EY650224

Overview
NameEY650224
Unique NameEY650224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5_CUSRE (Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 37/105 (35.24%), Postives = 60/105 (57.14%), Query Frame = 3
Query:  621 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL-------KAYHLQPNECKNNTDSGPSMFI 911
            SK+YS  EV+ H++ +DCW++I  KVYDVT ++++HPGG D +L+    D+T+ F    H++    M+D+  +GD+       K  +  P +   N D  P   I
Sbjct:    4 SKVYSLAEVSEHSQPNDCWLVIGGKVYDVTKFLDDHPGGADVLLSSTAKDATDDFEDIGHSSSARAMMDEMCVGDIDSSTIPTKTSYTPPKQPLYNQDKTPQFII 108          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL--KAYHLQPNECKNNTDSGPSMFIL 914
            K + S+   N  +K+YS  EV  HN  D CWII+   +YD T ++ +HPGG D+IL +AG D TE F    H+ +   M++D+ IG+L    Y    +   N+     ++F L
Sbjct:  530 KKSVSTPFMNTTAKMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEA-IHSDKAKKMLEDYRIGELITTGYSSDSSSPNNSVHGSSAVFSL 641          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = 3
Query:  582 SKSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKAYHLQPNE-----CKNNT-DSGPSMFILPL 920
            S S R+   S+ A   Y  +EV   N  ++ W++I  +VYD+T ++ EHPGG + +L  AG D+TE F    H+    +M+  +YIGD+    L+P +      KNN+  S  + +I+P+
Sbjct:    7 SGSGRNGQGSDPAVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPKDGDKDPSKNNSCQSSWAYWIVPI 126          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKAYHLQPNECKNNT---DSGPSMFILPL 920
            K + S+   N ASK+YS  EV  HN  D  WII+   +YD + ++++HPGG D+IL +AG D TE F    H+ +   +++DF IG+L       +   N++    S  S F+ P+
Sbjct:  524 KKSISTPFMNTASKMYSMSEVRKHNSSDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEF-DAIHSDKAKKLLEDFRIGELITTGYTSDSSPNSSVHGSSSISSFLAPI 638          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKAYHLQPNECKNNTDSGPSMFILPL 920
            K + SS   N  SK Y+  EV  HN  D  WII+   VYD T ++++HPGG D+IL +AG D TE F    H+ +   M++D+ IG+L       +   +N     S   +PL
Sbjct:  505 KKSVSSPFMNTTSKTYTMSEVRRHNNADSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEA-IHSDKAKQMLEDYRIGELTTTCYNSDSSSSNPSVHGSSDTIPL 616          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 41/98 (41.84%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL--KAYHLQPN 869
            K + SS   N ASK+YS  EV  HN  D  WII+   +YD T ++++HPGG D+IL +AG D TE F    H+ +   +++D+ IG+L    Y   PN
Sbjct:  533 KKSVSSPFMNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEA-IHSDKAKKLLEDYRIGELITTGYDSSPN 629          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 32/82 (39.02%), Postives = 54/82 (65.85%), Query Frame = 3
Query:  606 NSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLK 848
            +++  + IY+ +EV  H   DD W+I+  KVY++++Y++EHPGG + IL  AG D+TE F    H+    ++++  YIG+LK
Sbjct:    3 DTDTTTTIYTHEEVAQHTTHDDLWVILNGKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLK 84          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL-KAYHLQPNECKNNTDSGPSMFI 911
            K + S+   N ASK++S  EV  H+  D  WII+   VYD T ++++HPGG D+IL +AG D TE F    H+ +   M++D+ IG+L    +   +   NN+  G S FI
Sbjct:  501 KKSVSTPFMNTASKMFSVSEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEF-DAIHSDKAKKMLEDYRIGELITTGYTSADSSPNNSVHGNSEFI 610          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.384e-12
Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL 845
            K T S+   N  SK+YS  EV  HN  D  WI++   VY+ T ++++HPGG D+IL +AG D TE F    H+ +   +++DF IG+L
Sbjct:  539 KRTASTPFMNTTSKMYSMSEVKKHNTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEF-DAIHSDKAKRLLEDFRIGEL 625          
BLAST of EY650224 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.384e-12
Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 3
Query:  585 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDL 845
            K + S+   N ASK+YS  EV  H+  D  WII+   +YD T ++++HPGG D+IL +AG D TE F    H+ +   +++DF IG+L
Sbjct:  519 KKSISTPFMNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEF-DAIHSDKAKKLLEDFRIGEL 605          
The following BLAST results are available for this feature:
BLAST of EY650224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CYB5_CUSRE4.803e-1335.24Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1[more]
NIA2_ARATH6.273e-1336.28Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
CYB5B_RAT6.273e-1334.17Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
NIA_SOLLC8.193e-1336.21Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NIA2_SOYBN8.193e-1337.17Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NIA1_ARATH8.193e-1341.84Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
CYB5_CANTR8.193e-1339.02Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
NIA2_PHAVU1.398e-1238.74Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
NIA_SPIOL2.384e-1242.05Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA2_TOBAC2.384e-1242.05Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-F07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650224 ID=EY650224; Name=EY650224; organism=Citrus sinensis; type=EST; length=921bp
CCGGNATTACCCCCTCGACCCACGCGTCCGGTACTTTTCTAGGCCAAGTA
GCAGTAGATGTACCGGCCTAGAACCAAGTGAAAACAAATAACACCGCGGC
TGTGCCGGAGAGGGAATACTAACAGAAGTAAAATCTATCCGGCAAATCCG
ATTCGAATCTCTCTACTTAATCTGATCCATTGCTGTTTTTATAATTCACA
GGTAACTAATCTGACTTGTTTTCTCTATCGCGCCATTCATCAAGTTAGTT
ACTTCTTTAGAGCTACTTACTGCACTTGTTTGCTTTAAATATTCTTTACA
AGAGCAAAGTGACTAGTAGAAAGCACTCTTTTAGAAAAGAACTGAAATTT
GGCTTATTATCTGTAAATCTATTGAAAGCAGAGCACGTAGCAGCTGGGTA
GTGGATTTTGAAAGATGGTTATAATCGTGGCCGCATTAATTTTAGGTGCC
ATTTTGGGAGTCTTTATTTTCATCCCACGACACCCTGCATCTGGTAATCT
TTACATTTCAAATTAAAGGATTTGAAAGTGTTTATTTAATTGTGTTTGAT
ATTTTTTCTTCTGGGTGTAAATGCAGGCCATTCAAAAAGTACTCGCTCAA
GTGCTAACAGTAACAAGGCATCAAAAATCTACAGCAAAGATGAAGTAACA
TTGCATAATAAGAGAGATGACTGTTGGATCATTATCAAGAACAAGGTGTA
TGATGTTACCTCATATGTAGAGGAACACCCAGGTGGCGATGCTATCCTAG
CACATGCTGGTGATGATTCAACTGAAGGATTTTATGGGCCACAGCATGCA
ACCCGAGTCTTTGACATGATAGATGACTTTTACATTGGGGATCTGAAAGC
ATATCACTTGCAGCCAAACGAGTGTAAAAATAACACAGACTCTGGACCTT
CCATGTTTATTCTTCCATTGN
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