EY685311

Overview
NameEY685311
Unique NameEY685311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_DEHSB (Chaperone protein dnaK OS=Dehalococcoides sp. (strain BAV1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.494e-12
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD--EKIGSKLDPADKKKIEDALDQAIQWLDTNQL 280
            TG++ KITIT   G LSK+E+EKM +EAE + AED + K+++EA+N  +N AYN   T++D  +KI ++L+   + KI  A+  A+Q  D   +
Sbjct:  493 TGREQKITITASSG-LSKEEVEKMTREAEAHAAEDTKRKEEIEARNVADNLAYNAEKTLRDNKDKIPAELNTELESKIA-AVRTALQGNDVEAI 584          
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_OENOB (Chaperone protein dnaK OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.240e-11
Identity = 36/92 (39.13%), Postives = 59/92 (64.13%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDALDQAIQWLDTNQL 280
            TG+  KITI N  G LS+DEI KMV++AE  +  D++ K++V+  N ++   ++   T+ D  +G KL  +DKK ++DALD+  +  D+N +
Sbjct:  460 TGKSQKITIQNP-GNLSEDEINKMVKDAESNEEADKKKKEEVDLHNQVDQLIFSSEKTLSD--VGDKLGDSDKKPVQDALDELKKAKDSNNI 548          
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_GEOUR (Chaperone protein dnaK OS=Geobacter uraniireducens (strain Rf4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11
Identity = 37/95 (38.95%), Postives = 65/95 (68.42%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED---ALDQAIQWLDTNQL 280
            TG++  I IT   G LSK+EI+KMV++AE + +ED++ ++ +EA+N  ++ AY+   ++K+   G K+D A+K+KIED   AL +A++  D + +
Sbjct:  488 TGKEQSIRITASSG-LSKEEIDKMVKDAEAHSSEDKKKRELIEARNQADSLAYSTEKSLKE--FGDKIDAAEKQKIEDGLAALKKAMEGSDADAI 579          
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_HELMI (Chaperone protein dnaK OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.115e-11
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDA---LDQAIQWLDTNQL 280
            TG + KITIT   G LSK+EIE+M+++AE +  ED + +++VE +N  ++  Y    T+KD  +G K + ADK KIE A   L +A++  D  ++
Sbjct:  464 TGNEQKITITASTG-LSKEEIERMIKDAELHAEEDRKRQEEVEIRNQADSMVYQAEKTLKD--LGDKAEAADKAKIESAKEELKKALEGTDMEEI 555          
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_DEHSC (Chaperone protein dnaK OS=Dehalococcoides sp. (strain CBDB1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.762e-11
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD--EKIGSKLDPADKKKIEDALDQAIQWLDTNQL 280
            TG++ KITIT   G LSK+E+EKM +EAE +  ED + K+++EA+N  +N AYN   T++D  +KI ++L+   + KI  A+  A+Q  D   +
Sbjct:  493 TGREQKITITASSG-LSKEEVEKMTREAEAHAVEDTKRKEEIEARNVADNLAYNAEKTLRDNKDKIPAELNTELESKIA-AVRTALQGNDVEAI 584          
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.608e-11
Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDALDQ 250
            TG++ KITIT   G LSK+EIE+M +EAE Y+ +D ++K++ EAKN  +N AY     +++   G K+D A K ++E  +++
Sbjct:  490 TGREQKITITGSSG-LSKEEIERMTKEAEAYREQDLKNKERAEAKNNADNAAYQAEKLLRE--YGDKVDSAKKMEVEKCIEK 568          
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSM (Chaperone protein dnaK OS=Geobacter sp. (strain M21) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.608e-11
Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED---ALDQAIQWLDTNQL 280
            TG++  I IT   G LSK+E+EKMV+EAE + A+D++ ++ +EAKN  +N  Y    ++ +   G K+D ++K+KIE+   AL +A++  D +++
Sbjct:  488 TGKEQSIRITASSG-LSKEEVEKMVREAEAHAADDKKKRELIEAKNQADNLIYQTEKSLTE--FGDKIDASEKQKIEEGVAALKKALEGSDADEI 579          
BLAST of EY685311 vs. ExPASy Swiss-Prot
Match: DNAK_GEOBB (Chaperone protein dnaK OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.608e-11
Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED---ALDQAIQWLDTNQL 280
            TG++  I IT   G LSK+E+EKMV+EAE + A+D++ ++ +EAKN  +N  Y    ++ +   G K+D ++K+KIE+   AL +A++  D +++
Sbjct:  488 TGKEQSIRITASSG-LSKEEVEKMVREAEAHAADDKKKRELIEAKNQADNLIYQTEKSLTE--FGDKIDASEKQKIEEGVAALKKALEGSDADEI 579          
The following BLAST results are available for this feature:
BLAST of EY685311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
DNAK_DEHSB9.494e-1242.55Chaperone protein dnaK OS=Dehalococcoides sp. (str... [more]
DNAK_OENOB1.240e-1139.13Chaperone protein dnaK OS=Oenococcus oeni (strain ... [more]
DNAK_GEOUR1.619e-1138.95Chaperone protein dnaK OS=Geobacter uraniireducens... [more]
DNAK_HELMI2.115e-1140.00Chaperone protein dnaK OS=Heliobacterium modestica... [more]
DNAK_DEHSC2.762e-1141.49Chaperone protein dnaK OS=Dehalococcoides sp. (str... [more]
DNAK_METI43.608e-1141.46Chaperone protein dnaK OS=Methylacidiphilum infern... [more]
DNAK_GEOSM3.608e-1137.89Chaperone protein dnaK OS=Geobacter sp. (strain M2... [more]
DNAK_GEOBB3.608e-1137.89Chaperone protein dnaK OS=Geobacter bemidjiensis (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-D03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685311 ID=EY685311; Name=EY685311; organism=Citrus sinensis; type=EST; length=474bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCCTTGATCAG
GCAATTCAATGGCTTGATACCAACCAGCTGGCTGAAGCCGATGAATTTGA
AGACAAGAAGAAGGAGCTTGGAAACCTTTGCAATCCCTTCATTGCCAAAA
AGTATCAAGGGGCCTGGGGGGGAATATGGGGCGGGGGCCTGGATGATGAA
TGCCCCTCCCCCCTGGGGGGCCAGGGCCCCCCGGGCCCCAAAATTTGGGA
AACTTGAACAAATCTTTCCCCTTT
back to top