EY650467

Overview
NameEY650467
Unique NameEY650467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.770e-35
Identity = 96/194 (49.48%), Postives = 116/194 (59.79%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*GSTKG-GKNDPEFAKKLPLGISL-CHDAFGTAPEPM-PHRGEHKNXKPSGAGFLWRRNWTPGGGRFK-PKRPL 861
            MA  SV  L+ ADL GK+VFVR D NVPL+++  ITDDTRIRAA+PTIK+L + GAKVIL SH+GRPKG V     L P+  RLSELLG  V K DDC G  V++A+ +     V LLE      G  KNDPEFAK+L     +  +DAFGTA        G   +   S AG L  +      G  + PKRPL
Sbjct:    1 MAKKSVANLTEADLSGKRVFVRVDFNVPLNESGVITDDTRIRAALPTIKYLTEKGAKVILGSHMGRPKGQVVDSMRLTPVAARLSELLGQSVTKCDDCVGDAVNQAIANLGNGQVALLENLRFNPGEEKNDPEFAKQLAANADIYVNDAFGTAHRAHGSTEGVTHHVDTSVAGLLIEKELQFLKGAIEAPKRPL 194          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.375e-34
Identity = 89/174 (51.15%), Postives = 105/174 (60.34%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*G-STKGGKNDPEFAKKLPLGISL-CHDAFGTAPEP-MPHRGEHKNXKPSGAGFL 807
            M+  S+  LS AD+ GK+  VR D NVP+DD   ITDDTRIRAA+PTI+ L Q GAKVIL+SH GRPKGV  K  L P+  RLSELLG +V+K DD  G +V   V +     VLLLE      +  KND EFAKKL        +DAFGTA        G  K   PS AG+L
Sbjct:    1 MSKKSLASLSSADISGKRALVRVDFNVPVDDQGKITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDDKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVAALQNGQVLLLENVRFYPEEEKNDAEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYL 174          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_SYNY3 (Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803) GN=pgk PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 5.223e-34
Identity = 96/194 (49.48%), Postives = 113/194 (58.25%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*GSTKGGK-NDPEFAKKLPLGISL-CHDAFGTAPEP-MPHRGEHKNXKPSGAGFLWRRNWTPGGGRFK-PKRPL 861
            ++  S+  L+ ADL GK+VFVR D NVPLD N +ITDDTRIRAA+PTIK L+  GAKVIL SH GRPKG V     L P+  RL ELLG  VVK DDC G +V   + S P  GV LLE      G + ND EFAK L     L  +DAFGTA        G      P+ AG+L  +      G  + PKRPL
Sbjct:    2 LSKQSIANLTEADLAGKRVFVRVDFNVPLD-NGSITDDTRIRAALPTIKDLLSKGAKVILGSHFGRPKGKVVDSMRLTPVGDRLGELLGQPVVKCDDCIGAEVTAKIASLPNGGVALLENLRFHAGEEGNDAEFAKALAANADLYVNDAFGTAHRAHASTEGVTHFLSPNVAGYLIEKELQFLQGAIEAPKRPL 194          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_GLOVI (Phosphoglycerate kinase OS=Gloeobacter violaceus GN=pgk PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.164e-33
Identity = 92/193 (47.67%), Postives = 116/193 (60.10%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*G-STKGGKNDPEFAKKLP-LGISLCHDAFGTAPEP-MPHRGEHKNXKPSGAGFLWRRNWTPGGGRFK-PKRPL 861
            MA  +V  L  ADLKGK+  VR D NVPLD++  ITDDTRIRAA+PTI  L   GA+VIL SHLGRPKG   +  L P+  RL ELLG  V KADD  GP+V++AV    +  VLLLE      +  KN+PEFA+KL  L     +DAFGTA        G  +  +P+ AG L ++     G   + P+RP+
Sbjct:    1 MAKKTVEALGAADLKGKRALVRVDFNVPLDESGQITDDTRIRAALPTIGMLTGGGARVILVSHLGRPKGFDDQLRLTPVAKRLGELLGQTVYKADDVIGPEVEEAVKKLEDGDVLLLENVRFYPEEEKNNPEFAQKLAGLAELYVNDAFGTAHRAHASTEGVARYLRPAVAGLLLQKELEYLGKALESPERPV 193          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_SYMTH (Phosphoglycerate kinase OS=Symbiobacterium thermophilum GN=pgk PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.985e-33
