EY650182

Overview
NameEY650182
Unique NameEY650182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.313e-50
Identity = 108/208 (51.92%), Postives = 141/208 (67.79%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR  LR  +  K+  +EVVA+ND     + A+++ KYDST G F+  V+     G+ +DGK IQV   R+P N+PWG  G D V+E TGVF  +E A  H++ GAKKV+I+AP  GD P +VVGVN DAYKPD  +ISNASCTTNCLAP  K ++ K GII+G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    3 IKVGINGFGRIGRIVLR--NALKNPEVEVVAVNDPFIDTEYAAYMFKYDSTHGRFKGKVE-AKDGGLIIDGKHIQVFGERDPSNIPWGKAGADYVVESTGVFTGKEAASAHLKGGAKKVIISAPS-GDAPMFVVGVNLDAYKPDMTVISNASCTTNCLAPLAKVVNDKYGIIEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 1.444e-50
Identity = 99/206 (48.06%), Postives = 136/206 (66.02%), Query Frame = 2
Query:  266 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            K+ INGFGRIGRN  R      +S +EVVAIND    K  +HLLKYD+  G   A+V     + I V+GK I+V++ R+P  LPW D G+++V+E TG F  +  A KH+    KKV+I+AP   +  T V+GVN + Y   +  ++SNASCTTNCLAPF K L++K G+ +G MTT HSYT DQ++LD  H+D +R +AAA N++
Sbjct:    3 KIGINGFGRIGRNVFRA--ALNNSEVEVVAINDLTDAKTLAHLLKYDTVHGTLNAEVS-ANENSIVVNGKEIKVIAERDPAQLPWSDYGVEVVVESTGRFTKKSDAEKHLGGSVKKVIISAPASDEDITVVMGVNHEQYDAANHNVVSNASCTTNCLAPFAKVLNEKFGVKRGMMTTIHSYTNDQQILDLPHKDLRRARAAAENMI 205          

HSP 2 Score: 27.335 bits (59), Expect = 1.444e-50
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PTSTGA KAVALVL
Sbjct:  206 PTSTGAAKAVALVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 1.883e-50
Identity = 108/212 (50.94%), Postives = 140/212 (66.04%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFV----DREGAGKHIQ-AGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            +K+AINGFGRIGRN  +    R    +++VAIND    K  +HLLKYDST G++   V+    DG I VDG+ I++++ R+P NLPW  LGID+VIE TGVF     D+ G   H+  AGAKKV++T P K +I T V+GVN      D   +SNASCTTNCLAP  K L +  GI +G MTT H+YT DQR+LD  H D +R +AAAL+I+
Sbjct:    1 MKLAINGFGRIGRNVFKIAFERG---IDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVE--SRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSII 207          

HSP 2 Score: 25.7942 bits (55), Expect = 1.883e-50
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PTSTGA KAV LVL
Sbjct:  208 PTSTGAAKAVGLVL 221          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.519e-50
Identity = 110/208 (52.88%), Postives = 138/208 (66.35%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +K+ INGFGRIGR  LR   GRKD  +EVVA+ND       A+++ KYDST G ++ +V   G D + +DG  I+V   R+P N+PWG  G+D VIE TGVF   EGA KHI AGAKKV+ITAP   D P +VVGVN D Y PD  IISNASCTTNCLAP  K ++   GI +G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    3 IKIGINGFGRIGRLVLRVALGRKD--IEVVAVNDPFIAPDYAAYMFKYDSTHGRYKGEVTASGDD-LVIDGHKIKVFQERDPANIPWGKSGVDYVIESTGVFTKVEGAQKHIDAGAKKVIITAPS-ADAPMFVVGVNEDKYTPDLKIISNASCTTNCLAPLAKVVNDTFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.084e-50
Identity = 103/206 (50.00%), Postives = 135/206 (65.53%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            +KVAINGFGRIGRN LR       + +EVVAIND G V+  +HL ++DS  G F  +VK  G D I V    I+V + RNP  LP  +LG+D+ +E TG+F  R+ A  H+ AGAK+VL++AP  G   T V GVN +    +  ++SNASCTTNCLAP  K L+  VGI KG MTT H+YTGDQ  LD  H+D  R +AAA++++
Sbjct:    3 VKVAINGFGRIGRNVLRAIIESGRTDIEVVAINDLGPVETNAHLFRFDSVHGRFPGEVKVAG-DTIDVGRGPIKVTAVRNPAELPHKELGVDIALECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNEHLVVSNASCTTNCLAPVAKVLNDAVGIEKGFMTTIHAYTGDQPTLDTMHKDLYRARAAAMSMI 207          

HSP 2 Score: 25.7942 bits (55), Expect = 7.084e-50
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PTSTGA KAV LVL
Sbjct:  208 PTSTGAAKAVGLVL 221          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 7.085e-50
Identity = 105/207 (50.72%), Postives = 134/207 (64.73%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R  H R    +EV  IND    K  +HLLKYDS    F  +V       + VDGK I+  + ++P  +PW + G+ +VIE TGVF D + A  H++ GAKKV+ITAP KG+  T V+GVN +AY P    IISNASCTTN LAP +K L++  G+ K  MTT HSYT DQRLLD  H+D +R +AAA+NI+
Sbjct:    1 MKVGINGFGRIGRQVFRILHSRG---VEVALINDLTDNKTLAHLLKYDSIYHRFPGEVA-YDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINII 203          

