EY650289

Overview
NameEY650289
Unique NameEY650289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650289 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMC (FK506-binding protein OS=Neisseria meningitidis serogroup C GN=fbp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 2
Query:  146 GPKPVAGQKVTVHCTGYGKNGDLSHKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 442
            G + V G+++TVH TG+ ++G    KF S+ D  +QP T  +G G VIKGWDEG  GM+ G   +L    +  YGA G     I P++ L FE+++L+V
Sbjct:   14 GKEAVKGKEITVHYTGWLEDGT---KFDSSLDR-RQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHG-AGGVIPPHATLIFEVELLKV 107          
BLAST of EY650289 vs. ExPASy Swiss-Prot
Match: FKB1A_NEUCR (Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neurospora crassa GN=fkr-2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 2
Query:  113 GIEKQILTPGNGPKPVA-GQKVTVHCTGYGKNGDLSHKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYG---AGGFPQWGIQPNSVLDFEIQVLQVE 445
            G++ ++   G G +    G  V VH  G   +G    KF ++ D G+ P  F +G+G VIKGWDEG++GM++GE  +L  +P  AYG    GG     I  NS L FE +++ ++
Sbjct:    8 GLQIEVQQEGQGTRETRRGDNVDVHYKGVLTSGK---KFDASYDRGE-PLNFTVGQGQVIKGWDEGLLGMKIGEKRKLTIAPHLAYGNRAVGGI----IPANSTLIFETELVGIK 114          
BLAST of EY650289 vs. ExPASy Swiss-Prot
Match: FKB39_DROME (39 kDa FK506-binding nuclear protein OS=Drosophila melanogaster GN=FK506-bp1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 2
Query:   65 KNSYQKVKNPKTEKEMGIEKQILTPG---------NGPKPVAGQKVTVHCTGYGKNGDLSHKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 442
            K    K K P  ++    + + +T G          G +   G++V+V+  G  ++   ++K + +   G+ PF F +G G VIKGWD GV GM+VG    + C P  AYGA G P   I PNS L FE+++  V
Sbjct:  227 KKEQPKAKEPAKQQPASKDPRTITGGVKIVDQVVGKGEEAKQGKRVSVYYIGRLQS---NNKTFDSLLKGK-PFKFALGGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGARGAPP-KIGPNSTLVFEVELKAV 356          
The following BLAST results are available for this feature:
BLAST of EY650289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FKBP_NEIMC4.891e-1141.41FK506-binding protein OS=Neisseria meningitidis se... [more]
FKB1A_NEUCR4.891e-1136.52Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neuro... [more]
FKB39_DROME6.388e-1134.0739 kDa FK506-binding nuclear protein OS=Drosophila... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-D06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650289 ID=EY650289; Name=EY650289; organism=Citrus sinensis; type=EST; length=606bp
CCACGCGTCCGAAAAAAAAAAACTGAAAGGAGGTAATAAATGAGCCGATT
ATCATATAACCATTAAAAACAGTTACCAGAAAGTCAAAAACCCTAAGACA
GAGAAGGAGATGGGAATAGAGAAGCAAATTTTGACCCCAGGAAACGGTCC
TAAGCCGGTTGCTGGTCAGAAGGTTACCGTCCACTGCACTGGCTACGGGA
AAAATGGCGATCTGTCTCATAAGTTCTGGAGCACAAAGGACCCTGGGCAG
CAGCCTTTTACATTCCAGATTGGCAAAGGCTCTGTTATAAAAGGATGGGA
TGAAGGTGTGATGGGAATGCAGGTGGGAGAAGTTGCTCGTCTGCGGTGCT
CCCCAGATTACGCCTATGGTGCTGGTGGATTTCCACAATGGGGGATTCAA
CCTAACTCAGTCCTGGATTTTGAGATACAAGTCCTGCAGGTAGAATAAGC
ACCTCATAAAGGCAGAAAACCATCTAGAAAATTTTATGGTTTTAAATAAA
TTGTCTTACCATGGACATGTATGTATGTTATCCTGAACTCCTGATAAATA
TCAGATGGCTATGATGGAACGATCTTTTTTTTCGACGTTTTAAAAAAAAA
AAAAAA
back to top