EY650186

Overview
NameEY650186
Unique NameEY650186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 41/136 (30.15%), Postives = 61/136 (44.85%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSA--CGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLWLE-----------------------DSYDYQLTYQDREGDWLIAKDVPW 728
            VVGWPP++N+RK               N  A  A+ G     G  +   +YVKV M+G    RK+DL +Y S+E L+  L  MF  ++                           +Y LTY+D++ DW++  D+PW
Sbjct:  119 VVGWPPVRNYRK---------------NTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPW 239          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVV-ANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMF--------GLWLEDSYDYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            VVGWPPI+++RK        +   ++K+N+  V A  G          +YVKV M+G    RK+DL  Y +++ ++  L  MF        G   +   +Y LTY+D++GDW++  DVPW      C
Sbjct:  124 VVGWPPIRSYRKNT------MATNQIKSNKEDVDAKQGQGF-------LYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSC 237          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 39/138 (28.26%), Postives = 62/138 (44.93%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLW--------------------LEDSYDYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            VVGWPP++++RK +   Q           +      G   G   + + +VKV M+G    RK+DL +Y S+  L+  L  MF  +                    L +  +Y  TY+D++GDW++  DVPW    + C
Sbjct:  121 VVGWPPVRSYRKNILAVQ-------ADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESC 251          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVAN--NGSACGG---RQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLWLEDSY----------------DYQLTYQDREGDWLIAKDVPW 728
            +VGWPP++ +RK L   +       + N   + ++  +GS C     R S++M+VKV +EG A+ RKIDL  + S+++L+  L  MF  +L D                   Y L Y+D EGD ++  DVPW
Sbjct:   93 LVGWPPVRAFRKNLSTPKP-ADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYVLVYEDNEGDRMLVGDVPW 223          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.470e-11
Identity = 39/126 (30.95%), Postives = 58/126 (46.03%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLWLEDSY--------DYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            +VGWPP++++RK               NN     +     G       YVKV M+G    RKIDLT+Y  +  L  +L  MF   + + +        D+  TY+D++GDW++  DVPW      C
Sbjct:   63 IVGWPPVRSYRK---------------NNVQTKKSESEGQGN------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSC 167          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.470e-11
Identity = 43/138 (31.16%), Postives = 67/138 (48.55%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGG------RQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMF-GL-------------------WLEDSYDYQLTYQDREGDWLIAKDVPWR 731
            VVGWPP++++RK L        G     +  V   N            ++   M+VK+ M GV I RK+DL+ ++S+E L+ T+  +F GL                    L+ + +Y LTY+D EGD ++  DVPW+
Sbjct:   97 VVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQ 234          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 42/133 (31.58%), Postives = 67/133 (50.38%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNN-QAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMF-GL-------------------WLEDSYDYQLTYQDREGDWLIAKDVPWR 731
            VVGWPP++++RK L        G    +  Q   +++G      +   M+VK+ M+GV I RK+DL  Y+S+E L+  +  +F GL                    L+   ++ LTY+D EGD ++  DVPW+
Sbjct:  104 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQ 236          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 41/141 (29.08%), Postives = 64/141 (45.39%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLW-----------------------LEDSYDYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            VVGWPPI+++RK           G+         ++G A     S  +YVKV M+G    RK+DL +Y +++ L+  L  MF  +                       L++  +  LTY+D++ DW++  DVPWR     C
Sbjct:  109 VVGWPPIRSYRKNTMAMSQPALKGK---------DDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSC 240          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA20_ORYSJ (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica GN=IAA20 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 45/123 (36.59%), Postives = 59/123 (47.97%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMF-GLWLEDSYD------YQLTYQDREGDWLIAKDVPWRTSFK 743
            +VGWPP+K   ++                          CGG      YVKVKMEG+AI RK+DL++  S+  L +TL  MF     ED +D      Y +TY+D EGDW+   DVPW    K
Sbjct:   79 LVGWPPVKCLHRR----------------------RDGGCGGG-----YVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAK 174          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 45/142 (31.69%), Postives = 66/142 (46.48%), Query Frame = 3
Query:  345 NSSFGSNKTVDDEDGVHVVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFG-------LWLEDSYDYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            NSS G      + +   VVGWPP+ ++RK              KN+     N G       ++ MYVKV M+G    RKIDL L+  +  L   L  +FG       L   D+ ++   Y+D++GDW++  DVPW    + C
Sbjct:   48 NSSSGGGDRKMETNKSQVVGWPPVCSYRK--------------KNSM----NEG-------ASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESC 164          
The following BLAST results are available for this feature:
BLAST of EY650186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
IAA5_ORYSI8.616e-1230.15Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA3_ORYSJ8.616e-1233.07Auxin-responsive protein IAA3 OS=Oryza sativa subs... [more]
IAA30_ORYSJ1.125e-1128.26Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA25_ORYSJ1.125e-1133.33Auxin-responsive protein IAA25 OS=Oryza sativa sub... [more]
IAA4_ARATH1.470e-1130.95Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]
IAA18_ARATH1.470e-1131.16Auxin-responsive protein IAA18 OS=Arabidopsis thal... [more]
IAA26_ARATH1.919e-1131.58Auxin-responsive protein IAA26 OS=Arabidopsis thal... [more]
IAA21_ORYSJ2.507e-1129.08Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]
IAA20_ORYSJ2.507e-1136.59Auxin-responsive protein IAA20 OS=Oryza sativa sub... [more]
AUX22_SOYBN2.507e-1131.69Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650186 ID=EY650186; Name=EY650186; organism=Citrus sinensis; type=EST; length=887bp
CGAATGAAAGTAGGATGATGGATTTTCAATAGAGCGGCGCTCTTCCAAGC
ATTGCTACTACTCATCATGTCAGAGGCTTCGAATTCGACCTCAATAACAG
CTACGTGTACGAGCCCAAGGACTCGGACCCATCTTCATGGAACATCAACA
GTTACTTTGGCTCCTTATCTTCTGTGCCTGGCAAATGCAGGGCTACTAAT
AGTAGTAACGGCAACAAGAAACGCAGCTGCGATGATGCCTTCGACTATGA
GCAAGTCAGAGCGGTGCCTCCTCGAACCCTGCCTCTTTTCAACTGGAACA
GCAGGTATCCTGATGATGAAGATGATCCCAGAGACCTCGACAACAACTCT
TCCTTCGGCAGTAACAAGACGGTTGATGATGAAGATGGTGTACATGTGGT
TGGGTGGCCGCCTATTAAGAACTGGAGGAAGAAGCTTTGTCACCAACAAC
ATCATATTCCTGGCGGCCGAGTCAAGAACAATCAGGCGGTGGTGGCAAAC
AATGGCTCTGCTTGTGGCGGGAGGCAGTCGAATTCCATGTACGTGAAGGT
GAAAATGGAGGGCGTAGCCATTGCCAGGAAAATTGACTTGACCCTTTACG
ATTCTTTTGAGACGCTCACAAACACCTTGATCGGCATGTTTGGCCTATGG
CTCGAAGATTCCTACGATTATCAACTCACATATCAAGATAGAGAAGGAGA
TTGGCTTATTGCTAAAGATGTTCCCTGGAGAACTTCATTCAAACAGTGCA
ACGCCTCAATTTGCCACGAGCGGGGGGTGATTCATCAATCGATGATCATT
ATCACATGGAAATGCGCTGCCCCTATCACCTACTTAATTGGATCCTTGAA
GTCCACCCATCCTCTCGCTTCTTCTTTTTTAACGGTT
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