EY650172

Overview
NameEY650172
Unique NameEY650172
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_CLOBH (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=murC PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.591e-32
Identity = 85/267 (31.84%), Postives = 134/267 (50.19%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMIG 858
            A EY    L   P + V+ N+D +H+D ++D D +K+ F +F+K I   G+LV  G+ +  +S++ +   +                         +ITYG +S  D  A ++  + +   ++ + +  + L  + L +PG HN+LNSLA I   L      +   E I         F G  RRF+L G      + DD+AHHPTE+ A L AA+ ++P+  L  VFQPHTYSR + L DDF      AD+++++ +YA RE   G
Sbjct:  167 ACEYKSSFLKFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEASCN-------------------------VITYGINS-GDIQAHNIEYDEKACGNFDVVKDNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHRRFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTKCFDNADEIILADIYAAREKDTG 399          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_CLOB1 (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=murC PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.591e-32
Identity = 85/267 (31.84%), Postives = 134/267 (50.19%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMIG 858
            A EY    L   P + V+ N+D +H+D ++D D +K+ F +F+K I   G+LV  G+ +  +S++ +   +                         +ITYG +S  D  A ++  + +   ++ + +  + L  + L +PG HN+LNSLA I   L      +   E I         F G  RRF+L G      + DD+AHHPTE+ A L AA+ ++P+  L  VFQPHTYSR + L DDF      AD+++++ +YA RE   G
Sbjct:  167 ACEYKSSFLKFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEASCN-------------------------VITYGINS-GDIQAHNIEYDEKACGNFDVVKDNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHRRFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTKCFDNADEIILADIYAAREKDTG 399          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_MYCS2 (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium smegmatis GN=murC PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.995e-32
Identity = 98/269 (36.43%), Postives = 136/269 (50.56%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI----LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA--LIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRE 846
            A E DG LL  +P+VAVVTN++ +H+D F  E A  ++F  F+++I  GG LV+C D   A +L D+                  +D  G     +++ YG  S  D  A ++    Q G+  +    L     P A + L +PG H  LN+LA +          R+       +   L+ F GV RRF+L+GT  G  ++DD+AHHPTEVRA L+AAR         ++  FQPH YSR      +F  AL  ADQVVV  VYA RE
Sbjct:  171 ADESDGSLLEYTPNVAVVTNIEADHLDFFGSEQAYTAVFDSFVERIAPGGALVVCTDDPGAAALADR------------------TDALG----IRVLRYG--STGDNLAGTLLSWEQQGTGAVAHIRLAGEHNPRA-VRLSVPGRHMALNALAALLAA-------REIGAPTDSVLDGLAGFEGVRRRFELVGTAAGARVFDDYAHHPTEVRATLEAARTVVDQNGGRVVVAFQPHLYSRTATFAHEFGAALSVADQVVVLDVYAARE 407          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_CLOBM (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=murC PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.995e-32
Identity = 88/272 (32.35%), Postives = 130/272 (47.79%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMIG 858
            A EY    L   P + V+ N+D +H+D ++D D +K+ F +F+K I   G+LV  G+ +  +S++ +                          +  +ITYG +S      N  Y E  C N     D       + L  + L +PG HN+LNSLA I   L      +   E I         F G  RRF+L G      + DD+AHHPTE+ A L AA+ ++P+  +  VFQPHTYSR + L DDF      AD+++++ +YA RE   G
Sbjct:  167 ACEYKSSFLKFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA-------------------------NCNVITYGINSGDIQAHNIEYDEKACGNFDVFKD------NQKLFSVKLNVPGKHNILNSLASICIGLASDMKDKDIIEGI-------ESFFGTHRRFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFTKCFDNADEIILADIYAAREKDTG 399          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_CLOBK (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum (strain Okra / Type B1) GN=murC PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.995e-32
