EY650172

Overview
NameEY650172
Unique NameEY650172
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_CLOB8 (UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=murC PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.290e-30
Identity = 83/267 (31.09%), Postives = 129/267 (48.31%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMIG 858
            A EY    L   P V ++ N+D +H+D ++D D +   F +F + I   G+LV   D Q    +L +   +T                         ++YGFS   +  A+++  N  G + + + + G  L  I+L +PG HN+LN+LA I   L         + S  C+   LS   G  +RF+  G + G  + DD+AHHPTE++A L  A+Q   NK    +FQPHTY+R   L D+F      AD++++  +YA RE   G
Sbjct:  167 ACEYKRSFLKFPPYVGIILNIDSDHLDYYKDIDEIADTFLQFSRLIPEDGYLVGYADDQRVNEILSETNCNT-------------------------LSYGFSDNANLTAKNIHFNTNGCATFDVYKDGNNLFNITLNVPGKHNILNALASICVSLIF-------NISNDCIIEGLSNCKGAHKRFEYKGKLNGVTVIDDYAHHPTEIKATLSTAKQMNHNKT-YCIFQPHTYTRTKALFDEFTECFNDADELILMDIYAAREKNTG 400          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_GEOLS (UDP-N-acetylmuramate--L-alanine ligase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=murC PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.612e-30
Identity = 89/268 (33.21%), Postives = 132/268 (49.25%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            A E DG  L LSP++AVVTN+D +H+D +    + +K  F  F+ ++   G  V+C + +    ++ +IK+                         + +TYG SS  D  A  V   + G  + +    +G  L +IS  +PG HNVLN+LA  A  L L     +  E  A       +F GV RRF + G   G  + DD+ HHP E+RA L AAR  +P + L+  FQPH YSR   L ++F    + AD +V++ +YA  E  I
Sbjct:  161 ADESDGSFLTLSPTIAVVTNIDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKK-------------------------RFMTYGLSSQADLRATHV--KLDGFQTTFTAHYKGYRLGEISFNMPGAHNVLNALACTAVALELDVPFDKIQEGFA-------QFGGVGRRFTVKGEKNGIMVVDDYGHHPAEIRATLGAARNGWPERRLVVAFQPHRYSRTKELFNEFVTCFYDADVLVLTDIYAASEQPI 394          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_DICT6 (UDP-N-acetylmuramate--L-alanine ligase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=murC PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.612e-30
Identity = 86/265 (32.45%), Postives = 141/265 (53.21%), Query Frame = 1
Query:   64 EYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            E DG +L L+P + VVTN+D +H+D +E+ + +KS F + ++++   G++++  D +  R ++ +IK                        D K  TYGFS+  D+ A+++  N   GS++ +  R   L ++ L++PG HN+LNSL+ I     L  D  Q+ ++       L KF GV RR    G I     ++DD+ HHPTE+ A L+    R  N+ L+ VFQPH Y+R   L  + A+AL  +D V++  +Y+  E  I
Sbjct:  162 ESDGSILKLNPYILVVTNIDNDHLDYYENIENIKSTFLKVIEKVPEDGYVLLNLDCKNIRDIIGKIK------------------------DKKYYTYGFSN-ADFTADNIVLN-SSGSEFDVYFRNVKLGRVKLKVPGRHNILNSLSAIGISYILGLDFEQTIKA-------LEKFHGVQRRIQFKGVIENDVLVFDDYGHHPTEILATLETL--RLYNRRLVVVFQPHRYTRTYFLSKEIADALSLSDVVILMEIYSAGEKPI 391          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_BDEBA (UDP-N-acetylmuramate--L-alanine ligase OS=Bdellovibrio bacteriovorus GN=murC PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.612e-30
Identity = 82/266 (30.83%), Postives = 124/266 (46.62%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            A E DG    LSP +A++TN+D +H++ F+  + V+  F  F  ++   G +++CGD    R + +   +                         +I+ YGF   ND        +     +  L      + +  L++PG HN LN++A I   +              C K  L ++ GV RRF   G   G  +YDD+ HHPTEVRAVLQA R+++P + L+  FQPH YSR      DF  A   ADQV+++ +Y   E  I
Sbjct:  161 ADESDGSFHKLSPEIAIITNIDSDHLEHFKTFENVQKSFHDFALKVPFYGKVIVCGDDPLVRQIFENFPK-------------------------RILFYGFDEKNDLVVTGEHGHYAVHRNDRLLGTKHLVGEFDLKVPGRHNALNAVAAICAGVAA------GIPFATCAK-GLQRYEGVDRRFHFKGEKKGIKVYDDYGHHPTEVRAVLQAFREKYPKQRLVVFFQPHRYSRTQHCWHDFTTAFMEADQVLLTDIYPAGEAPI 394          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_STRA3 (UDP-N-acetylmuramate--L-alanine ligase OS=Streptococcus agalactiae serotype III GN=murC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 88/259 (33.98%), Postives = 131/259 (50.58%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVY 834
