EY650182

Overview
NameEY650182
Unique NameEY650182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.969e-48
Identity = 108/208 (51.92%), Postives = 137/208 (65.87%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            + V INGFGRIGR  LR    RKD  +++VAIND     + AS++ KYDST G +  +V   G + I +DGK I+V   R+PVN+PWG  G+D VI+ TGVF + + A KHI AGAKKV+ITAP     P +VVGVN D Y PD  IISNASCTTNCLAP  K ++ K GI +G MTT HS T  Q+ +D  SH+D +    A+ NI+
Sbjct:    3 ITVGINGFGRIGRLVLRIALSRKD--IQIVAINDPFIAPEYASYMFKYDSTHGRYSGEVSHEG-ENIVIDGKKIRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSS-TAPMFVVGVNEDKYTPDLNIISNASCTTNCLAPLAKIINNKFGIEEGLMTTVHSITATQKTVDGPSHKDWRSGPTASGNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.418e-47
Identity = 106/214 (49.53%), Postives = 136/214 (63.55%), Query Frame = 2
Query:  245 VAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            +A    ++VAINGFGRIGR   R    +K+  +E+VA+ND       +HLLKYDS  G F+  V  V  D  + +D K + V S ++P NLPW +  ID+V+E TG FV  EGA  H+QAGAK+V+I+AP K   I T V  VN      ++ IIS ASCTTNCLAP V  L++  GI+ GTM T H+YT DQRL DA H D +R +AAA NIV
Sbjct:    2 LAKSKTIRVAINGFGRIGRLVFRALLSQKN--IEIVAVNDLTHPDTLAHLLKYDSAHGEFKKKV--VAKDNTLMIDKKKVLVFSEKDPANLPWAEHNIDIVVESTGRFVSEEGASLHLQAGAKRVIISAPAKQKTIKTVVYNVNHKIINAEDKIISAASCTTNCLAPMVHVLEKNFGILHGTMVTVHAYTADQRLQDAPHSDLRRARAAACNIV 211          

HSP 2 Score: 23.0978 bits (48), Expect = 1.418e-47
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PT+TGA KA+ LV+
Sbjct:  212 PTTTGAAKAIGLVV 225          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.858e-47
Identity = 91/104 (87.50%), Postives = 96/104 (92.31%), Query Frame = 2
Query:  569 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNA+ Y  ++ IISNASCTTNCLAPFVK LDQK GIIKGTMTTTHSYTGDQRLLDASHRD +R +AAALNIV
Sbjct:    1 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIV 104          

HSP 2 Score: 27.335 bits (59), Expect = 1.858e-47
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PTSTGA KAVALVL
Sbjct:  105 PTSTGAAKAVALVL 118          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 185.267 bits (469), Expect = 2.408e-47
Identity = 106/212 (50.00%), Postives = 134/212 (63.21%), Query Frame = 2
Query:  257 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD--IPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            AKLKV INGFGRIGR  LR   G  +  +E V IND       ++LLKYDST G   + V+    DGI +DG  I  VS RNP  LPWG LG D V+E TG+F D EGA KH+QAGAK+V+I+AP K    + T +VGVN D + P  + I+SNASCTTNCLAP  K ++   G+ +G MTT H+ T  Q  +D  S +D +  + AA NI+
Sbjct:    2 AKLKVGINGFGRIGRLVLRA--GINNPNIEFVGINDLVPPDNLAYLLKYDSTHGKLRSQVE-AKDDGIVIDGHFIPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDVIVSNASCTTNCLAPIAKVINDNFGLTEGLMTTVHAMTATQPTVDGPSKKDWRGGRGAAQNII 210          

HSP 2 Score: 25.7942 bits (55), Expect = 2.408e-47
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAVALVL
Sbjct:  211 PSSTGAAKAVALVL 224          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 3.028e-47
Identity = 102/207 (49.28%), Postives = 136/207 (65.70%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            ++V INGFGRIGR   R    R D  +E+V IND       +++LKYDST G FE  V+  G   + V+GK I+V S R+P NL W ++ +D+V+E TG+F+  + A KHIQAGAKKV+IT P K D P +V+GVN   YK  E I+SNASCTTNCLAP  K L+ K GI++G MTT H+ T  Q+ +D  S +D +  + AA NI+
Sbjct:    3 IRVGINGFGRIGRVVFRAAQRRND--IEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQG-GALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYK-GEAIVSNASCTTNCLAPLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAAQNII 205          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.165e-47
Identity = 107/208 (51.44%), Postives = 135/208 (64.90%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            + V INGFGRIGR  LR    R D  ++VVAIND     + A+++ KYDST   ++ +V   G   I++DGK I V   R+PVN+PWG  G+D VIE TGVF   EGA KHI AGAKKV+ITAP K D P +VVGVN + Y  D  I+SNASCTTNCLAP  K ++   GI  G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    3 ITVGINGFGRIGRLVLRVALSRAD--IKVVAINDPFIAPEYAAYMFKYDSTHKAYKGEVSASGNK-INIDGKEITVFQERDPVNIPWGKAGVDYVIESTGVFTTLEGAQKHIDAGAKKVVITAPSK-DAPMFVVGVNEEKYTSDLNIVSNASCTTNCLAPLAKVVNDTFGIESGLMTTVHSMTATQKTVDGPSHKDWRGGRTASGNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 5.332e-47
Identity = 105/212 (49.53%), Postives = 134/212 (63.21%), Query Frame = 2
Query:  257 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD--IPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            AKLKV INGFGRIGR  LR   G  +  +E V IND       ++LLKYDST G   + V+    DGI +DG  I  VS RNP  LPWG LG D V+E TG+F D EGA KH+QAGA++V+I+AP K    + T +VGVN D + P +  I+SNASCTTNCLAP  K ++   G+ +G MTT H+ T  Q  +D  S +D +  + AA NI+
Sbjct:    2 AKLKVGINGFGRIGRLVLRA--GINNPNIEFVGINDLVPPDNLAYLLKYDSTHGRLRSQVE-TKDDGIVIDGHFIPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDLIVSNASCTTNCLAPIAKVINDNFGLTEGLMTTVHAMTATQPTVDGPSKKDWRGGRGAAQNII 210          

