EY650170

Overview
NameEY650170
Unique NameEY650170
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACC3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain 03BB102) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACC2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain G9842) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACC0 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain AH820) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACAN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACAH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACAC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACAA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain A0248) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_ACIBL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acidobacteria bacterium (strain Ellin345) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-40
Identity = 79/156 (50.64%), Postives = 106/156 (67.95%), Query Frame = 2 
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            RVG GFD H    G PL IGG+ +PH  G   HSDGDVLLH + DA+LGA+   DIG  FP SDPKWKGA S VFI+EA+R ++ AGY +GN+D +L+L  PK+ P+ + I+ ++++LL  +PT V +KAKT E  +  G   +  AH V+LL K+
Sbjct:    3 RVGLGFDSHEFREGIPLRIGGLTIPHTHGLSGHSDGDVLLHAITDALLGAVAAGDIGAFFPPSDPKWKGANSVVFIEEAMRHIETAGYRVGNVDCSLVLNAPKIGPHAKAIQESVAKLLKIEPTAVGIKAKTPEGLNLDG---TALAHVVVLLEKR 155
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.092e-39
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGG+ +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGVTIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACC4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispF PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.426e-39
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 2 
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK    G +  IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWGFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
The following BLAST results are available for this feature:
BLAST of EY650170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_BACC38.361e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC28.361e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC08.361e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAN8.361e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAH8.361e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAC8.361e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAA8.361e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ACIBL8.361e-4050.642-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC11.092e-3949.042-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC41.426e-3949.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-A08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650170 ID=EY650170; Name=EY650170; organism=Citrus sinensis; type=EST; length=957bp
GGGNCCGTTTTTACGCCCCGACCCACGCGTCCGTACATACCTAGCAGACA
GCATTTCACGAACAGCGCCTCTCCTCTCTTCGTAAAATTAGATGGTGTTG
ACGATGGCCGCTCAATCATACACCACCACTCCTCTCCACAGCAAAATTAC
GAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCCTCGTAGCTTAA
CCGCCAAACATCTCCGCACAACACAGTCAACGTCGCTGCCTCGTATTTCA
GTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAAGAGTCATCGGCTTC
GATCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGTGGGCCACGGGT
TTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCATCGGTGGAATC
AATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGACGGTGATGTTTT
GCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGGTCTTCCTGATA
TTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGGGTGCACCATCC
TCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAGGCCGGCTATGA
GATTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACCAAAATTGAGCC
CATACAATGAGACTATCCGAACCAACTTGTCTGAACTGCTANGAGCAGAC
CCCACCGTTGTAAATCTGAAAGCGAAAACTCATGAAAAAGNTGATAGCCC
TGGTGAAAAATCGAGTATTGCAGCTCACACTGTGATCCTTCTCATGAAGA
AGTAAATAAACGATTTGGGAATTGTCTNAATGTAGCAGNTGNATCCTATT
ATCATTGGTGGATTGNATTCTGCTTACAAGACTATTACTGGGATAGATTC
CATGATAGGTGTNGTTCATACTTACATGCTTCAGTATGGCAGGTCTTNAC
TAAAAAA
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