            A EY+   +   P  +++TN+D++H D F   + V + F  + KQ++ G  L I G+     S L +I     + Y                       YGF   ND+ A+ +   V G SD+ +      + Q  +   G HN+LN+ AVIA +  +  D       +A +   L  F GV RRF     I    I DDFAHHPTE+ A L AARQ++P+K ++A+FQPHT++R + L DDFA+AL  AD V ++ +Y
Sbjct:  153 ADEYERHFMPYHPEYSIITNIDFDHPDYFTGLEDVFNAFNDYAKQVQKG--LFIYGED----SKLHEITSKAPIYY-----------------------YGFEDSNDFIAKDITRTVNG-SDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGID-------MALVAEHLKTFSGVKRRFTE-KIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIY 373          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_NITHX (UDP-N-acetylmuramate--L-alanine ligase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=murC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 97/275 (35.27%), Postives = 136/275 (49.45%), Query Frame = 1
Query:   52 VRAVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            V A E DG  L L   VA+VTN+D EH+D F+  DAV+  FR F++ +   G  V+C D    +S++ +I+                        D +I+TYG +   D     + PN  GGS + +  R R       ++ + L +PG HN LN+ A IA    L I D        A ++  ++ F GV RRF   G   G  I DD+ HHP E+ AVL+AAR+    K ++AV QPH Y+RL  L ++F      AD VVV+ VY   E  I
Sbjct:  161 VEADESDGTFLKLPTDVAIVTNVDPEHLDHFKTFDAVQDAFRSFVENVPFYGFAVMCIDHPVVQSMVGRIE------------------------DRRIVTYGENPQADARLVDLAPN-GGGSHFKVVFRNRKTDAAHEVSDLVLPMPGRHNALNATAAIAVAHELGIPD--------ATIRKAIAAFGGVKRRFTKTGEWNGVTIIDDYGHHPVEIAAVLKAARESTGGK-VVAVVQPHRYTRLQSLFEEFCTCFNDADTVVVAEVYPAGEAPI 401          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_METRJ (UDP-N-acetylmuramate--L-alanine ligase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=murC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 99/275 (36.00%), Postives = 133/275 (48.36%), Query Frame = 1
Query:   52 VRAVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRP-----LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            V A E DG  L L   VA+VTN+D EH+D F   DA+K  FRRF+  I   G  V+C D    +                        DL G   D +IITYG +   D     +  +++GG     ++    RP     +  + L +PG HN LN+ A +A V   +G K  +      ++  L+ F GV RRF   G   G  I+DD+ HHP E++AVL+AAR       +IAV QPH Y+RL  L DDF      AD V+V+ VYA  E  I
Sbjct:  161 VEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPVVQ------------------------DLVGHIEDRRIITYGENPQAD--VRLIDVDLRGGQSRFRVMIRDRRPGYRMEMEDLVLPMPGKHNALNATAALA-VAHELGVKPDA------IRQALAGFGGVKRRFTRTGEWNGATIFDDYGHHPVEIKAVLKAARAS-TEHGVIAVVQPHRYTRLQSLFDDFCTCFNDADTVIVAPVYAAGEQPI 401          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_DESRM (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfotomaculum reducens (strain MI-1) GN=murC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 91/263 (34.60%), Postives = 132/263 (50.19%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRE 846
            A E DG  L L P++AVVTN++ +H+D +   + +   FR+FL ++   G  VIC D    + +       TGL     VV+  S    G G DY+I      +            V  G  Y   ER   L  + L +PG HN+LN++A +A     IG  R  +     +   L KF G  RRF +IG + G  + DD+AHHPTEV+A LQAAR   P + ++ +FQPH YSR   L  +F  +    D ++++ +YA  E
Sbjct:  165 ADESDGSFLLLDPNIAVVTNIEDDHLDYYGTRENIAKAFRQFLAKLSAEGLAVICLDDPVLKEIT------TGLTCQ--VVTYGSL---GSGADYQIKVLETRN-----------GVNQGEVYFQEER---LGMLELHVPGYHNLLNAMAAVA-----IG--RHLNLDFEKIARALRKFTGAKRRFQVIGKVNGITVVDDYAHHPTEVKATLQAARTSHPGR-IVTIFQPHRYSRTKQLFKEFGQSFTNGDLIILTDIYAASE 394          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_DESPS (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfotalea psychrophila GN=murC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 85/266 (31.95%), Postives = 132/266 (49.62%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            A E DG  L LSP + VVTN+D EH+D + D + +K  F  F+ +I   G  ++C D +   ++L Q+++                         ++ITYG +   D  A+++     G S + +   G  L +IS+   G HNV N+LA +A  L L             +   L+ F GV RR    G   G  + DD+AHHPTE+RA L+A ++ +P K L+ +FQPH YSR   L ++F      AD ++++ +Y   E+ I