HSP 2 Score: 25.7942 bits (55), Expect = 5.332e-47
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAVALVL
Sbjct:  211 PSSTGAAKAVALVL 224          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_CHLPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia pneumoniae GN=gap PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.334e-47
Identity = 107/208 (51.44%), Postives = 139/208 (66.83%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR  LR    +++S +EV+AIND       ++L K+DST G F  DV+    D + V  + IQ +S RN  NLPW DLG+DLVIE TG+F  +E A KHIQAGAK+VLI+APGKGDIPT+V+GVN   + P++  +ISNASCTTNCLAP  K L    GI +G MTT H+ T  Q ++D  S +D +  +    NI+
Sbjct:    1 MKVVINGFGRIGRLVLRQIL-KRNSSVEVLAINDLVPGDALTYLFKFDSTHGRFPEDVR-CEADHLIVGKRKIQFLSERNVQNLPWKDLGVDLVIECTGLFTKKEDAEKHIQAGAKRVLISAPGKGDIPTFVMGVNHKTFNPEKDFVISNASCTTNCLAPIAKVLLDNFGITEGLMTTVHAATATQLVVDGPSKKDWRGGRGCLQNII 206          

HSP 2 Score: 22.3274 bits (46), Expect = 5.334e-47
Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query:  865 CTQHC-PTSTGAXKAVALVL 921
            C Q+  P STGA KAV L L
Sbjct:  201 CLQNIIPASTGAAKAVTLCL 220          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.951e-47
Identity = 105/207 (50.72%), Postives = 134/207 (64.73%), Query Frame = 2
Query:  266 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            KVAINGFGRIGR  LR     +   LEVVAIND    K  +HL KYDS+ G F  +++ V      V+GK ++V +  +P  LPWG+LGID+V+E TG F  +E A  H++AGAKKV+I+AP   D+ T V  VN +     E +IS ASCTTNCLAP  K L+ K GI KG MTT H+YT DQ  LD  HR  D +R +AAA++I+
Sbjct:    3 KVAINGFGRIGRLALR--RILEVPGLEVVAINDLTDAKMLAHLFKYDSSQGRFNGEIE-VKEGAFVVNGKEVKVFAEADPEKLPWGELGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNEDLDGTETVISGASCTTNCLAPMAKVLNDKFGIEKGFMTTIHAYTNDQNTLDGPHRKGDFRRARAAAVSII 206          

HSP 2 Score: 21.9422 bits (45), Expect = 6.951e-47
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P STGA KA+A V+
Sbjct:  207 PNSTGAAKAIAQVI 220          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.810e-47
Identity = 97/208 (46.63%), Postives = 135/208 (64.90%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R  +  +   +E+VA+ND     K A+++LKYDST G F+ D++   ++ ++V+ K I     R+P N+PWG  G+D V+E TGVF   E A  H+  GAKKV+I+AP   D P +V+GVN  +Y+PD  ++SNASCTTNCLAP  K +    GI +G MTT HSYT  Q+ +D  SH+D +  + AA NI+
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHDDVEIVAVNDPFIETKYAAYMLKYDSTHGQFKGDIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAP-SADAPMFVMGVNEKSYRPDISVLSNASCTTNCLAPLAKVIHDNFGIAEGLMTTIHSYTATQKTVDGPSHKDWRGGRTAAQNII 207          
The following BLAST results are available for this feature:
BLAST of EY650182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_PICCI7.969e-4851.92Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_MYCPN1.418e-4749.53Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3PA_SINAL1.858e-4787.50Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P1_ANAVT2.408e-4750.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3PC_TRYBB3.028e-4749.28Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_PICPA5.165e-4751.44Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P1_ANASP5.332e-4749.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_CHLPN5.334e-4751.44Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_CLOPA6.951e-4750.72Glyceraldehyde-3-phosphate dehydrogenase OS=Clostr... [more]
G3P_PARBA8.810e-4746.63Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650182 ID=EY650182; Name=EY650182; organism=Citrus sinensis; type=EST; length=928bp
AGCTCATCTTAGCGACCACTGCTTGCTCTTGCTCCGCATCATCCAGCAAA
TACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAATCAGCTCTTCAG
GGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGCAACTCTGCAAG
CCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTCAGTCATTGCTC
TCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACAGGAAGGTTGCT
GCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGTAGAATTGGTAG
GAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCCACTTGAAGTCG
TTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTCACCTCCTCAAG
TACGACTCCACCCTTGGCATCTTTGAAGCCGATGTTAAACCAGTTGGTAC
TGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGTTTCTAACCGCA
ACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATCGACCTTGTGATTGAA
GGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTCAGGC
TGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATCCCAA
CCTACGTTGTTGGTGTCAATGCGGATGCTTACAAGCCAGATGAGCCCATC
ATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCAAGGG
TCTTGACCAGAAAGTTGGCATTATCAAGGGAACCATGACCACCACACACT
CGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTGACCCTCAG
CGTGNCAAAGCAGCTGCACTCAACATTGTCCAACATCAACTGGTGCGGNC
AAAGCTGTGGCCCTTGTCCTCCAGCACT
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