EY650182

Overview
NameEY650182
Unique NameEY650182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P_LACLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=gap PE=3 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.073e-44
Identity = 102/209 (48.80%), Postives = 129/209 (61.72%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQ-AGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KV INGFGRIGR  LR    ++   +EV  IND       +HLLKYD+T G F+  V+ V  DG  V+GK ++V + RNP ++ W D G+++V+E TG F  +E A KH+   GAKKVLITAPG  D+ T V   N       E +IS  SCTTN LAP    L++  G+  GTMTT HSYTGDQ  LD  HR  D +R +AAA NIV
Sbjct:    3 VKVGINGFGRIGRLALR--RIQEVEGVEVAHINDLTDPAMLAHLLKYDTTQGRFKGTVE-VKEDGFDVNGKFVKVTAERNPEDIQWADSGVEIVLEATGFFATKEKAEKHLHPGGAKKVLITAPGGNDVKTVVFNTNHTILDGTETVISAGSCTTNSLAPMADALNKNFGVKGGTMTTVHSYTGDQMTLDGPHRGGDFRRARAAAENIV 208          

HSP 2 Score: 21.9422 bits (45), Expect = 3.073e-44
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P S+GA KA+ LVL
Sbjct:  209 PASSGAAKAIGLVL 222          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.004e-44
Identity = 97/215 (45.12%), Postives = 137/215 (63.72%), Query Frame = 2
Query:  245 VAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEA-DVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +++  K+K+ INGFGRIGR   R    R D  +E+VA+ND        +++ KYDS  G ++  +VK   ++ +    K + V   RNP  +PWG+ G++ V+E TGVF D+E A  HI+ GAKKV+ITAP K D P +VVGVN   YKPD  I+SNASCTTNCLAP  K ++ + GI++G MTT HS T  Q+ +D  S++D +  + A  NI+
Sbjct:    1 MSSTGKIKIGINGFGRIGRLVARVALLRDD--IELVAVNDPFISTDYMTYMFKYDSVHGQWKKHEVKVKDSNTLLFGEKAVTVFGCRNPEEIPWGETGVEYVVESTGVFTDKEKAAAHIKGGAKKVVITAPSK-DAPMFVVGVNEHEYKPDLAIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSNKDWRGGRGAGFNII 212          

HSP 2 Score: 21.9422 bits (45), Expect = 4.004e-44
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  213 PSSTGAAKAVGKVL 226          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.802e-44
Identity = 103/208 (49.52%), Postives = 132/208 (63.46%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +++AINGFGRIGR  LR    R  S +EVVA+ND       A+++ KYDST G +  +V       I +DGK I V   R+P NLPWG   ID+ I+ TGVF + + A KHI AGAKKV+ITAP     P +VVGVN D Y  D  I+SNASCTTNCLAP  K +D+  GI +G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    2 VRIAINGFGRIGRLVLRVALSR--SNIEVVAVNDPFITTDYAAYMFKYDSTHGRYAGEVTH-DDKHIIIDGKKIAVHQERDPANLPWGSENIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS-TAPMFVVGVNEDKYTSDLKIVSNASCTTNCLAPLAKVIDEAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNII 205          

HSP 2 Score: 21.9422 bits (45), Expect = 6.802e-44
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  206 PSSTGAAKAVGKVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 6.802e-44
Identity = 101/208 (48.56%), Postives = 133/208 (63.94%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDA-SHRDPQRXKAAALNIV 880
            +++AINGFGRIGR  LR    RKD  +EVVA+ND       A++++KYDST G ++  V       I +DG  I     R+P NLPWG L ID+ ++ TGVF + + A KHI AGAKKV+ITAP     P +VVGVN   Y PD+ I+SNASCTTNCLAP  K ++   GI +G MTT HS T  Q+ +D  SH+D +  + A+ NI+
Sbjct:    2 IRIAINGFGRIGRLVLRLALQRKD--IEVVAVNDPFISNDYAAYMVKYDSTHGRYKGTVSH-DDKHIIIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQKHIDAGAKKVVITAPSSS-APMFVVGVNHTKYTPDKKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSMTATQKTVDGPSHKDWRGGRTASGNII 205          

