EY650182

Overview
NameEY650182
Unique NameEY650182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_CLOAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium acetobutylicum GN=gap PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.810e-47
Identity = 104/207 (50.24%), Postives = 134/207 (64.73%), Query Frame = 2
Query:  266 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            K+AINGFGRIGR  LR     +   LEVVAIND    K  +HL KYDS+ G F  +++ V      V+GK ++V +  +P  LPWGDLGID+V+E TG F  +E A  H++AGAKKV+I+AP   D+ T V  VN +     E +IS ASCTTNCLAP  K L+ K GI KG MTT H++T DQ  LD  HR  D +R +AAA++I+
Sbjct:    3 KIAINGFGRIGRLALR--RILEVPGLEVVAINDLTDAKMLAHLFKYDSSQGRFNGEIE-VKEGAFVVNGKEVKVFAEADPEKLPWGDLGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNEDLDGTETVISGASCTTNCLAPMAKVLNDKFGIEKGFMTTIHAFTNDQNTLDGPHRKGDLRRARAAAVSII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_MYCGE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma genitalium GN=gapA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.181e-46
Identity = 106/212 (50.00%), Postives = 135/212 (63.68%), Query Frame = 2
Query:  248 AAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            A    +KVAINGFGRIGR   R    + +  +EVVAIND    +  +HLLKYDS  G  +  +  V  + + +D K + V S ++P NLPW +  ID+VIE TG FV  EGA  H++AGAK+V+I+AP K   I T V  VN      D+ IIS ASCTTNCLAP V  L++  GI+ GTM T H+YT DQRL DA H D +R +AAA+NIV
Sbjct:    3 AKNRTIKVAINGFGRIGRLVFRSLLSKAN--VEVVAINDLTQPEVLAHLLKYDSAHGELKRKIT-VKQNILQIDRKKVYVFSEKDPQNLPWDEHDIDVVIESTGRFVSEEGASLHLKAGAKRVIISAPAKEKTIRTVVYNVNHKTISSDDKIISAASCTTNCLAPLVHVLEKNFGIVYGTMLTVHAYTADQRLQDAPHNDLRRARAAAVNIV 211          

HSP 2 Score: 23.0978 bits (48), Expect = 1.181e-46
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PT+TGA KA+ LV+
Sbjct:  212 PTTTGAAKAIGLVV 225          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_MYCLE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=gapA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.406e-46
Identity = 100/210 (47.62%), Postives = 132/210 (62.86%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKD---SPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN-PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            ++V INGFGRIGRNF R    +++   + ++VVAIND       ++LLK+DS LG    DV     D I V  + I+ ++ R  P  LPW   G+D+V+E TG+F +   A  H++AGAKKV+++AP      T V GVN D Y   + IISNASCTTNCLAP  K L  + GI+KG MTT H+YT DQ L D  H D +R +AAALN+V
Sbjct:    3 VRVGINGFGRIGRNFYRALLAQQEHGIADVQVVAINDITDNSTLAYLLKFDSILGRLPHDVSLEEEDTIVVGSEKIKALAVREGPAALPWHAFGVDVVVESTGLFTNAAKAKGHLEAGAKKVIVSAPATDPDITIVFGVNDDKYDGSQNIISNASCTTNCLAPLAKVLHDQFGIVKGLMTTVHAYTQDQNLQDGPHSDLRRARAAALNVV 212          

HSP 2 Score: 24.6386 bits (52), Expect = 3.406e-46
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            PTSTGA KA+ LV+
Sbjct:  213 PTSTGAAKAIGLVM 226          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.407e-46
Identity = 106/208 (50.96%), Postives = 138/208 (66.35%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KVAINGFGRIGR  LR    RK   LEVVA+ND    V  A+++ KYDST G ++ +V   G D + +DG  I V   ++P NLPWG LG+D+VI+ TGVF + + A KH+ AGAKKV+ITAP K   P +VVGVN D Y   E I+SNASCTTNCLAP  K ++ + GI +  MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    2 VKVAINGFGRIGRLVLRIALQRK--ALEVVAVNDPFISVDYAAYMFKYDSTHGRYKGEVTTSGND-LVIDGHKIAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPSK-TAPMFVVGVNEDKYN-GETIVSNASCTTNCLAPIAKIINDEFGIDEALMTTVHSITATQKTVDGPSHKDWRGGRTASGNII 204          

HSP 2 Score: 21.9422 bits (45), Expect = 3.407e-46
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  205 PSSTGAAKAVGKVL 218          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.373e-46
Identity = 99/208 (47.60%), Postives = 136/208 (65.38%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R  +  +   +E+VA+ND       A+++LKYDST G F+ DVK    +G+ VDGK ++    R+P N+PW + G D VIE TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN + YK D  ++SNASCTTNCLAP  K ++   G+++G MTT HSYT  Q+ +D  S +D +  +AAA NI+
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFKGDVK-FSDNGLDVDGKHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPS-ADAPMFVMGVNNETYKSDIKVLSNASCTTNCLAPLAKVVNDNFGLVEGLMTTVHSYTATQKTVDGPSSKDWRGGRAAAQNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.440e-46
Identity = 99/208 (47.60%), Postives = 137/208 (65.87%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            + V++NGFGRIGR   R    RKD  + +VAIND       A+++ KYDST G F+ +V     D I ++GK + V + ++P  LPWG LG+D+ I+ TG+F + + A KHI+AGAKKV+ITAP  G  P YV+GVN + Y PD+ I+SNASCTTNCLAP  K +  + GI +G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    2 VNVSVNGFGRIGRLVTRIAISRKD--INLVAINDPFISTDYAAYMFKYDSTHGRFDGEVSH-DKDHIILNGKKVAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIEAGAKKVVITAPS-GSAPMYVMGVNEETYTPDQKIVSNASCTTNCLAPLAKVIHNEFGIKEGLMTTVHSMTATQKTVDGPSHKDWRGGRTASGNII 205          