HSP 2 Score: 24.6386 bits (52), Expect = 7.085e-50
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PT+TGA KA ALVL
Sbjct:  204 PTTTGAAKATALVL 217          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.514e-50
Identity = 109/208 (52.40%), Postives = 134/208 (64.42%), Query Frame = 2
Query:  266 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDG--ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            ++AINGFGRIGRN LR    R DS L+VVA+ND       + LL YD+T G      +PV  +G  + VDG+ I V + R P NLPW +LG+D+V+E TG F   + A  H+ AGAKKVL++AP  G   T   GVN DAY PD   I+SNASCTTN LAP  K LD   GI  G MTT H+YT +Q L D  HRDP+R +AAA+NIV
Sbjct:    3 RIAINGFGRIGRNVLRALLER-DSDLDVVAVNDLTEPATLARLLAYDTTSGRLG---RPVTVEGNVLVVDGRRITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPDLHTIVSNASCTTNALAPLAKVLDDLAGIEHGFMTTVHAYTQEQNLQDGPHRDPRRARAAAVNIV 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.474e-49
Identity = 104/206 (50.49%), Postives = 133/206 (64.56%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            ++VAINGFGRIGRN LR       + +EVVAIND G V+  +HLL++DS  G F A V   G D I V    I+V + RNP  LPW   G+D+ +E TG+F  +E A  H+Q GAK+VL++AP  G   T V GVN      D+ ++SNASCTTNCL+P  K L   +GI KG MTT HSYTGDQ  LD  H+D  R +AAAL+++
Sbjct:    3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAINDLGQVETNAHLLRFDSVHGRFPAKVTS-GDDWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVNHATLTADDLVVSNASCTTNCLSPVAKVLHDAIGIAKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMI 205          

HSP 2 Score: 25.7942 bits (55), Expect = 3.474e-49
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PTSTGA KAV LVL
Sbjct:  206 PTSTGAAKAVGLVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_BACCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus coagulans GN=gap PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.606e-48
Identity = 110/209 (52.63%), Postives = 140/209 (66.99%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLD-ASHRDPQRXKAAALNIV 880
            +KV INGFGRIGRN  R     K+  +EVVA+ND T      +HLLKYDS  G  +A+V  V  DG+SV+GK I V + RNP NL WG++G+D+V+E TG F  RE A KH++AGAKKV+I+AP K +  T V+GVN D Y  D   +ISNASCTT CLA F + L Q  G +   MTT HSYT  QR+LD A+H D +  +AAA +I+
Sbjct:    3 VKVGINGFGRIGRNVFRA--AVKNPDIEVVAVNDLTANADGLAHLLKYDSVHGRLDAEV--VVNDGVSVNGKEIIVKAERNPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKVENITVVMGVNQDKYDADAHHVISNASCTTICLAAFARVLHQIFGEVSRMMTTAHSYTNIQRILDAATHADLRGARAAAESII 207          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.893e-48
Identity = 99/208 (47.60%), Postives = 140/208 (67.31%), Query Frame = 2
Query:  260 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            K+KVAINGFGRIGR   R      D  ++VVAIN +   +  +HL+KYD+  G ++ +V   G D + V+GK + ++++R+P  LPW +  ID+V+E TG F  ++ A  HI+AGAKKV++TAPGK +  T V+GVN D +  +   IISNASCTTNCLAP VK LD++ GI  G MTT H+YT DQ+ +D  H+D +R +A   +I+
Sbjct:    2 KVKVAINGFGRIGRMVFR--KAMLDDQIQVVAINASYSAETLAHLIKYDTIHGRYDKEVV-AGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKFNAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAERHVIISNASCTTNCLAPVVKVLDEEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARACGESII 206          

HSP 2 Score: 26.5646 bits (57), Expect = 2.893e-48
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  880 PTSTGAXKAVALVLQH 927
            PT+TGA KA++LVL H
Sbjct:  207 PTTTGAAKALSLVLPH 222          
The following BLAST results are available for this feature:
BLAST of EY650182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_YARLI1.313e-5051.92Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
G3P1_BACCE1.444e-5048.06Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]
G3P_BORBU1.883e-5050.94Glyceraldehyde-3-phosphate dehydrogenase OS=Borrel... [more]
G3P_CANAL6.519e-5052.88Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
G3P_XANFL7.084e-5050.00Glyceraldehyde-3-phosphate dehydrogenase OS=Xantho... [more]
G3P_THEAQ7.085e-5050.72Glyceraldehyde-3-phosphate dehydrogenase OS=Thermu... [more]
G3P_STRAU8.514e-5052.40Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P2_RHOSH3.474e-4950.49Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhod... [more]
G3P_BACCO1.606e-4852.63Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P2_BACSU2.893e-4847.60Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Baci... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650182 ID=EY650182; Name=EY650182; organism=Citrus sinensis; type=EST; length=928bp
AGCTCATCTTAGCGACCACTGCTTGCTCTTGCTCCGCATCATCCAGCAAA
TACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAATCAGCTCTTCAG
GGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGCAACTCTGCAAG
CCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTCAGTCATTGCTC
TCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACAGGAAGGTTGCT
GCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGTAGAATTGGTAG
GAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCCACTTGAAGTCG
TTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTCACCTCCTCAAG
TACGACTCCACCCTTGGCATCTTTGAAGCCGATGTTAAACCAGTTGGTAC
TGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGTTTCTAACCGCA
ACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATCGACCTTGTGATTGAA
GGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTCAGGC
TGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATCCCAA
CCTACGTTGTTGGTGTCAATGCGGATGCTTACAAGCCAGATGAGCCCATC
ATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCAAGGG
TCTTGACCAGAAAGTTGGCATTATCAAGGGAACCATGACCACCACACACT
CGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTGACCCTCAG
CGTGNCAAAGCAGCTGCACTCAACATTGTCCAACATCAACTGGTGCGGNC
AAAGCTGTGGCCCTTGTCCTCCAGCACT
back to top