EY650225

Overview
NameEY650225
Unique NameEY650225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRIA_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.026e-65
Identity = 117/183 (63.93%), Postives = 140/183 (76.50%), Query Frame = 2
Query:  146 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAXWW 688
            + C A S   D VPDMGKR+LMNLLLLGA++ P      P+ +F  PP  G  AG G  AKDA+GND+  + WL TH PGDR+L +GLKGD TYL+V++D TL +YG+NAVCTHLGCVVPWN++ENKF+CPCHGSQY+  G+VVRGPAPLSLALAH +V E+G V F PWTETDFRT  A WW
Sbjct:   59 VSCSAAS---DDVPDMGKRKLMNLLLLGAIAGPVAGAGGPFVSFLVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKPGDRSLAQGLKGDATYLIVKEDGTLENYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVSVLEDGVVAFEPWTETDFRTNTAPWW 238          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRI_TRIEI (Cytochrome b6-f complex iron-sulfur subunit OS=Trichodesmium erythraeum (strain IMS101) GN=petC PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.968e-65
Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 2
Query:  182 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAXWW 688
            VP MG+RQ MNLL  G V+      L P   +F PP  G +GGG TAKDA+GNDII +++L  H  G+RTL +GLKGDPTY+V+E ++TLA YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N G+VVRGPAPLSLAL HANV + K+VF  W ETDFRTGE  WW
Sbjct:   10 VPSMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPSSGGSGGGVTAKDALGNDIIVSEFLANHNSGERTLAQGLKGDPTYVVIEGEQTLAEYGLNAVCTHLGCVVPWNGSENKFICPCHGSQYDNTGKVVRGPAPLSLALVHANVSDDKLVFTQWEETDFRTGEKPWW 178          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRIA_CHLRE (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Chlamydomonas reinhardtii GN=petC PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.530e-64
Identity = 116/198 (58.59%), Postives = 140/198 (70.71%), Query Frame = 2
Query:  101 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAXWWA 691
            PA+   + ++ +   ++  A S     VPDM KR +MNL+L G   LP   + + Y  FF PP  G  GGG  AKDA+GNDI A +WL TH  GDR+L++GLKGDPTYL+V  D T+  YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH +V E+G V F  WTETDFRTG   WWA
Sbjct:   12 PAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFFVPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVAESGLVTFSTWTETDFRTGLEPWWA 206          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRIA_VOLCA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Volvox carteri GN=petC PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.998e-64
Identity = 117/198 (59.09%), Postives = 140/198 (70.71%), Query Frame = 2
Query:  101 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAXWWA 691
            P + Q   ++ +   ++  A S     VPDM KR +MNL+LLG  SLP G + + Y  FF PP  G   GG  AKDA+GNDI A  WL TH  GDR+L++GLKGDPTYL+V  D T+  YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH +V E+G V F  W+ETDFRTG   WWA
Sbjct:   12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFFVPPSSGGGSGGQAAKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYLIVTADGTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVQEDGLVTFSTWSETDFRTGLEPWWA 206          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRIA_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.813e-64
Identity = 110/170 (64.71%), Postives = 128/170 (75.29%), Query Frame = 2
Query:  182 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAXWWA 691
            VPDMG+RQ MNLL  G V+      L P   +F PP  G AGGGTTAKD +GND+  + +L +H  GDRTL +GLKGDPTY+VVE  + +  YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+  G+VVRGPAP SLAL+HA  EN K+V  PWTETDFRTGE  WW+
Sbjct:   10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTPWTETDFRTGEEPWWS 179          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP2 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petC PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.295e-63
Identity = 112/171 (65.50%), Postives = 133/171 (77.78%), Query Frame = 2
Query:  182 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAXWWA 691
            VPD+G+RQ +NLL +G  +      L P   +F PP  G AGGG  AKDA+GNDII +D+L TH  GDR+L +GLKGDPTY+VVE D T++SYGINA+CTHLGCVVPWN+AENKF+CPCHGSQY+  G+VVRGPAPLSLAL HA V E+ K+ F  WTETDFRT EA WWA
Sbjct:   10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDYLQTHTAGDRSLAQGLKGDPTYVVVEGDNTISSYGINAICTHLGCVVPWNTAENKFMCPCHGSQYDETGKVVRGPAPLSLALVHAEVTEDDKISFTDWTETDFRTDEAPWWA 180          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRIB_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.691e-63
Identity = 119/183 (65.03%), Postives = 135/183 (73.77%), Query Frame = 2
Query:  146 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAXWW 688