HSP 2 Score: 21.9422 bits (45), Expect = 4.440e-46
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  206 PSSTGAAKAVGKVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 4.440e-46
Identity = 99/207 (47.83%), Postives = 131/207 (63.29%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHRDPQRXKAAALNIV 880
            +++AINGFGRIGRN LR  + G     L+VVAIND G     +HL +YDS  G F  +V+    + + V G  I V + RNP  LPW  LG+D+V+E TG+F  R+ A  H+QAGA KVLI+APGK    T V GVN +  +    I+SNASCTTNCLAP  + L +++GI  G MTT H+YT DQ L D  H D  R ++A  +++
Sbjct:    3 IRLAINGFGRIGRNVLRALYTGHYREQLQVVAINDLGDAAVNAHLFQYDSVHGHFPGEVEH-DAESLRVMGDRIAVSAIRNPAELPWKSLGVDIVLECTGLFTSRDKAAAHLQAGAGKVLISAPGKDVEATVVYGVNHEVLRASHRIVSNASCTTNCLAPVAQVLHRELGIEHGLMTTIHAYTNDQNLSDVYHPDLYRARSATQSMI 208          

HSP 2 Score: 23.0978 bits (48), Expect = 4.440e-46
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  856 QSSCTQHCPTSTGAXKAVALVL 921
            +S+     PT TGA +AV LVL
Sbjct:  201 RSATQSMIPTKTGAAEAVGLVL 222          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.711e-46
Identity = 101/208 (48.56%), Postives = 135/208 (64.90%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            + + INGFGRIGR  LR    R D  ++VVA+ND     + A+++ KYDST G ++ +V     D + +DG+ I+V   ++P ++PWG  G+D VIE TGVF   EGA KHI  GAKKV+ITAP   D P +VVGVN   Y PD  I+SNASCTTNCLAP  K ++ K GI +G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    3 ITIGINGFGRIGRLVLRIALQRSD--IKVVAVNDPFIAPEYAAYMFKYDSTHGRYKGEVTSKD-DSLVIDGQSIKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPSS-DAPMFVVGVNEQKYTPDLKIVSNASCTTNCLAPLAKVINDKFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.741e-46
Identity = 101/207 (48.79%), Postives = 137/207 (66.18%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLD-ASHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R    +K S +E++AIND    +  +++LKYDST G+F+  +     D I ++GK I+V S ++P  L W DL ID+VIE TG+F+ RE A KHI AG+KKV++T P K DIP +V G N   Y+  E I+SNASCTTNCLAP  K +D   GII+G MTT H+ T  Q+++D AS +D +  + A  NI+
Sbjct:    3 IKVGINGFGRIGRVLFRL--AQKRSDIEIIAINDLLAPEYIAYMLKYDSTHGVFKKHIT-FDKDNIIINGKNIRVTSIKDPEKLMWHDLSIDVVIESTGLFLKREQAYKHILAGSKKVVVTGPSKDDIPMFVRGANFHKYQ-GESIVSNASCTTNCLAPLSKVIDDNFGIIEGLMTTVHASTATQKIVDGASDKDWRGGRGALQNII 205          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.741e-46
Identity = 103/208 (49.52%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    +    LEVVA+ND       +HLLKYD+  G F  +V+ +   G  V+GK I+     +   LPWGDL ID+V+E TG + D+E A  HI AGAKKVLI+AP KGD+ T V   N D     E ++S ASCTTN LAP  K L  + G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 IKVAINGFGRIGRLAFR--RIQDVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVI-EGGFRVNGKEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTNHDTLDGSETVVSGASCTTNSLAPVAKVLSDEFGLVEGFMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
The following BLAST results are available for this feature:
BLAST of EY650182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_CLOAB8.810e-4750.24Glyceraldehyde-3-phosphate dehydrogenase OS=Clostr... [more]
G3P_MYCGE1.181e-4650.00Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P_MYCLE3.406e-4647.62Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3P1_KLULA3.407e-4650.96Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_COCIM4.373e-4647.60Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_ZYGRO4.440e-4647.60Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_PSEAE4.440e-4647.83Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudo... [more]
G3P_DEBHA5.711e-4648.56Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_BUCAI9.741e-4648.79Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P1_STAES9.741e-4649.52Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650182 ID=EY650182; Name=EY650182; organism=Citrus sinensis; type=EST; length=928bp
AGCTCATCTTAGCGACCACTGCTTGCTCTTGCTCCGCATCATCCAGCAAA
TACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAATCAGCTCTTCAG
GGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGCAACTCTGCAAG
CCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTCAGTCATTGCTC
TCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACAGGAAGGTTGCT
GCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGTAGAATTGGTAG
GAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCCACTTGAAGTCG
TTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTCACCTCCTCAAG
TACGACTCCACCCTTGGCATCTTTGAAGCCGATGTTAAACCAGTTGGTAC
TGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGTTTCTAACCGCA
ACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATCGACCTTGTGATTGAA
GGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTCAGGC
TGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATCCCAA
CCTACGTTGTTGGTGTCAATGCGGATGCTTACAAGCCAGATGAGCCCATC
ATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCAAGGG
TCTTGACCAGAAAGTTGGCATTATCAAGGGAACCATGACCACCACACACT
CGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTGACCCTCAG
CGTGNCAAAGCAGCTGCACTCAACATTGTCCAACATCAACTGGTGCGGNC
AAAGCTGTGGCCCTTGTCCTCCAGCACT
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