Sbjct:  162 ADESDGSFLKLSPVLEVVTNIDLEHLDYYTDIEHIKETFLSFIDKIPFYGAAIVCLDDENVAAILPQVQK-------------------------RLITYGLTPQADVSADNL-RFAAGRSTFRVRAAGEVLGEISVFPSGTHNVYNALAAVAIGLEL-------EIPFGKIATALASFGGVQRRMQHKGEGKGITVIDDYAHHPTEIRASLKAIKETWPEKRLVVLFQPHRYSRTQALFEEFKTCFHQADCLIMTDIYEASESPI 394          
BLAST of EY650172 vs. ExPASy Swiss-Prot
Match: MURC_BRAHW (UDP-N-acetylmuramate--L-alanine ligase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=murC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 89/269 (33.09%), Postives = 133/269 (49.44%), Query Frame = 1
Query:   58 AVEYDGFLLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC-ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALF*ADQVVVSAVYAXRETMI 855
            A E DG  L LSP + VVTN+D +H+D + + +A++  F  F+ ++   G   +C +    + L                          +  + K  +YGFS   D+Y +     V+    Y         L + S+ + G+HNVLNSLA I   + L  D       IA +K  L  F GV RR   +  +Y   I  +DD+AHHPTE++A L + R  + N+ +IAVFQPH YSR  +L +DF  A   AD+V++S +YA  E+ I
Sbjct:  165 ADESDGSFLRLSPVINVVTNIDNDHLDYYGNVEALRVAFLEFINKVPFYGCSFLCFEDNVVKDL-------------------------SKSANKKYYSYGFSKDYDFYVDRDSIRVEAPITYFTAYHNSECLGEFSVPLIGIHNVLNSLASIGVGIHLGID-------IADIKEGLKTFEGVGRR---LNKLYDKEITLFDDYAHHPTEIKATLSSVRNAYKNRRIIAVFQPHRYSRTELLLNDFEYAFNDADEVIISDIYAAGESPI 398          
The following BLAST results are available for this feature:
BLAST of EY650172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MURC_CLOB83.290e-3031.09UDP-N-acetylmuramate--L-alanine ligase OS=Clostrid... [more]
MURC_GEOLS5.612e-3033.21UDP-N-acetylmuramate--L-alanine ligase OS=Geobacte... [more]
MURC_DICT65.612e-3032.45UDP-N-acetylmuramate--L-alanine ligase OS=Dictyogl... [more]
MURC_BDEBA5.612e-3030.83UDP-N-acetylmuramate--L-alanine ligase OS=Bdellovi... [more]
MURC_STRA37.329e-3033.98UDP-N-acetylmuramate--L-alanine ligase OS=Streptoc... [more]
MURC_NITHX7.329e-3035.27UDP-N-acetylmuramate--L-alanine ligase OS=Nitrobac... [more]
MURC_METRJ7.329e-3036.00UDP-N-acetylmuramate--L-alanine ligase OS=Methylob... [more]
MURC_DESRM7.329e-3034.60UDP-N-acetylmuramate--L-alanine ligase OS=Desulfot... [more]
MURC_DESPS7.329e-3031.95UDP-N-acetylmuramate--L-alanine ligase OS=Desulfot... [more]
MURC_BRAHW7.329e-3033.09UDP-N-acetylmuramate--L-alanine ligase OS=Brachysp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-A10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650172 ID=EY650172; Name=EY650172; organism=Citrus sinensis; type=EST; length=911bp
CTGGTTACAACCCCAGCTACCGGNNCCTGTTTTAACCCGNTCGACCCACG
CGTCCGGGCCGTCGAATATGATGGTTTCTTACTGGGCCTATCACCCTCTG
TAGCTGTAGTGACAAATCTGGATTGGGAGCATGTTGATATCTTTGAAGAT
GAGGATGCTGTTAAAAGTATTTTTAGGAGATTCCTGAAGCAGATCAGGGT
GGGTGGACATCTTGTCATATGCGGGGACAGTCAATGTGCACGGTCCTTGC
TGGATCAAATAAAACAAGATACTGGATTGAAGTATTCTGGTGGAGTGGTT
TCTAATCAAAGTTCAGATCTATGGGGACAAGGGCATGATTACAAAATAAT
AACTTATGGTTTTTCAAGTTTTAATGATTGGTACGCTGAATCCGTTTGTC
CAAATGTACAGGGTGGTAGTGATTATATTTTGTGTGAGAGAGGGCGCCCA
TTGGCTCAGATCAGTTTACAAATTCCAGGAGTTCATAATGTCTTGAATTC
ATTAGCAGTAATTGCCACAGTCCTAACATTGATTGGAGACAAAAGACAAT
CACATGAATCAATTGCTTGTTTAAAGTTGCCTTTAAGCAAGTTCATGGGT
GTTTCTAGACGTTTTGATTTGATTGGAACAATATATGGATGCCATATATA
CGATGATTTTGCACACCATCCAACAGAAGTTCGTGCAGTTCTTCAAGCAG
CTCGTCAGAGATTTCCAAATAAGGCTCTTATTGCGGTATTCCAGCCTCAT
ACTTACAGTCGTCTAGTAGTATTGAAAGATGACTTTGCCAATGCACTTTT
CTGAGCCGATCAAGTTGTGGTTTCAGCGGTCTATGCTGNCAGAGAAACTA
TGATTGGATATCAATGGAAAAGATTTAGCTGCTTCATAATTGGCCACCAT
CCGAGGAATGT
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