Identity = 88/166 (53.01%), Postives = 109/166 (65.66%), Query Frame = 1
Query:  331 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*G-STKGGKNDPEFAKKLP-LGISLCHDAFGTAPEP-MPHRGEHKNXKPSGAGFLWRR 816
            D+KGK+VFVR D NVPL+D + ITDDTRIRAAVPTI++L++ GA  +L+SHLGRPKG    K+SLAP   RLSELLG +VV A DC G +V++ V   P   V+LLE      +  KNDPEFA KL  LG    +DAFGTA       RG   +     AGFL ++
Sbjct:   10 DVKGKRVFVRVDFNVPLEDGR-ITDDTRIRAAVPTIRYLVEEGAVAVLASHLGRPKGQRNEKYSLAPCARRLSELLGREVVFAPDCIGEEVERLVAEQPPGSVVLLENVRFYAEEEKNDPEFAAKLARLGEIFVNDAFGTAHRAHASTRGVADHMPVRVAGFLMQK 174          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.386e-33
Identity = 91/180 (50.56%), Postives = 107/180 (59.44%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG------VTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*GSTKGGK-NDPEFAKKLPLGISL-CHDAFGTAPEP-MPHRGEHKNXKPSGAGFL 807
            M+  +V  LS ADL GK+V VR D NVPLDD   ITDDTRIRAA+PTI+ L   GAKVILSSH GRPKG      V  KF L P+  RLSELLG  V K +DC G +V   V +     VLLLE      G + N PEFA++L     L  +DAFGTA        G  +  +PS AG+L
Sbjct:    1 MSKKTVANLSAADLAGKRVLVRVDFNVPLDDQGKITDDTRIRAALPTIQDLTSKGAKVILSSHFGRPKGETFAERVKDKFRLTPVAARLSELLGKPVPKPNDCIGEEVKAQVAAMQNGDVLLLENVRFHPGEEANTPEFAQELASVADLYVNDAFGTAHRAHASTEGVTRYLRPSVAGYL 180          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.543e-33
Identity = 92/193 (47.67%), Postives = 110/193 (56.99%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*GSTKG-GKNDPEFAKKLPLGISL-CHDAFGTAPEP-MPHRGEHKNXKPSGAGFLWRRNWTPGGGRFK-PKRPL 861
            M+  SV +LS ADL+GK+V VR D NVP+D+   ITD+TRIRAA+PTI+ LI  GAKVIL SH GRPKGV  K  L P+  RLSELL   V K DDC G  V     +     V LLE      G  KNDPEFAK+L     +  +DAFGTA        G  +   P  AGFL  +         + P+RPL
Sbjct:    1 MSKKSVAQLSAADLEGKRVLVRVDFNVPVDEKGVITDETRIRAALPTIQDLISKGAKVILVSHFGRPKGVDEKLRLTPVAQRLSELLHKPVAKLDDCIGDAVIAHTQAMANGDVCLLENVRFHPGEEKNDPEFAKQLAACAEVYVNDAFGTAHRAHASTAGVTQYLSPCVAGFLMEKELEYLQNAIEHPRRPL 193          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.543e-33
Identity = 89/175 (50.86%), Postives = 102/175 (58.29%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*G-STKGGKNDPEFAKKLPLGISL-CHDAFGTAPEP-MPHRGEHKNXKPSGAGFL 807
            M   ++  LS AD++GK+V VR D NVPLDD  NITDDTRIRAA+PTI+ LI  GAKVIL SH GRPKG V     L P   RLSELLG  VV  DDC G  V +AV       V LLE      +   NDPEF+K+L     L  +DAFGTA        G      PS AG+L
Sbjct:    1 MPKKTIANLSRADVEGKRVLVRVDFNVPLDDAGNITDDTRIRAALPTIQDLISKGAKVILCSHFGRPKGKVVESMRLTPTAKRLSELLGQDVVMCDDCVGASVTEAVNKLENGQVALLENLRFHAEEEGNDPEFSKQLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYL 175          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.680e-32
Identity = 87/175 (49.71%), Postives = 105/175 (60.00%), Query Frame = 1
Query:  295 MANNSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*GSTKGGK-NDPEFAKKLPLGISL-CHDAFGTAPEP-MPHRGEHKNXKPSGAGFL 807
            M+  ++  L+ ADL GK+V VRAD NVPLD +  ITDDTRIRAA+PTI+ L   GAKVIL+SH GRPKG V     L P+  RLSELLG  V K DDC G +V   V +     V LLE      G + NDPEFA++L     L  +DAFGTA        G   +  PS AG+L
