EY650182

Overview
NameEY650182
Unique NameEY650182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.741e-46
Identity = 103/208 (49.52%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    +    LEVVA+ND       +HLLKYD+  G F  +V+ +   G  V+GK I+     +   LPWGDL ID+V+E TG + D+E A  HI AGAKKVLI+AP KGD+ T V   N D     E ++S ASCTTN LAP  K L  + G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 IKVAINGFGRIGRLAFR--RIQDVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVI-EGGFRVNGKEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTNHDTLDGSETVVSGASCTTNSLAPVAKVLSDEFGLVEGFMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.272e-45
Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R  +  +   +E+VA+ND       A+++LKYDST G F+ DVK    +G+ VDGK ++    R+P N+PW + G D VIE TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN + YK D  ++SNASCTTNCLAP  K ++   G+++G MTT HSYT  Q+ +D  S +D +  + AA NI+
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFKGDVK-FSENGLDVDGKHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPS-ADAPMFVMGVNNETYKSDIKVLSNASCTTNCLAPLAKVVNDNFGLVEGLMTTVHSYTATQKTVDGPSSKDWRGGRTAAQNII 206          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3PC_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Leishmania mexicana GN=GAPC PE=3 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 1.662e-45
Identity = 97/207 (46.86%), Postives = 140/207 (67.63%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R    R D  +E+V IND    +  ++ LKYDST G F+  V+ +    + V+GK I+V S R+P NL W ++G+++V+E TG+F+ +E A KHI+AGA++V++T P K D P +V+GVN   YK  +PIISNASCTTNCLAP  K +++K GI++G MTT H+ T  Q+ +D  S +D +  + A+ NI+
Sbjct:    2 VKVGINGFGRIGRVVFRAAQMRPD--IEIVGINDLLDAEYMAYSLKYDSTHGRFDGTVEVI-KGALVVNGKSIRVTSERDPANLKWDEIGVEVVVESTGLFLTQETAHKHIEAGARRVVMTGPPKDDTPMFVMGVNHTTYK-GQPIISNASCTTNCLAPLAKVVNEKYGIVEGLMTTVHATTATQKTVDGPSLKDWRGGRGASQNII 204          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.669e-45
Identity = 98/207 (47.34%), Postives = 137/207 (66.18%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R    +K S +E+VAIND    +  +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y+  + I+SNASCTTNCLAP  K ++   GII+G MTT H+ T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    3 IKVGINGFGRIGRIVFRA--AQKRSDIEIVAINDLLDAEYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE-GQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNII 205          

HSP 2 Score: 21.9422 bits (45), Expect = 1.669e-45
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  206 PSSTGAAKAVGKVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.669e-45
Identity = 98/207 (47.34%), Postives = 137/207 (66.18%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R    +K S +E+VAIND    +  +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y+  + I+SNASCTTNCLAP  K ++   GII+G MTT H+ T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    3 IKVGINGFGRIGRIVFRA--AQKRSDIEIVAINDLLDAEYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE-GQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNII 205          

HSP 2 Score: 21.9422 bits (45), Expect = 1.669e-45
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  206 PSSTGAAKAVGKVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.175e-45
Identity = 104/206 (50.49%), Postives = 133/206 (64.56%), Query Frame = 2
Query:  269 VAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            V INGFGRIGR  LR    R D  + V+AIND       A+++ KYDST G F+  V   G   + ++GK I+V   R+P N+PWG  G+D V++ TGVF   EGA KHI AGAKKV+ITAP K D P +VVGVN + Y PD  I+SNASCTTNCLAP  K ++   GI +G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    5 VGINGFGRIGRLVLRIALSRDD--INVIAINDPFIAPDYAAYMFKYDSTHGKFKGTVTHEGKY-LVINGKKIEVFQERDPANIPWGKEGVDYVLDSTGVFTTIEGAQKHIDAGAKKVIITAPSK-DAPMFVVGVNHEEYTPDIKILSNASCTTNCLAPLAKVINDIFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNII 206          

