EY674164

Overview
NameEY674164
Unique NameEY674164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.551e-36
Identity = 108/284 (38.03%), Postives = 138/284 (48.59%), Query Frame = 2
Query:  104 WCLTSVS-QAQSSLIKSSTLRPSFPARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGIGAAVEYAVLHLKVSNIVVIGHSGLWWHQRTHVFHI*WKQLHRFH*KLGEKLHPCQV*GVNKTLVTTPFEDQCT*CEKAAREVALH*LANHPFVKEGLLN 952
            WC  +V+ +A+SS I +S      PA  +S +  P LIR  PV AAP                                    VA A ++                +VER+K GF  FK E Y+K P  +  L  GQ+PKYMVFAC+DSRVCPS  L  +PGEAF +RN+AN+VP Y + KYAG+G+A+EYAV  LKV  IVVIGHS     +              F         P +   V     + PF+DQCT  EK A  V+L  L  +PFVKEG+ N
Sbjct:   74 WCYATVAPRARSSTIAASL---GTPAPSSSASFRPKLIRTTPVQAAP------------------------------------VAPALMDA---------------AVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKK-KVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTN 302          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.870e-19
Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query:  422 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGIGAAVEYAVLHLKVSNIVVIGHS 721
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +  G+ A+VEYAV  L+VS+IV+ GHS
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHS 99          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.870e-19
Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query:  422 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGIGAAVEYAVLHLKVSNIVVIGHS 721
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +  G+ A+VEYAV  L+VS+IV+ GHS
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHS 99          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.774e-17
Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 2
Query:  431 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGIGAAVEYAVLHLKVSNIVVIGHS 721
            I +GF+ F+R+ Y     L+  LA  Q+PK +  ACSDSRV P  +   +PGE FV+RN  NIVP Y   +  G+ A+VEYAV  L V +IVV GHS
Sbjct:    4 IIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYG-PQPGGVSASVEYAVAVLGVGDIVVCGHS 99          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.832e-16
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query:  422 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGIGAAVEYAVLHLKVSNIVVIGHS 721
            + ++ EG  HF+   Y  +  L+ + AKGQ P+ +   CSDSR+ P+ +     GE FV+RN  N++PP+      G GA++EYA+  L + ++VV GHS
Sbjct:    1 MRKLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPFGAAN-GGEGASIEYAIAALNIEHVVVCGHS 99          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CYNT_SYNY3 (Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803) GN=icfA PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.522e-15
Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:  422 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGIGAAVEYAVLHLKVSNIVVIGHS 721
            ++R+ EG   F+   +  +  L+ +L+ GQ P+ +   CSDSRV P+ +   + G+ FV+RN  NI+PPY      G GAA+EYA++ L+++ I+V GHS
Sbjct:    1 MQRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIVCGHS 99          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori J99 GN=cynT PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.683e-14
Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 2
Query:  440 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYA-GIGAAVEYAVLHLKVSNIVVIGHSGLWWHQRTHVFH 757
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   QPGE +V+RN+ N++PP    K +    A+VEYA+ H+ V N+++ GHS        H+ H
Sbjct:    6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIH 112          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CAN_EMENI (Carbonic anhydrase OS=Emericella nidulans GN=AN1805 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.896e-14
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  395 PSDTKAF-----DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGIGAAVEYAVLHLKVSNIVVIGH 718
            PSD KA       + ++I E    +   K   +P  +++LA GQSP+Y+   CSDSRV  + ++    GE FV RN+AN+VP  D +      + + YAV HLKV +IVV GH
Sbjct:    4 PSDRKAVTRYLEQTHDKIFESNRAWVASKKGADPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTIDLSSM----SVINYAVGHLKVKHIVVCGH 112          
BLAST of EY674164 vs. ExPASy Swiss-Prot
Match: CYNT_HELPY (Carbonic anhydrase OS=Helicobacter pylori GN=cynT PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.057e-12
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 2
Query:  440 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYA-GIGAAVEYAVLHLKVSNIVVIGHSGLWWHQRTHVFH 757
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   +PGE +V+ N+ N+ PP    K +    A++EYA+ H+ V N+++ GHS        H+ H
Sbjct:    6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIH 112          
The following BLAST results are available for this feature:
BLAST of EY674164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CAHC_HORVU4.551e-3638.03Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CYNT_ECOLI3.870e-1947.00Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO573.870e-1947.00Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_PSEAE2.774e-1748.45Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CYNT_SYNE76.832e-1638.00Carbonic anhydrase OS=Synechococcus elongatus (str... [more]
CYNT_SYNY31.522e-1539.00Carbonic anhydrase OS=Synechocystis sp. (strain PC... [more]
CYNT_HELPJ1.683e-1436.45Carbonic anhydrase OS=Helicobacter pylori J99 GN=c... [more]
CAN_EMENI4.896e-1439.82Carbonic anhydrase OS=Emericella nidulans GN=AN180... [more]
CYNT_HELPY2.057e-1233.64Carbonic anhydrase OS=Helicobacter pylori GN=cynT ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-058-B12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674164 ID=EY674164; Name=EY674164; organism=Citrus sinensis; type=EST; length=993bp
AAAAAAAAAANNNNNAANNNNNCGGTGGTTCCCCCCCCCNCNCTTTTTNN
NAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGAAAACCACGCGTC
CGCTGGTGCCTTACCTCTGTTTCTCAAGCTCAATCCTCTCTCATCAAAAG
CTCCACATTACGTCCCTCTTTCCCCGCAAGGCTCAACTCTCCTGCTTCTC
CTCCTAGCCTCATCCGAAACGAGCCCGTTTTTGCTGCACCAGCTCCTATC
ATCAACCCTAACTGGAGGGAAGACATGGCAAATCAGTCGTACGAGGAAGC
CATTGAAGCTCTCAAGAAACTTCTCAAGGAGAAGGAAGACTTGAAACCTG
TTGCTGCTGCAAAAGTAGAGCAGATTACTGCGCAGCTACAGACTCCATCT
GACACCAAAGCATTTGATTCCGTGGAGAGGATCAAAGAGGGCTTCATTCA
CTTCAAGAGAGAAAAATACGAGAAAAATCCAGCTCTGTACTCTGAGCTCG
CCAAAGGCCAAAGCCCGAAGTATATGGTATTTGCCTGCTCAGACTCCAGG
GTTTGCCCGTCCCATGTGTTGGATTTTCAACCTGGGGAAGCTTTCGTGGT
TCGCAATGTTGCTAACATTGTTCCACCCTATGATCAGACTAAATATGCTG
GAATTGGAGCTGCTGTCGAGTATGCAGTTTTGCATCTCAAGGTTTCAAAC
ATTGTGGTCATTGGGCACAGCGGCCTGTGGTGGCATCAAAGGACTCATGT
CTTTCACATTTGATGGAAACAACTCCACCGATTTCATTGAAAACTGGGTG
AAAAATTGCATCCCTGCCAAGTCTAAGGTGTTAACAAAACATTGGTGACA
ACCCCTTTTGAAGACCAATGCACATAATGTGAAAAAGCAGCGCGGGAAGT
GGCCCTCCACTAACTGGCCAACCATCCATTTGTAAAAGAAGGGTTGCTGA
ACAAAATCTGGCCCCCCAGGGGGGTACTAAGATTCCGCAATGG
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