EY650186

Overview
NameEY650186
Unique NameEY650186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  348 SSFGSNKTVDDEDGVHVVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLWLEDSYD----YQLTYQDREGDWLIAKDVPW 728
            +SF SN  V+      VVGWPP+++ R+ L  Q        +K  ++            +   +YVK+ MEGV I RK++L+ Y++++ L++ +  +F    +DS+D    Y L Y+D EGD ++  DVPW
Sbjct:   36 TSFLSNNRVEVAP---VVGWPPVRSSRRNLTAQLKE----EMKKKES-----------DEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFS--KKDSWDLNRQYTLVYEDTEGDKVLVGDVPW 146          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA22_ORYSJ (Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica GN=IAA22 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNG-----SACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLWLEDSY----------------DYQLTYQDREGDWLIAKDVPW 728
            +VGWPP++ +RK L   +       + N     ++ G     +A   R S++M+VKV +EG A+ RKIDL  + S+++L+  L  MF  +L D                   Y L Y+D EGD ++  DVPW
Sbjct:   41 LVGWPPVRTFRKNLSTPKP-ADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDNEGDRMLVGDVPW 171          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLW------LEDSY---DYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            VVGWPPI+++RK             +  NQ + ++   A   +    +YVKV M+G    RK+DL  Y +++ L+  L  MF  +      L +S    +Y LTY+D++GDW++  DVPW      C
Sbjct:  117 VVGWPPIRSYRKNT-----------MATNQ-LKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSC 231          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 42/126 (33.33%), Postives = 59/126 (46.83%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMF----GLWLE-DSY---DYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            +VGWPP++++RK               NN     N        +   +YVKV M+G    RKIDL+ Y  +  L   L  MF    G + E D Y   D+  TY+D++GDW++  DVPW      C
Sbjct:   65 IVGWPPVRSYRK---------------NNIQSKKNESE----HEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTC 171          
BLAST of EY650186 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11
Identity = 39/126 (30.95%), Postives = 58/126 (46.03%), Query Frame = 3
Query:  396 VVGWPPIKNWRKKLCHQQHHIPGGRVKNNQAVVANNGSACGGRQSNSMYVKVKMEGVAIARKIDLTLYDSFETLTNTLIGMFGLWLED--------SYDYQLTYQDREGDWLIAKDVPWRTSFKQC 749
            +VGWPPI+++RK   H+                    +  GG     ++VKV M+G    RKIDL +Y  +  L   L  MF L + +          +Y  TY+D++GDW++  DVPW      C
Sbjct:   71 IVGWPPIRSYRKNSLHE--------------------ADVGG-----IFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSC 171          
The following BLAST results are available for this feature:
BLAST of EY650186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
IAA28_ARATH3.274e-1132.82Auxin-responsive protein IAA28 OS=Arabidopsis thal... [more]
IAA22_ORYSJ3.274e-1132.58Auxin-responsive protein IAA22 OS=Oryza sativa sub... [more]
IAA17_ORYSJ3.274e-1133.07Auxin-responsive protein IAA17 OS=Oryza sativa sub... [more]
IAA3_ARATH7.294e-1133.33Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
IAA4_PEA9.526e-1130.95Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650186 ID=EY650186; Name=EY650186; organism=Citrus sinensis; type=EST; length=887bp
CGAATGAAAGTAGGATGATGGATTTTCAATAGAGCGGCGCTCTTCCAAGC
ATTGCTACTACTCATCATGTCAGAGGCTTCGAATTCGACCTCAATAACAG
CTACGTGTACGAGCCCAAGGACTCGGACCCATCTTCATGGAACATCAACA
GTTACTTTGGCTCCTTATCTTCTGTGCCTGGCAAATGCAGGGCTACTAAT
AGTAGTAACGGCAACAAGAAACGCAGCTGCGATGATGCCTTCGACTATGA
GCAAGTCAGAGCGGTGCCTCCTCGAACCCTGCCTCTTTTCAACTGGAACA
GCAGGTATCCTGATGATGAAGATGATCCCAGAGACCTCGACAACAACTCT
TCCTTCGGCAGTAACAAGACGGTTGATGATGAAGATGGTGTACATGTGGT
TGGGTGGCCGCCTATTAAGAACTGGAGGAAGAAGCTTTGTCACCAACAAC
ATCATATTCCTGGCGGCCGAGTCAAGAACAATCAGGCGGTGGTGGCAAAC
AATGGCTCTGCTTGTGGCGGGAGGCAGTCGAATTCCATGTACGTGAAGGT
GAAAATGGAGGGCGTAGCCATTGCCAGGAAAATTGACTTGACCCTTTACG
ATTCTTTTGAGACGCTCACAAACACCTTGATCGGCATGTTTGGCCTATGG
CTCGAAGATTCCTACGATTATCAACTCACATATCAAGATAGAGAAGGAGA
TTGGCTTATTGCTAAAGATGTTCCCTGGAGAACTTCATTCAAACAGTGCA
ACGCCTCAATTTGCCACGAGCGGGGGGTGATTCATCAATCGATGATCATT
ATCACATGGAAATGCGCTGCCCCTATCACCTACTTAATTGGATCCTTGAA
GTCCACCCATCCTCTCGCTTCTTCTTTTTTAACGGTT
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