Identity = 84/267 (31.46%), Postives = 134/267 (50.19%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMIG 858
            A EY    L   P + V+ N+D +H+D ++D D +K+ F +F+K I   G+LV  G+ +  +S++ +                          +  +ITYG +S  D  A ++  + +   ++ + +  + L  + L +PG HN+LNSLA I   L      +   E I         F G  RRF+L G      + DD+AHHPTE+ A L AA+ ++P+  +  VFQPHTYSR + L DDF      AD+++++ +YA RE   G
Sbjct:  167 ACEYKSSFLKFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA-------------------------NCNVITYGINS-GDIQAHNIEYDEKACGNFDVVKDNQKLFSVKLNVPGKHNILNSLASICIGLASDMKDKDIIEGI-------ESFFGTHRRFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFTKCFDNADEIILADIYAAREKDTG 399          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_CLOB6 (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=murC PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.830e-32
Identity = 84/267 (31.46%), Postives = 133/267 (49.81%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMIG 858
            A EY    L   P +  + N+D +H+D ++D D +K+ F +F+K I   G+LV  G+ +  +S++ +   +                         +ITYG +S  D  A ++  + +   ++ + +  + L  + L +PG HN+LNSLA I   L      +   E I         F G  RRF+L G      + DD+AHHPTE+ A L AA+ ++P+  L  VFQPHTYSR + L DDF      AD+++++ +YA RE   G
Sbjct:  167 ACEYKSSFLKFFPYIGAILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEASCN-------------------------VITYGINS-GDIQAHNIEYDEKACGNFDVVKNNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHRRFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTKCFDKADEIILADIYAAREKDTG 399          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_GEOSM (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter sp. (strain M21) GN=murC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.336e-31
Identity = 90/267 (33.71%), Postives = 131/267 (49.06%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            A E DG  L LSP++AVVTN+D +H+D +   + +K  F  F+ +I   G  V+C D+     +L ++K+                         +  +YG S+  D+ A  V   + G S  ++   +G  L +I+  +PG HNVLN+LA IA  + L        E  A        F GV RRF L G   G  + DD+ HHPTE++A L AA+  F    L+ VFQPH YSR   L +DF  A   AD ++++ +Y   E  I
Sbjct:  161 ADESDGSFLLLSPTIAVVTNIDADHLDFYSGIEEIKDTFVEFINKIPFYGLAVLCLDNGNVADVLPRVKK-------------------------RFTSYGLSAQADFRATDV--RLSGFSTSFVAHHKGVRLGEITFSMPGAHNVLNALAAIAVAMELDIPFETIQEGFA-------GFGGVGRRFHLKGEANGIMVVDDYGHHPTEIKATLGAAKAGFAENRLVVVFQPHRYSRTKELFEDFVKAFHDADVLILTDIYPAGEAPI 393          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_GEOMG (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=murC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.336e-31
Identity = 86/268 (32.09%), Postives = 136/268 (50.75%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            A E DG  L LSP++AVVTN+D +H+D +    + +K  F  F+ +I   G  V+C + +    +L ++K+                         + +TYG SS  D  A  +   ++GG+  ++   +G  + ++S  +PG HNVLN+LA IA  + L     Q  E  A       KF GV RRF + G + G  + DD+ HHP E+RA L A +  +P++ L+  FQPH +SR   L  +F    + AD +V++ +Y+  E  I
Sbjct:  161 ADESDGSFLKLSPTIAVVTNIDADHLDFYTGGIEQIKDTFVDFINKIPFYGLAVLCLEDRNIAEILPRVKK-------------------------RFVTYGLSSQADIRATHI--RLEGGTTSFVAHYKGYRMGEVSFAMPGAHNVLNALACIAVAMELDVPFAQIQEGFA-------KFGGVGRRFQVKGEVNGITVVDDYGHHPAEIRATLAAGKSGWPDRRLVVAFQPHRFSRTKELFAEFVTCFYDADVLVLTDIYSAGEAPI 394          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_CLONN (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium novyi (strain NT) GN=murC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.336e-31