Sbjct:    1 MSKKTIANLTSADLSGKRVLVRADFNVPLDGDGKITDDTRIRAALPTIQDLTSKGAKVILASHFGRPKGQVNESMRLTPVAARLSELLGQAVTKCDDCIGDEVAAKVGALQNGQVALLENVRFHSGEEANDPEFARQLASVADLYVNDAFGTAHRAHASTEGVTHHLSPSVAGYL 175          
BLAST of EY650467 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.195e-32
Identity = 88/171 (51.46%), Postives = 105/171 (61.40%), Query Frame = 1
Query:  331 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCXGPKVDKAVXSPPESGVLLLET*GSTKG-GKNDPEFAKKLPLGISL-CHDAFGTAPEPMPHRGEH---KNXKPSGAGFLWRRNWT 825
            DL+ K VF+R D NVP DDN NIT+DTRI  AVPTIK+ I+NGAKVIL+SHLGRPKG   PK+++AP   RLSELLG +V +A DC GP VD  V +     VL+LE      G  KNDP+FA KL  G  +  +DAF  A     H   H   K      AGFL +   T
Sbjct:   11 DLREKLVFIRVDFNVPQDDNGNITEDTRIVGAVPTIKYAIENGAKVILASHLGRPKGEKKPKYTMAPAARRLSELLGKEVKQATDCFGPDVDAMVAALQPGDVLMLENVRFYPGEEKNDPDFACKLANGCEIYVNDAF--AVSHRAHASVHAITKCIPVIAAGFLMKNEMT 179          
The following BLAST results are available for this feature:
BLAST of EY650467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SYNP22.770e-3549.48Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_NOSP71.375e-3451.15Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_SYNY35.223e-3449.48Phosphoglycerate kinase OS=Synechocystis sp. (stra... [more]
PGK_GLOVI1.164e-3347.67Phosphoglycerate kinase OS=Gloeobacter violaceus G... [more]
PGK_SYMTH1.985e-3353.01Phosphoglycerate kinase OS=Symbiobacterium thermop... [more]
PGK_CYAP43.386e-3350.56Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_THEEB7.543e-3347.67Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_CYAP77.543e-3350.86Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_ACAM11.680e-3249.71Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_GEOSF2.195e-3251.46Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-011-D02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650467 ID=EY650467; Name=EY650467; organism=Citrus sinensis; type=EST; length=951bp
CCAAAACCCACTTCCCATTTCTCCACTTTGTCGACAAAGTTTCAATCTTT
TGCGCCTTTACTACGCCACTCCACTCCCACCACATCAATGGCTTCAGCCA
CCGCTCCCACTACTTTATCTCTCGTCAAAACCGCCGCAAGTTCATCCCTT
TCTTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAG
GCTGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGA
GGCTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCG
AATAATAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGT
GTTTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTA
CTGATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATT
CAAAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGG
TGTTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAAC
TCCTGGGCATTCAGGTTGTGAAGGCTGATGACTGCNATGGTCCAAAGGTA
GATAAAGCTGTANCCTCACCTCCTGAAAGCGGNGTCCTTCTTCTTGAAAC
GTGAGGGTCTACAAAGGGAGGAAAAAACGATCCTGAGTTTGCCAAAAAGC
TGCCTCTTGGCATATCTTTATGTCATGATGCCTTTGGGACCGCTCCAGAG
CCCATGCCTCACCGGGGGGAACACAAAAATTNGAAGCCCTCTGGTGCTGG
TTTCCTCTGGAGAAGGAACTGGACTCCTGGTGGGGGCCGGTTCAAGCCCA
AAAGGCCATTGCCGCATTGGGGGGCGGGAAAGGGTCACCAAAATGGGGTT
TTGAGCCCTCCAAAACAGGGAACCCCACCCCGGGGGGGGATGACCCCACT
T
back to top