EY650182

Overview
NameEY650182
Unique NameEY650182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.544e-33
Identity = 78/186 (41.94%), Postives = 113/186 (60.75%), Query Frame = 2
Query:  332 DSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            ++ L+VVAIND    +    ++ KYDS  G F   V+    DG + ++ K I V   R+PV +PWG  G + ++E TGVF   E A  H++ GAKK++I+AP   D P +V GVN D Y P   ++SNASCTTNCLAP  K ++ K GI++G MTT H+ T  Q+ +D  S +D +  ++   NI+
Sbjct:    2 ETDLDVVAINDPFIDLAYMVYMFKYDSVHGRFSGSVET--KDGKLWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPS-ADAPMFVCGVNLDKYDPKFQVVSNASCTTNCLAPLAKVVNDKFGIVEGLMTTVHATTATQKTVDGPSAKDWRGGRSVNNNII 184          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.233e-33
Identity = 85/204 (41.67%), Postives = 119/204 (58.33%), Query Frame = 2
Query:  275 INGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQ-ASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR-DPQRXKAAALNIV 880
            INGFGRIGR   R     KD   +++ +N         ++  KYDS  G ++ DV   G D + +DG+ +     R+P ++ W   G++ + E TGVF+  E A  HI AG KKV+ +AP K D  T V+GVNA+ YK     IS ASCTTN LAP VK ++ K GI +G MTT H+ T  Q ++D+S R D +  +AA+ NI+
Sbjct:   53 INGFGRIGRLVARIMI--KDPETKLLQVNAGSATPDYMAYQFKYDSIHGRYQGDVVVDGDD-LVIDGQRVITTRARDPKDIGWAKTGVEYLCESTGVFLTAEKAQPHIDAGVKKVIFSAPAKDDSLTVVMGVNAEDYKGQTDFISCASCTTNGLAPLVKCINDKWGIEEGLMTTIHAMTATQAVVDSSSRKDWRGGRAASGNII 253          

HSP 2 Score: 22.7126 bits (47), Expect = 7.233e-33
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAVA V+
Sbjct:  254 PSSTGAAKAVAKVI 267          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.248e-33
Identity = 82/209 (39.23%), Postives = 120/209 (57.42%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +++ INGFGRIGR  LR         ++VVAIND     +   ++LKYD+  G F+  +     D I+V+G  I V  +  P  +PWG   +D+V+E TG F  ++ A  HI  G K+V+I+AP   D P +V G N + Y P    +ISNASCTTNCLAP    +++K GI +G MTT H+ T  Q  +D  S +D +  ++   N++
Sbjct:    3 IRLGINGFGRIGRMALRA--SLNIDGVQVVAINDPFTDCEYMEYMLKYDTVHGRFDGTIAH-SEDSITVNGNKISVFKSMKPEEIPWGKTQVDIVLECTGRFTTKKDAELHITGGCKRVIISAP-SADAPMFVCGCNLETYDPSTMKVISNASCTTNCLAPLAMVVNKKFGIKEGLMTTVHAVTATQLPVDGPSKKDWRGGRSCGANVI 207          

HSP 2 Score: 21.9422 bits (45), Expect = 7.248e-33
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  208 PSSTGAAKAVGKVL 221          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.457e-33
Identity = 76/185 (41.08%), Postives = 115/185 (62.16%), Query Frame = 2
Query:  332 DSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            D  ++V+A++D    ++   ++ KYDS  G F+  V+ +    + +DG  I V   R+P N+ WG +G D V+E +GVF   + A  H++ GAKKV+I+AP   D P +VVGVN DAY     +ISNASCTTNCLAP  K ++ K GI++G M+T H+ T  Q+ +D  S++D +  +A   NI+
Sbjct:    3 DPRVKVLAVSDPFIDLQYMVYMFKYDSVHGRFKGTVE-IKDGKLVIDGHPITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPS-ADAPMFVVGVNLDAYDSKYTVISNASCTTNCLAPLAKVINDKFGIVEGLMSTIHATTATQKTVDGPSNKDWRGGRAVNGNII 185          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.250e-31
Identity = 71/167 (42.51%), Postives = 104/167 (62.28%), Query Frame = 2
Query:  386 SHLLKYDSTLGIFEA-DVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +++ KYD+  G ++  +VK   +  +    K + V   RNP  +PW   G + V+E TGVF D++ A  HI+ GAKKV+I+AP K D P +V GVN   YK D  I+SNASCTTNC AP  K ++ + GI++G MTT H+ T  Q+ +D  S +D +  +AA+ NI+
Sbjct:   12 TYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHIKGGAKKVIISAPSK-DAPMFVCGVNEKEYKSDIDIVSNASCTTNCPAPLAKVINDRFGIVEGLMTTVHAMTATQKTVDGPSSKDWRGGRAASFNII 177          

