EY650181

Overview
NameEY650181
Unique NameEY650181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650181 vs. ExPASy Swiss-Prot
Match: IOLC_MYCH2 (5-dehydro-2-deoxygluconokinase OS=Mycoplasma hyopneumoniae (strain 232) GN=iolC PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 41/173 (23.70%), Postives = 76/173 (43.93%), Query Frame = 2 
Query:   95 VSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFDQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSXXXXXXXXXXXXXXXXSYDPNLRLPLWPSPDD 613
            +  G + IDF P     +L  +  F K  GG+ AN+AI ++RL  K  F G + DD+FG+ +  + ++  +    I   +  +  L F  + ++ +   + YR+  AD+ +   +++L+ I   K+      SL   P R                  +D + R   W + D+
Sbjct:    8 ILIGRITIDFNPMDYYNNLENSSLFKKYIGGSAANIAIGLSRLKNKVGFFGSVSDDQFGNFVLNVFEKEKIDISHIKKTKDHKLGLTFTEMLSEEKSTILMYRDNVADLQIDVSDIDLDYILRTKILVISGTSLAKSPSREAVLKALFLAKNNGIKVVFDIDYRPYSWKNLDE 180
The following BLAST results are available for this feature:
BLAST of EY650181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
IOLC_MYCH25.803e-1123.705-dehydro-2-deoxygluconokinase OS=Mycoplasma hyopn... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650181 ID=EY650181; Name=EY650181; organism=Citrus sinensis; type=EST; length=907bp
CCCACGCGTCCGCTCTCTCCATTCAATACACATCGTTTCGATTTTTGTAC
AAATGGCTACCAACGGCGCCGTTTCATCCTCCTCAAGCCTGATCGTGTCC
TTCGGTGAGATGCTCATCGACTTCGTCCCGACGGTCTCCGGCGTCTCCCT
CGCCGAGGCCCCCGGATTCCTCAAGGCCCCCGGCGGCGCCCCCGCCAACG
TCGCCATAGCCGTAGCTCGCCTCGGCGGCAAGGCAGCCTTCGTCGGCAAG
CTCGGCGACGACGAGTTCGGTCACATGCTCGCTGGGATCTTGAAGGAGAA
CGGAGTCAGCGCTGACGGCATCAACTTTGACCAGGGTGCCAGAACTGCCC
TTGCATTCGTGACCCTGCGGGCTGACGGCGAGCGCGAGTTCATGTTTTAC
AGAAACCCCAGCGCTGATATGCTCTTGAGACCCGACGAGCTTAATCTTGA
GCTGATCAGATCTGCCAAAGTTTTCCACTATGGGTCAATAAGCCTGATAG
TGGAGCCATGCCGATCAGCGCACTTGGAGGCAATGAAAGCAGCCAAGGAA
GCATGAGCCCTTCTCTCATACGACCCCAACCTCCGGCTACCGTTGTGGCC
CTCGCCGGATGATGCGCGCGAGCAGATAATGAGCATCTGGGACAATGCCG
ANGGTATCAAAGTCAGTGATGTGGAGCTTGAATTCCTCACCGGGAGTGAC
AAGATTGATGATGAATCAGCATTGTCGCTTTTGCATCCCAACTGAAACTN
CTTTTGGTCACCCTTGGTGAGCATGGCTGCAGATACTACACCAAGAGTTT
CAGAGGAGCAGTGGATGCCTTTCATGTGACACAGTAGATACACCCGGCGC
TGTGATGCATTTGTGGTGCTCCTTTAGGGAAGCCTGTGATGACCATCTGT
CCTTGAG
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