EY650349

Overview
NameEY650349
Unique NameEY650349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 2.264e-110
Identity = 197/239 (82.43%), Postives = 209/239 (87.45%), Query Frame = 1
Query:   91 GKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            GKAV L P+ +E+   GRI+MRKT  K  +V S SPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGY IAGGPLGE+ DPLYPGGS DPLGLADDPEAFAELKV+  K+G  +       FFVQAI TGK PLENLADHLADPV
Sbjct:   15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 5.043e-110
Identity = 197/241 (81.74%), Postives = 213/241 (88.38%), Query Frame = 1
Query:   85 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            F GKAVN+ PS ++++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGY +AGGPLGE+ DPLYPGGS DPLGLADDPEAFAELKV+  K+G  +       FFVQAI TGK PLENLADHLADPV
Sbjct:   13 FAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 8.602e-110
Identity = 194/241 (80.50%), Postives = 212/241 (87.97%), Query Frame = 1
Query:   85 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            F GKAV L+PS +E++  G+++MRKT SK+  VSS SPWYGP+RVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGY +AG PLGE+ DPLYPGGS DPLGLA+DPEAFAELKV+  K+G  +       FFVQAI TGK PLENLADHLADPV
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.467e-109
Identity = 198/237 (83.54%), Postives = 209/237 (88.19%), Query Frame = 1
Query:   91 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            GKAV L PS  E+   GR+SMRKT +K VSSGSPWYGPDRVKYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGY IAGGPLGE+TDP+YPGGS DPLGLADDPEAFAELKV+  K+G  +       FFVQAI TGK PLENLADHLA PV
Sbjct:   16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLAGPV 248          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 5.576e-109
Identity = 193/241 (80.08%), Postives = 210/241 (87.14%), Query Frame = 1
Query:   85 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            F GKAV L+ S +E++  G+++MRKT +K+   SS SPWYGPDRVKYLGP SGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGY +AGGPLGE+ DPLYPGGS DPLGLA+DPEAFAELKV+  K+G  +       FFVQAI TGK PLENLADHLADPV
Sbjct:   13 FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.242e-108
Identity = 191/241 (79.25%), Postives = 209/241 (86.72%), Query Frame = 1
Query:   85 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            F GK V L+PS +E++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW KAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGY +AGGPLG + DPLYPGGS DPLGLA+DPEAFAELKV+  K+G  +       FF+QAI TGK PLENLADHL DPV
Sbjct:   13 FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNG-RLAMFSMFGFFIQAIVTGKGPLENLADHLVDPV 252          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 2.767e-108
Identity = 193/241 (80.08%), Postives = 211/241 (87.55%), Query Frame = 1
Query:   85 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            F GKAVN+ PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVWFKAG+QIF EGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGY +AGGPLGE+ DPLYPGGS DPLGLADDPEAFAEL+V+  K+G  +       FFVQAI TGK PLENLADHLADPV
Sbjct:   13 FAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 6.165e-108
Identity = 196/242 (80.99%), Postives = 208/242 (85.95%), Query Frame = 1
Query:   85 FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            F GKAVN+  S        R++MRKT +K+    +SGSPWYGPDRV YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGY IAGGPLGE+ DPLYPGGS DPLGLADDPEAF ELKV+  K G  +  +    FFVQAI TGK PLENLADH+ADPV
Sbjct:   13 FAGKAVNVPSSS---FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKG-RLAMLSMFGFFVQAIVTGKGPLENLADHIADPV 250          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 6.816e-107
Identity = 194/242 (80.17%), Postives = 209/242 (86.36%), Query Frame = 1
Query:   85 FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            F GKAVN+  S   L    R++MRKT +K+    SSGSPWYGPDRV YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA+EGY +AGGPLGE+ DPLYPGG+ DPLGLADDPEAFA++KV+  K+G  +       FFVQAI TGK PLENLADHLADPV
Sbjct:   13 FAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250          
BLAST of EY650349 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 5.770e-106
Identity = 189/221 (85.52%), Postives = 199/221 (90.05%), Query Frame = 1
Query:  139 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYXIAGGPLGELTDPLYPGGSSDPLGLADDPEAFAELKVR--KSGLEVGYVLHVRFFVQAIGTGKAPLENLADHLADPV 795
            GR+SMRKT SK+VSSGSPWYGPDRVKYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFSEGGLDYLGN SLIHAQSILAIWA QV+LMGAVEGY IAGGPLGE+TDP+YPGGS DPL LADDPEAFAELKV+  K+G  +       FFVQAI TGK PLENLADHLA+PV
Sbjct:   11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNG-RLAMFSMFGFFVQAIVTGKGPLENLADHLAEPV 230          
The following BLAST results are available for this feature:
BLAST of EY650349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
CB2A_SPIOL2.264e-11082.43Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB24_PETSP5.043e-11081.74Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB23_NICPL8.602e-11080.50Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB23_SOYBN1.467e-10983.54Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB23_PETSP5.576e-10980.08Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB22_PETSP1.242e-10879.25Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB21_PETSP2.767e-10880.08Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB22_MAIZE6.165e-10880.99Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB29_MAIZE6.816e-10780.17Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB21_SOYBN5.770e-10685.52Chlorophyll a-b binding protein, chloroplastic (Fr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-A10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650349 ID=EY650349; Name=EY650349; organism=Citrus sinensis; type=EST; length=865bp
TACACAGCTTCTATTGCTTACCCAGCTGGTGCTTCTGGATTAAATTCCTC
AATGGCAACCTCAACAATGGCTCTCTCCTCATCATTCGTCGGCAAGGCCG
TGAACCTCGCCCCTTCAGGCAATGAGCTGAGCAATGGTGGCCGCATCTCC
ATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCCCGTGGTACGG
CCCGGACAGAGTCAAGTACTTGGGCCCACTCTCTGGCGAGCCCCCAAGCT
ACTTGACTGGTGAGTTCCCTGGCGACTACGGTTGGGACACTGCCGGGCTT
TCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTCGAAGTCATCCA
CTGCAGATGGGCCATGTTGGGAGCTCTTGGATGCGTCTTCCCGGAGCTCT
TGGCCCGCAACGGAGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCGGGA
GCTCAGATCTTCAGCGAGGGCGGGCTTGACTACTTGGGAAACCCAAGCTT
GATCCACGCCCAGAGCATCTTGGCCATCTGGGCTTGCCAGGTGGTCTTGA
TGGGAGCCGTTGAGGGTTACANAATTGCTGGAGGGCCGCTCGGTGAACTG
ACTGACCCATTGTACCCAGGTGGCAGCTCTGATCCATTGGGTTTGGCTGA
TGACCCGGAGGCTTTTGCTGAGCTCAAGGTAAGGAAATCAGGATTGGAAG
TGGGCTATGTTCTCCATGTTCGGTTCTTCGTTCAGGCCATTGGCACCGGC
AAGGCACCGTTAGAGAACTTGGCCGACCACTTGGCTGACCCTGTCATAAC
AATGCCTGGGCCTACGCCACCACTTTGTTCCCGGGAAGTGACCTCCGGTG
ATAGAACTTTTCTCT
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