HSP 2 Score: 21.9422 bits (45), Expect = 2.175e-45
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  207 PSSTGAAKAVGKVL 220          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_BUCAP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gapA PE=3 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.702e-45
Identity = 101/207 (48.79%), Postives = 139/207 (67.15%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLD-ASHRDPQRXKAAALNIV 880
            +K+ INGFGRIGR   R    R++  +EVVAIND    K  +++LKYDST G F+ D++ V  + + ++GK I++ S ++P  L W  L ID+VIE TG+F+ ++ A KHI +GAKKV+IT P K DIP +V G N D YK  E I+SNASCTTNCLAP  K +D   GII+G MTT H+ T  Q+++D AS +D +  + A  NI+
Sbjct:    3 IKIGINGFGRIGRVLFRLAQEREN--IEVVAINDLLDPKYIAYMLKYDSTHGNFKKDIE-VKNNNLIINGKKIRITSIKDPEKLMWDKLLIDVVIESTGLFLTKDTAYKHILSGAKKVVITGPSKDDIPMFVRGANFDKYK-GEKIVSNASCTTNCLAPLSKVIDDHFGIIEGLMTTVHASTATQKIVDSASKKDWRGGRGALQNII 205          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.815e-45
Identity = 98/207 (47.34%), Postives = 135/207 (65.22%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +KV INGFGRIGR   R    +K S +E+VAIND       +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  K ++   GII+G MTT H+ T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    3 IKVGINGFGRIGRIVFRA--AQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNII 205          

HSP 2 Score: 21.9422 bits (45), Expect = 4.815e-45
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  206 PSSTGAAKAVGKVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_STRPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes GN=gap PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 6.273e-45
Identity = 102/209 (48.80%), Postives = 127/209 (60.77%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KV INGFGRIGR   R    +    +EV  IND       +HLLKYD+T G F+  V+ V   G  V+G  I+V + R+P N+ W   G+++V+E TG F  +E A KH+ A GAKKV+ITAPG  D+ T V   N D     E +IS ASCTTNCLAP  K L    GI KG MTT H+YTGDQ +LD  HR  D +R +A A NIV
Sbjct:    3 VKVGINGFGRIGRLAFR--RIQNIEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVE-VKEGGFEVNGNFIKVSAERDPENIDWATDGVEIVLEATGFFAKKEAAEKHLHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIV 208          

HSP 2 Score: 22.7126 bits (47), Expect = 6.273e-45
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P STGA KA+ LV+
Sbjct:  209 PNSTGAAKAIGLVI 222          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_STRP8 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M18 GN=gap PE=3 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 6.273e-45
Identity = 102/209 (48.80%), Postives = 127/209 (60.77%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KV INGFGRIGR   R    +    +EV  IND       +HLLKYD+T G F+  V+ V   G  V+G  I+V + R+P N+ W   G+++V+E TG F  +E A KH+ A GAKKV+ITAPG  D+ T V   N D     E +IS ASCTTNCLAP  K L    GI KG MTT H+YTGDQ +LD  HR  D +R +A A NIV
Sbjct:    3 VKVGINGFGRIGRLAFR--RIQNIEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVE-VKEGGFEVNGNFIKVSAERDPENIDWATDGVEIVLEATGFFAKKEAAEKHLHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIV 208          

HSP 2 Score: 22.7126 bits (47), Expect = 6.273e-45
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P STGA KA+ LV+
Sbjct:  209 PNSTGAAKAIGLVI 222          
The following BLAST results are available for this feature:
BLAST of EY650182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P1_STAEQ9.741e-4649.52Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P_COCP71.272e-4547.12Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3PC_LEIME1.662e-4546.86Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P1_SALTY1.669e-4547.34Glyceraldehyde-3-phosphate dehydrogenase OS=Salmon... [more]
G3P1_SALTI1.669e-4547.34Glyceraldehyde-3-phosphate dehydrogenase OS=Salmon... [more]
G3P_PICAN2.175e-4550.49Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_BUCAP3.702e-4548.79Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P1_ESCF34.815e-4547.34Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P_STRPY6.273e-4548.80Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRP86.273e-4548.80Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650182 ID=EY650182; Name=EY650182; organism=Citrus sinensis; type=EST; length=928bp
AGCTCATCTTAGCGACCACTGCTTGCTCTTGCTCCGCATCATCCAGCAAA
TACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAATCAGCTCTTCAG
GGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGCAACTCTGCAAG
CCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTCAGTCATTGCTC
TCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACAGGAAGGTTGCT
GCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGTAGAATTGGTAG
GAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCCACTTGAAGTCG
TTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTCACCTCCTCAAG
TACGACTCCACCCTTGGCATCTTTGAAGCCGATGTTAAACCAGTTGGTAC
TGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGTTTCTAACCGCA
ACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATCGACCTTGTGATTGAA
GGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTCAGGC
TGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATCCCAA
CCTACGTTGTTGGTGTCAATGCGGATGCTTACAAGCCAGATGAGCCCATC
ATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCAAGGG
TCTTGACCAGAAAGTTGGCATTATCAAGGGAACCATGACCACCACACACT
CGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTGACCCTCAG
CGTGNCAAAGCAGCTGCACTCAACATTGTCCAACATCAACTGGTGCGGNC
AAAGCTGTGGCCCTTGTCCTCCAGCACT
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