HSP 2 Score: 21.9422 bits (45), Expect = 6.802e-44
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  880 PTSTGAXKAVALVL 921
            P+STGA KAV  VL
Sbjct:  206 PSSTGAAKAVGKVL 219          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    ++   LEVVA+ND       +HLLKYD+  G F  +V+ V   G  V+GK ++  S  +   LPW DL ID+V+E TG + D++ A  HI+AGAKKVLI+AP  GD+ T V   N       E ++S ASCTTN LAP  K L+   G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    ++   LEVVA+ND       +HLLKYD+  G F  +V+ V   G  V+GK ++  S  +   LPW DL ID+V+E TG + D++ A  HI+AGAKKVLI+AP  GD+ T V   N       E ++S ASCTTN LAP  K L+   G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    ++   LEVVA+ND       +HLLKYD+  G F  +V+ V   G  V+GK ++  S  +   LPW DL ID+V+E TG + D++ A  HI+AGAKKVLI+AP  GD+ T V   N       E ++S ASCTTN LAP  K L+   G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    ++   LEVVA+ND       +HLLKYD+  G F  +V+ V   G  V+GK ++  S  +   LPW DL ID+V+E TG + D++ A  HI+AGAKKVLI+AP  GD+ T V   N       E ++S ASCTTN LAP  K L+   G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    ++   LEVVA+ND       +HLLKYD+  G F  +V+ V   G  V+GK ++  S  +   LPW DL ID+V+E TG + D++ A  HI+AGAKKVLI+AP  GD+ T V   N       E ++S ASCTTN LAP  K L+   G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
BLAST of EY650182 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  263 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKGLDQKVGIIKGTMTTTHSYTGDQRLLDASHR--DPQRXKAAALNIV 880
            +KVAINGFGRIGR   R    ++   LEVVA+ND       +HLLKYD+  G F  +V+ V   G  V+GK ++  S  +   LPW DL ID+V+E TG + D++ A  HI+AGAKKVLI+AP  GD+ T V   N       E ++S ASCTTN LAP  K L+   G+++G MTT H+YTGDQ   DA HR  D +R +AAA NI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENII 207          
The following BLAST results are available for this feature:
BLAST of EY650182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_LACLA3.073e-4448.80Glyceraldehyde-3-phosphate dehydrogenase OS=Lactoc... [more]
G3PC_GINBI4.004e-4445.12Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_CANGA6.802e-4449.52Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P1_YEAST6.802e-4448.56Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Sacc... [more]
G3P1_STAAW6.981e-4448.08Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAU6.981e-4448.08Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAS6.981e-4448.08Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAR6.981e-4448.08Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAN6.981e-4448.08Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAM6.981e-4448.08Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650182 ID=EY650182; Name=EY650182; organism=Citrus sinensis; type=EST; length=928bp
AGCTCATCTTAGCGACCACTGCTTGCTCTTGCTCCGCATCATCCAGCAAA
TACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAATCAGCTCTTCAG
GGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGCAACTCTGCAAG
CCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTCAGTCATTGCTC
TCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACAGGAAGGTTGCT
GCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGTAGAATTGGTAG
GAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCCACTTGAAGTCG
TTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTCACCTCCTCAAG
TACGACTCCACCCTTGGCATCTTTGAAGCCGATGTTAAACCAGTTGGTAC
TGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGTTTCTAACCGCA
ACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATCGACCTTGTGATTGAA
GGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTCAGGC
TGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATCCCAA
CCTACGTTGTTGGTGTCAATGCGGATGCTTACAAGCCAGATGAGCCCATC
ATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCAAGGG
TCTTGACCAGAAAGTTGGCATTATCAAGGGAACCATGACCACCACACACT
CGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTGACCCTCAG
CGTGNCAAAGCAGCTGCACTCAACATTGTCCAACATCAACTGGTGCGGNC
AAAGCTGTGGCCCTTGTCCTCCAGCACT
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