EY650364

Overview
NameEY650364
Unique NameEY650364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.655e-53
Identity = 100/166 (60.24%), Postives = 126/166 (75.90%), Query Frame = 3
Query:   78 IRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGPYEGLDWVS 572
            + +  K E+R++ +GLD AGKTTIL+KLK  E +  IPTIGFNVETVEYKN+ FT+WDVGG  K+RPLW+HY+ NTQ ++FVVDS+ RDR+ EA  EL ++L E ELRDA+LL+FANKQD+  A++  EIT+ L LH L   R WYIQ   A SG G YEGLDW+S
Sbjct:  397 VHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLS 562          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.655e-53
Identity = 100/166 (60.24%), Postives = 126/166 (75.90%), Query Frame = 3
Query:   78 IRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGPYEGLDWVS 572
            + +  K E+R++ +GLD AGKTTIL+KLK  E +  IPTIGFNVETVEYKN+ FT+WDVGG  K+RPLW+HY+ NTQ ++FVVDS+ RDR+ EA  EL ++L E ELRDA+LL+FANKQD+  A++  EIT+ L LH L   R WYIQ   A SG G YEGLDW+S
Sbjct:  397 VHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLS 562          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.234e-53
Identity = 101/180 (56.11%), Postives = 131/180 (72.78%), Query Frame = 3
Query:   51 MGLSFTKLFIRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGPYEGLDWVSTTSLTR 590
            MG  F+ +F  LF  +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GG   IRP WR Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G G  E ++W+  T  +R
Sbjct:    1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.141e-53
Identity = 101/180 (56.11%), Postives = 131/180 (72.78%), Query Frame = 3
Query:   51 MGLSFTKLFIRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGPYEGLDWVSTTSLTR 590
            MG  F+ +F  LF  +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GG   IRP WR Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G G  E ++W+  T  +R
Sbjct:    1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.141e-53
Identity = 101/180 (56.11%), Postives = 131/180 (72.78%), Query Frame = 3
Query:   51 MGLSFTKLFIRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGPYEGLDWVSTTSLTR 590
            MG  F+ +F  LF  +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GG   IRP WR Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G G  E ++W+  T  +R
Sbjct:    1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.041e-52
Identity = 99/161 (61.49%), Postives = 123/161 (76.40%), Query Frame = 3
Query:   93 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGPYEGLDWVS 572
            K E+R++ +GLD AGKTTIL+KLK  E +  IPTIGFNVETVEYKN+ FT+WDVG   K+RPLW+HY+ NTQ ++FVVDS+ RDR+ EA  EL ++L E ELRDA+LL+FANKQD+  A++  EIT+ L LH L   R WYIQ   A SG G YEGLDW+S
Sbjct:  382 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLS 542          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4)

HSP 1 Score: 204.527 bits (519), Expect = 6.892e-52
Identity = 99/174 (56.90%), Postives = 131/174 (75.29%), Query Frame = 3
Query:   51 MGLSFTKLFIRLF-AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGPYEGLDWV 569
            MG  F+ +F +L+ + KE+RIL++GLD AGKTTILY+L++GE+VTT PTIGFNVET+ YKN+   VWD+GG   IRP WR Y+ +T  +IFVVDS D+DR+  A  ELH ML E+EL+DA LLVFANKQD P A++A+E++ +L L  L+ R W I ++ A  GEG  EGLDW+
Sbjct:    1 MGNIFSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWL 174          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARF3_YEAST (ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae GN=ARF3 PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 7.620e-51
Identity = 97/178 (54.49%), Postives = 132/178 (74.16%), Query Frame = 3
Query:   51 MGLSFTKLFIRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-SLRQRHWYIQSTCATSGEGPYEGLDWVSTTS 581