Identity = 85/267 (31.84%), Postives = 140/267 (52.43%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMIG 858
            A EY    L   P + V+ N++ +H+D ++D + +++ F +F K I   G L++  D +    +  Q+                         D  +IT+G ++  D  A+++  N  G   + +      L  ++L +PG HN+L++LA I++ L+L       +  +  +   LS F G  RRF++ G + G  + DD+AHHPTE++A L AA+  FP+K +  VFQPHTYSR + L DDFAN+   AD +V++ +YA RE   G
Sbjct:  167 ACEYKASFLKFYPYIGVILNIEADHLDFYKDINDIQNTFLKFAKLIPNDGFLIVNADDKRCVEVSKQV-------------------------DCNVITFGINN-GDVRAKNIVFN-NGRPTFDVYRNEEKLFTLTLNVPGNHNILDALASISSALSL-------NVPVDSIIEGLSTFNGAHRRFEIKGKVDGITVVDDYAHHPTEIKAALNAAKN-FPHKRVFCVFQPHTYSRTISLFDDFANSFSNADTLVLADIYAAREKDTG 398          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_PELPD (UDP-N-acetylmuramate--L-alanine ligase OS=Pelobacter propionicus (strain DSM 2379) GN=murC PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.744e-31
Identity = 94/282 (33.33%), Postives = 144/282 (51.06%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI-GYQWKRFSCFIIGH 897
            A E DG  L LSP++AVVTN+D +H+D +    + +K  F +F+ ++   G  V+C D    R++L ++K+                         + +TYG SS  D  A  V  +    S +    +G  L +IS  +PG HNVLN++A IA  L L           + ++   S+F GV RRF + G   G  + DD+ HHP E++A L AAR  +P + ++AVFQPH Y+R   L  +F  A + AD ++++ VYA  E  + G   +R S  I+ H
Sbjct:  161 ADESDGSFLVLSPTIAVVTNIDADHLDHYSGGIEEIKDTFVKFINKVPFYGMAVLCLDDPNIRAILPRVKK-------------------------RYMTYGLSSQADIRATHVRHDGFTTS-FTAHFKGYRLGEISFTMPGAHNVLNAMACIAVALEL-------DVPFSAIQEGFSRFGGVGRRFTIKGEPRGITVVDDYGHHPAEIKATLAAARLGWPERRIVAVFQPHRYTRTHELFGEFVTAFYDADVLILTDVYAAGEQPVEGATAERLSQEILRH 409          
The following BLAST results are available for this feature:
BLAST of EY650172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MURC_CLOBH4.591e-3231.84UDP-N-acetylmuramate--L-alanine ligase OS=Clostrid... [more]
MURC_CLOB14.591e-3231.84UDP-N-acetylmuramate--L-alanine ligase OS=Clostrid... [more]
MURC_MYCS25.995e-3236.43UDP-N-acetylmuramate--L-alanine ligase OS=Mycobact... [more]
MURC_CLOBM5.995e-3232.35UDP-N-acetylmuramate--L-alanine ligase OS=Clostrid... [more]
MURC_CLOBK5.995e-3231.46UDP-N-acetylmuramate--L-alanine ligase OS=Clostrid... [more]
MURC_CLOB67.830e-3231.46UDP-N-acetylmuramate--L-alanine ligase OS=Clostrid... [more]
MURC_GEOSM1.336e-3133.71UDP-N-acetylmuramate--L-alanine ligase OS=Geobacte... [more]
MURC_GEOMG1.336e-3132.09UDP-N-acetylmuramate--L-alanine ligase OS=Geobacte... [more]
MURC_CLONN1.336e-3131.84UDP-N-acetylmuramate--L-alanine ligase OS=Clostrid... [more]
MURC_PELPD1.744e-3133.33UDP-N-acetylmuramate--L-alanine ligase OS=Pelobact... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-A10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650172 ID=EY650172; Name=EY650172; organism=Citrus sinensis; type=EST; length=911bp
CTGGTTACAACCCCAGCTACCGGNNCCTGTTTTAACCCGNTCGACCCACG
CGTCCGGGCCGTCGAATATGATGGTTTCTTACTGGGCCTATCACCCTCTG
TAGCTGTAGTGACAAATCTGGATTGGGAGCATGTTGATATCTTTGAAGAT
GAGGATGCTGTTAAAAGTATTTTTAGGAGATTCCTGAAGCAGATCAGGGT
GGGTGGACATCTTGTCATATGCGGGGACAGTCAATGTGCACGGTCCTTGC
TGGATCAAATAAAACAAGATACTGGATTGAAGTATTCTGGTGGAGTGGTT
TCTAATCAAAGTTCAGATCTATGGGGACAAGGGCATGATTACAAAATAAT
AACTTATGGTTTTTCAAGTTTTAATGATTGGTACGCTGAATCCGTTTGTC
CAAATGTACAGGGTGGTAGTGATTATATTTTGTGTGAGAGAGGGCGCCCA
TTGGCTCAGATCAGTTTACAAATTCCAGGAGTTCATAATGTCTTGAATTC
ATTAGCAGTAATTGCCACAGTCCTAACATTGATTGGAGACAAAAGACAAT
CACATGAATCAATTGCTTGTTTAAAGTTGCCTTTAAGCAAGTTCATGGGT
GTTTCTAGACGTTTTGATTTGATTGGAACAATATATGGATGCCATATATA
CGATGATTTTGCACACCATCCAACAGAAGTTCGTGCAGTTCTTCAAGCAG
CTCGTCAGAGATTTCCAAATAAGGCTCTTATTGCGGTATTCCAGCCTCAT
ACTTACAGTCGTCTAGTAGTATTGAAAGATGACTTTGCCAATGCACTTTT
CTGAGCCGATCAAGTTGTGGTTTCAGCGGTCTATGCTGNCAGAGAAACTA
TGATTGGATATCAATGGAAAAGATTTAGCTGCTTCATAATTGGCCACCAT
CCGAGGAATGT
back to top