HSP 2 Score: 21.9422 bits (45), Expect = 2.250e-31
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  178 PSSTGAAKAVGKVL 191          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.510e-30
Identity = 89/215 (41.40%), Postives = 130/215 (60.47%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASH-RDPQRXKAAALNIV 880
            +K+ INGFGRIGR  LR    R D+   LEV+ IND    +  ++LL++DST G+   +V+         +GK+I + S   PV     DL G+ ++IE +G F++ +    ++  GAKKVL++AP  G+      PT V GVN   Y+ ++ I+SNASCTTN +AP    LD+   I +G +TT HSYT DQ+L+D +H  D +R +AAA NI+
Sbjct:    1 MKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDPANWEILAYLLEHDSTHGLLNKEVR-------YSNGKLI-IGSLEIPVFNSIKDLKGVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ-NQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.278e-29
Identity = 86/215 (40.00%), Postives = 126/215 (58.60%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASH-RDPQRXKAAALNIV 880
            +K+ INGFGRIGR  LR    R D+   LEV+ IND    +  ++LL++DS  G+   +V+             + + S   PV     DL G+D++IE +G F++ +    ++  GAKKVL++AP  G+      PT V GVN   Y+ ++ I+SNASCTTN +AP    LD+   I +G +TT HSYT DQ+L+D +H  D +R +AAA NI+
Sbjct:    1 MKIFINGFGRIGRCVLRAILERNDTNPKLEVIGINDPANWEILAYLLEHDSVHGLLPKEVR--------YSNYKLIIGSLEIPVFNSIKDLKGVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFCYQ-NQAIVSNASCTTNAIAPICAILDKAFKIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_MELGA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Meleagris gallopavo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.305e-20
Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 2
Query:  536 DLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQR-XKAAALNIV 880
            + V+E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN + Y     I+SNA CTTNCLAP  K +    GI++G MTT H+ T  Q+ +D       R  + AA NI+
Sbjct:    2 EYVVESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNALCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPFGKLWRDGRGAAQNII 116          

HSP 2 Score: 20.7866 bits (42), Expect = 1.305e-20
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P STGA KAV  V+
Sbjct:  117 PASTGAAKAVGKVI 130          
The following BLAST results are available for this feature:
BLAST of EY650182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_AMAMU5.544e-3341.94Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3PA_GUITH7.233e-3341.67Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3P1_GIALA7.248e-3339.23Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giar... [more]
G3P_LACDT9.457e-3341.08Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3PC_HORVU2.250e-3142.51Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_HELPJ1.510e-3041.40Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]
G3P_HELPY1.278e-2940.00Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]
G3P_MELGA1.305e-2044.83Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650182 ID=EY650182; Name=EY650182; organism=Citrus sinensis; type=EST; length=928bp
AGCTCATCTTAGCGACCACTGCTTGCTCTTGCTCCGCATCATCCAGCAAA
TACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAATCAGCTCTTCAG
GGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGCAACTCTGCAAG
CCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTCAGTCATTGCTC
TCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACAGGAAGGTTGCT
GCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGTAGAATTGGTAG
GAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCCACTTGAAGTCG
TTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTCACCTCCTCAAG
TACGACTCCACCCTTGGCATCTTTGAAGCCGATGTTAAACCAGTTGGTAC
TGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGTTTCTAACCGCA
ACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATCGACCTTGTGATTGAA
GGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTCAGGC
TGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATCCCAA
CCTACGTTGTTGGTGTCAATGCGGATGCTTACAAGCCAGATGAGCCCATC
ATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCAAGGG
TCTTGACCAGAAAGTTGGCATTATCAAGGGAACCATGACCACCACACACT
CGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTGACCCTCAG
CGTGNCAAAGCAGCTGCACTCAACATTGTCCAACATCAACTGGTGCGGNC
AAAGCTGTGGCCCTTGTCCTCCAGCACT
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