCAACGTCGCCAGCAAATCTGTC
GACGGCTCAACAGGGGGCAGATTCTTGATTCCTTTAGGGAACCGGGGGGT
TTCCCGGTTT
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