EY650375

Overview
NameEY650375
Unique NameEY650375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650375 vs. ExPASy Swiss-Prot
Match: S2610_MOUSE (Solute carrier family 26 member 10 OS=Mus musculus GN=Slc26a10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12
Identity = 48/160 (30.00%), Postives = 82/160 (51.25%), Query Frame = 1
Query:  184 AFSFLRGLFPILNWGRNYK-ASKFKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQN-VQDPAA--------DPVAYRKL--VFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAI 627
            A+  L    P L W   Y+  +    D +AG+T+  + +PQ + +A L  + P +GLYTS  P LIY+L+G+ R ++ G  AV+S++  ++++  V +P A        + +  R++     V F +G       + +LG L  FLS   I    +GAA+
Sbjct:   74 AWRVLLARLPPLRWLPQYRWRAWLLGDAVAGVTVGVVHVPQGMAFALLTSVPPVFGLYTSFFPVLIYSLLGTGRHLSTGTFAVLSLMTGSVVERVVPEPLAGNLSGIEREQLEARRVGAAAAVAFGSGALMLGMFVLQLGVLSTFLSEPVIKALTSGAAL 233          
BLAST of EY650375 vs. ExPASy Swiss-Prot
Match: S26A9_XENTR (Solute carrier family 26 member 9 OS=Xenopus tropicalis GN=slc26a9 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11
Identity = 47/164 (28.66%), Postives = 76/164 (46.34%), Query Frame = 1
Query:  190 SFLRGLFPILNWGRNYKAS-KFKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSAL---------MQNVQDPA------ADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVI 633
            +F+  LFPIL+W   Y       +D + G++  ++ IPQ + +A LA L P  GLY+S  P ++Y  MG   ++  G  AV+S+++  +          QNV          A   A   +  T+     + Q      + GF+  +LS + I GFM  A + I
Sbjct:   50 NFIFRLFPILSWLPKYNIKGNLLNDALGGISAGTIQIPQGMAFALLANLPPVNGLYSSFFPLVVYFFMGGIPQMVPGTFAVISIIVGNVCLKLAPESHFQNVTSNGTITNIEAMNTARMHISATLACLTAIIQIALSFVQFGFVAIYLSESFIRGFMTAAGLQI 213          
BLAST of EY650375 vs. ExPASy Swiss-Prot
Match: SULP3_CAEEL (Sulfate permease family protein 3 OS=Caenorhabditis elegans GN=sulp-3 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  196 LRGLFPILNWGRNYKAS-KFKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNV 465
            L    PI+ W   Y  S  F  DL  GLT+A  S+PQ I  A++  + P YGLYT++ P  +Y   G+S+  A+G  AV+S++    ++ V
Sbjct:   41 LLSFLPIITWLPKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVPPVYGLYTAIFPSFLYIFFGTSKHNALGGFAVLSLMTHGAIEKV 131          
The following BLAST results are available for this feature:
BLAST of EY650375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
S2610_MOUSE3.113e-1230.00Solute carrier family 26 member 10 OS=Mus musculus... [more]
S26A9_XENTR1.183e-1128.66Solute carrier family 26 member 9 OS=Xenopus tropi... [more]
SULP3_CAEEL7.668e-1137.36Sulfate permease family protein 3 OS=Caenorhabditi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-C12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650375 ID=EY650375; Name=EY650375; organism=Citrus sinensis; type=EST; length=920bp
GGTCACCAGCAGCAGCAAGTGGAGATGGATGATACCAGTCGGACGGAGAG
GGCACGCTGGCTGCTTAACTCTCCTGACCCACCAAGTATATGGCATGAGC
TTGCAGGTTCCATAAGAGAAGCTTTCGTCCCCAGAAACAAGCTCTCTTCA
TCATCAAGAGTAAAGCAAACTTGGCGTANAAGTGCCTTTTCTTTCTTGCG
AGGACTCTTTCCAATTCTCAATTGGGGAAGAAATTATAAGGCCTCAAAGT
TTAAAAGTGATTTGATGGCAGGTTTAACTCTTGCTAGCCTGAGCATTCCT
CAGAGTATTGGATATGCCAATTTAGCAAAACTTGATCCTCAGTATGGCTT
ATACACGAGTGTCATCCCTCCTCTGATTTATGCTTTAATGGGGAGTTCAA
GAGAGATAGCGATTGGACCAGTGGCTGTGGTTTCAATGCTGCTATCCGCC
TTGATGCAGAATGTGCAAGATCCTGCAGCTGACCCCGTTGCCTACAGAAA
GCTCGTTTTTACCGTGACCTTCTTTGCTGGAGTTTTCCAATCTGTGTTTG
GTTTGTTTAGGTTGGGCTTCCTGGTGGATTTTCTTTCACATGCTGCCATC
GTTGGATTCATGGCAGGCGCAGCCATTGTTATTGGTCTTCAGCAATTGAA
GGGGCTACTTGGCATCAGTCATTGCACCAACACAACTGATGTGGTCTCTG
TCTTGGGGTCCGTTTTTNCGTCACTTCACCATTCATACTGGTATCCTCTG
AATTTCGGCCTCGGGTGGTGTTGCCTTATCTTCCTCTTAATTGCAGGGTT
ATTGGGAGGAGAAACAAAAAGCTCTTTTGGGTGCCAGCAATGCTCCTCTA
TTATCATCTATTTATCCACCTGGTAGCGGATTTACGAAGCTGATAACGTG
GGGTAAGATAGTAAACCATC
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