EY650337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.895e-17 Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 197 AGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 A T+ ++ SA+ + P+R L+ F G PP +L G PGD+G+D GL +DPE N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P S Sbjct: 44 ATTKKLTASASTSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 202
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.380e-16 Identity = 50/131 (38.17%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ SW+ AG L+Y + + ++ ++I +G EG R A P TDPI+P S Sbjct: 45 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 173
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16 Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 2 Query: 203 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 T+ VS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P S Sbjct: 38 TKQVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 191
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16 Identity = 55/144 (38.19%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 242 NRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 +RPL+ F GS PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL K G+ W+ AG L+Y + + ++ ++I +G EG R A P DPI+P S Sbjct: 53 DRPLYLGPFSGS-PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGEVEDPIYPGGS 193
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16 Identity = 53/158 (33.54%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 197 AGTRSVSVSAAAADPNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 A + VS S+ +R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P S Sbjct: 39 AKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG--GPLGEIVDPLYPGGS 194
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16 Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 P+R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P S Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVVDPLYPGGS 193
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16 Identity = 55/157 (35.03%), Postives = 81/157 (51.59%), Query Frame = 2 Query: 203 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 ++SVS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ +++ +G EG R A P TDPI+P S Sbjct: 30 SKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPIYPGGS 183
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.284e-15 Identity = 45/109 (41.28%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 254 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA--GELEY------FTDTTTLFIVEMIFIGWAEGXR 556 WFPG P LDGS PGDFGFDPLGL + PE +SEI HCRWAML G+ +PE L + W G+ Y + + T+ +E + I +AE R Sbjct: 48 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR 156
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 53/156 (33.97%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 206 RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 + VS S+ PNR + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ G L+Y + + ++ +++ +G EG R A +P DP++P S Sbjct: 43 KPVSSSSPWYGPNRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--EPLGEVVDPLYPGGS 195
BLAST of EY650337 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.191e-15 Identity = 56/160 (35.00%), Postives = 80/160 (50.00%), Query Frame = 2 Query: 200 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPIFPNNS 616 G +SV+ S + P+R L+ F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG +L + ++ ++I +G EG R A P TDPI+P + Sbjct: 50 GKKSVAASIDSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG--GPLGEVTDPIYPGGN 206 The following BLAST results are available for this feature:
BLAST of EY650337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650337 ID=EY650337; Name=EY650337; organism=Citrus sinensis; type=EST; length=888bpback to top |