            I C A S   D VPDMGKR+LMNLLLLGA++ PT     P+ +F  PP  G  AG G  AKDA GNDI    WL T  PGDR+L +GLKGD TYL+V++D TL  YG+NAVCTHLGCVVPWN +E KF+CPCHGSQY+  G+VVRGPAPLSLALAH NV E+G V F PWTETDFRT  A WW
Sbjct:   61 ISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSFLVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYLIVKEDGTLEKYGLNAVCTHLGCVVPWNQSEGKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVNVLEDGVVAFEPWTETDFRTNTAPWW 240          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRI_CYAP4 (Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.209e-63
Identity = 109/169 (64.50%), Postives = 127/169 (75.15%), Query Frame = 2
Query:  182 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAXWW 688
            VPDMG+RQ MNLL  G+ +     ML P   +F PP  G  GGG  AKDA+GNDI  +D+L  H   DR L +GLKGDPTY+VV+ D T+  YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N G+VVRGPAPLSLALAHA V + K+ F PWTETDFRTG+  WW
Sbjct:   10 VPDMGRRQFMNLLTFGSATGVALGMLYPVVRYFIPPASGGVGGGVVAKDALGNDISVSDFLAKHPANDRALAQGLKGDPTYIVVQDDHTIGDYGLNAVCTHLGCVVPWNISENKFICPCHGSQYDNTGKVVRGPAPLSLALAHAAVSDDKITFTPWTETDFRTGKEPWW 178          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRIA_ANASP (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=petC1 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.921e-63
Identity = 109/170 (64.12%), Postives = 127/170 (74.71%), Query Frame = 2
Query:  182 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAXWWA 691
            VPDMG+RQ MNLL  G V+      L P   +F PP  G AGGGTTAKD +GND+  + +L +H  GDRTL +GLKGDPTY+VVE  + +  YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+  G+VVRGPAP SLAL+HA  EN K+V   WTETDFRTGE  WW+
Sbjct:   10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTSWTETDFRTGEEPWWS 179          
BLAST of EY650225 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPW (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH7803) GN=petC PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.870e-62
Identity = 109/177 (61.58%), Postives = 131/177 (74.01%), Query Frame = 2
Query:  161 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAXWWA 691
            T +PA  VP MG+RQ MNLL  G+V+      L P   +F PP    +GGGT+AKD +GN + A+ WL+TH  GDR+L +GLKGDPTYL+VE D  + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQY+  G+VVRGPAPLSLALA+ +VEN  V    WT+TDFRTGE  WWA
Sbjct:    2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGNAVTASGWLSTHPAGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTDTDFRTGEKPWWA 178          
The following BLAST results are available for this feature:
BLAST of EY650225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
UCRIA_CYAPA4.026e-6563.93Cytochrome b6-f complex iron-sulfur subunit 1, cya... [more]
UCRI_TRIEI8.968e-6565.68Cytochrome b6-f complex iron-sulfur subunit OS=Tri... [more]
UCRIA_CHLRE1.530e-6458.59Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_VOLCA1.998e-6459.09Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_ANAVT5.813e-6464.71Cytochrome b6-f complex iron-sulfur subunit 1 OS=A... [more]
UCRI_SYNP21.295e-6365.50Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRIB_CYAPA1.691e-6365.03Cytochrome b6-f complex iron-sulfur subunit 2, cya... [more]
UCRI_CYAP42.209e-6364.50Cytochrome b6-f complex iron-sulfur subunit OS=Cya... [more]
UCRIA_ANASP4.921e-6364.12Cytochrome b6-f complex iron-sulfur subunit 1 OS=A... [more]
UCRI_SYNPW1.870e-6261.58Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-F08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650225 ID=EY650225; Name=EY650225; organism=Citrus sinensis; type=EST; length=898bp
TTACATGGCTTCCTCCTCTTCTCTCTCCTCAGCAACTCCTTCTCAGCTAT
GCTCAAGCAAGGGTGGTATGTTCTGTCCATCAAGAGCTTTTCTTGTGAAA
CCAGCAAGGACCCAGATGGTGACAAAGAATCCAATGGGAATGAAGATCAA
GTGCCAGGCTACAAGTATTCCAGCTGATAGAGTGCCTGATATGGGCAAGA
GGCAGCTCATGAATTTGCTTCTCTTGGGTGCTGTTTCTCTTCCCACTGGA
TTTATGTTGGTTCCTTATGCGACCTTCTTTGCCCCACCTGGTTTAGGAAG
TGCTGGTGGTGGTACTACTGCCAAGGATGCCATTGGCAATGACATCATTG
CCGCTGATTGGCTTAACACGCACGGCCCTGGGGACCGAACCCTCACCGAA
GGATTGAAGGGAGATCCAACCTACCTTGTTGTGGAAAAAGACAAAACACT
TGCATCATATGGAATCAATGCTGTCTGCACTCACCTTGGATGTGTGGTGC
CATGGAATTCAGCTGAGAACAAGTTCATCTGTCCCTGCCACGGATCCCAA
TACAATAACCAAGGAAGAGTTGTGAGAGGGCCTGCTCCATTGTCATTGGC
ATTGGCTCATGCCAACGTTGAAAATGGTAAGGTAGTCTTCGTTCCATGGA
CGGAAACAGATTTCAGAACTGGTGAAGCTNCATGGTGGGCTTAAACTTGT
TCCGGTGCCTGTGCTTTAATATTCAAGTTTTGGCCGGTCGGTTTGCTTTG
CCGTACTGCTTAACATACTGNTACNGAACATGCTTTATCAGAATGAAGCT
TNCACATGTAAAGCTACTTGGCTTGAATATGCTATCTTGCAATCTTGCNN
ATCTGACATTTCTCTATCCANCATTCTTGGATCTAAAAAACATCGCTA
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