            MG S +K+  +LF  KEM+ILM+GLD AGKTTILYKLKL +I T+ PT+GFNVETV YKN+ F +WDVGG  ++RPLWRHYF  T  LIFV+DS+ R+R+ EA++EL+ ++ E E+ + VLLV+ANKQDL +AM   E++D L L  +L+ + W +  + A SG+G  EGL W+S  +
Sbjct:    1 MGNSISKVLGKLFGSKEMKILMLGLDKAGKTTILYKLKLNKIKTSTPTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKPQEVSDFLELEKNLKNQPWCVIGSNALSGQGLVEGLSWISNNT 178          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 196.438 bits (498), Expect = 1.877e-49
Identity = 96/172 (55.81%), Postives = 123/172 (71.51%), Query Frame = 3
Query:   75 FIRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGPYEGLDWVSTTSLTR 590
            F  L   +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVE V YKN+ F VWD+GG   IRP WR Y+ NT  +I+VVDS DRDR+  ++DEL  ML E+EL  A+L+V ANKQD+   M  AE+   LGL +L+ R + I  T AT GEG  + +DW+S T  +R
Sbjct:    8 FRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179          
BLAST of EY650364 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.540e-48
Identity = 86/175 (49.14%), Postives = 127/175 (72.57%), Query Frame = 3
Query:   51 MGLSFTKLFIRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGHDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGPYEGLDWVST 575
            MG+S +  F  +F  K +++LM+GLD +GKTTILYKL L E+V+TI T+G+NVET+++K+++ T+WD+ G ++IR LW+ ++     +IFVVDS+DR R+ EA  EL +++ E+EL+   LL+FA KQD  + M   E+TD+LGLH ++ R WY+Q T    G G YEGLDW+ST
Sbjct:    1 MGISSSNPFSSIFKSKAIKLLMLGLDGSGKTTILYKLMLNEVVSTISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELKGCSLLIFATKQDCISPMEIPELTDQLGLHDIKDRRWYVQPTRTLEGIGIYEGLDWLST 175          
The following BLAST results are available for this feature:
BLAST of EY650364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARD1_MOUSE3.655e-5360.24GTP-binding protein ARD-1 OS=Mus musculus GN=Trim2... [more]
ARD1_HUMAN3.655e-5360.24GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM2... [more]
ARL1_BOVIN6.234e-5356.11ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL1_RAT8.141e-5356.11ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]
ARL1_MOUSE8.141e-5356.11ADP-ribosylation factor-like protein 1 OS=Mus musc... [more]
ARD1_RAT4.041e-5261.49GTP-binding protein ARD-1 (Fragment) OS=Rattus nor... [more]
ARL1_YEAST6.892e-5256.90ADP-ribosylation factor-like protein 1 OS=Saccharo... [more]
ARF3_YEAST7.620e-5154.49ADP-ribosylation factor 3 OS=Saccharomyces cerevis... [more]
ARL1_DROME1.877e-4955.81ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]
ARFD_DICDI3.540e-4849.14ADP-ribosylation factor D OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-C01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650364 ID=EY650364; Name=EY650364; organism=Citrus sinensis; type=EST; length=924bp
CGTTTTCTCTTAAGCAGCCTCCTCCTTCAGATCTCGTGAGATAACAGAAA
ATGGGGCTGTCATTTACGAAACTTTTTATCCGGCTTTTTGCCAAGAAAGA
GATGCGAATTCTGATGGTGGGTCTCGACGCTGCTGGTAAGACCACCATTT
TGTACAAGCTCAAGCTCGGTGAGATTGTGACAACCATTCCTACCATTGGT
TTCAACGTGGAGACTGTGGAATATAAGAACATTAGCTTCACTGTTTGGGA
TGTTGGGGGTCATGATAAGATTCGTCCTTTGTGGAGACATTACTTCCAAA
ACACTCAAGGACTTATCTTTGTGGTTGATAGCAATGATCGTGACCGTGTG
GTTGAAGCTAGAGATGAACTGCACCGGATGCTGAATGAGGATGAGTTGAG
GGATGCTGTGCTGCTTGTTTTTGCCAACAAGCAAGATCTTCCAAATGCCA
TGAATGCTGCAGAGATCACTGATAAGCTTGGTCTTCACTCACTTCGCCAA
CGCCACTGGTACATCCAGAGCACATGTGCAACATCTGGGGAAGGACCTTA
TGAGGGTCTGGACTGGGTCTCCACAACATCGCTAACAAGGCTAAGTGGAT
TGGCAAGGCTGAGCCACTCTTTGCGGGAGCATTTATGGGAATGATGTGAC
TATGCTTTCGGTTTATTTGGCGGAGAATCCTTTTTGGGCTTTACACCCTA
CGGCAAGAAAAATTGTTTGGGTGGGGCGAGATTTTCGGTGGGACCCCTTC
CTTTAAGGTTTTGGGGCTGGGCTTGGGGAAGGTAAAATTACCCTCATTTT
CCACACTCATGGGTTTTGTGGCGGGAGTTCCCCTCAACGTCTCTGTTGGC
GGTGGGGTGGGCGTGTTTCTTGTAGGCCTCTAATCTGGGCTTAAAGAAAA
AAAAGGGGGGCCGGTCTAGTGATT
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